RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 ADAMTS9Q9P2N4 1935 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 GGT3PA6NGU5 568 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 TVP23AA6NH52 213 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 HMSDA8MTL9 139 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 IGKV3-11P04433 115 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 ALDOBP05062 364 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 CSF2RBP32927 897 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 DLX5P56178 289 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 HLA-BQ31612 363 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 SLC36A1Q7Z2H8 476 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 COMMD7Q86VX2 200 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 CEP76Q8TAP6 659 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 ADIPOR1Q96A54 375 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 SLC41A2Q96JW4 573 aa15.13■□□□□ 0.01
CMTM3-213ENST00000566756 NECAB3Q96P71 396 aaPredicted RBP15.13■□□□□ 0.01
CMTM3-213ENST00000566756 A0A087WV48 116 aa15.12■□□□□ 0.01
CMTM3-213ENST00000566756 UBE2QL1A1L167 161 aa15.12■□□□□ 0.01
CMTM3-213ENST00000566756 OR2W5A6NFC9 320 aa15.12■□□□□ 0.01
CMTM3-213ENST00000566756 TMEM150CB9EJG8 249 aa15.12■□□□□ 0.01
CMTM3-213ENST00000566756 M0R296 226 aa15.12■□□□□ 0.01
CMTM3-213ENST00000566756 TOX3O15405 576 aaPredicted RBP15.12■□□□□ 0.01
CMTM3-213ENST00000566756 CTAG2O75638 210 aa15.12■□□□□ 0.01
CMTM3-213ENST00000566756 MELTFP08582 738 aa15.12■□□□□ 0.01
CMTM3-213ENST00000566756 ROM1Q03395 351 aa15.12■□□□□ 0.01
CMTM3-213ENST00000566756 POU4F3Q15319 338 aa15.12■□□□□ 0.01
CMTM3-213ENST00000566756 TEX30Q5JUR7 227 aa15.12■□□□□ 0.01
CMTM3-213ENST00000566756 FAM198BQ6UWH4 519 aa15.12■□□□□ 0.01
CMTM3-213ENST00000566756 MAMDC2Q7Z304 686 aaPredicted RBP15.12■□□□□ 0.01
CMTM3-213ENST00000566756 TMEM151BQ8IW70 566 aa15.12■□□□□ 0.01
CMTM3-213ENST00000566756 DTWD2Q8NBA8 298 aa15.12■□□□□ 0.01
CMTM3-213ENST00000566756 OR6N1Q8NGY5 312 aa15.12■□□□□ 0.01
CMTM3-213ENST00000566756 MVB12AQ96EY5 273 aa15.12■□□□□ 0.01
CMTM3-213ENST00000566756 SYT4Q9H2B2 425 aa15.12■□□□□ 0.01
CMTM3-213ENST00000566756 MED9Q9NWA0 146 aa15.12■□□□□ 0.01
CMTM3-213ENST00000566756 KCNN3Q9UGI6 736 aa15.12■□□□□ 0.01
CMTM3-213ENST00000566756 TMA7Q9Y2S6 64 aaKnown RBP15.12■□□□□ 0.01
CMTM3-213ENST00000566756 ADAMTS20P59510 1910 aa15.12■□□□□ 0.01
CMTM3-213ENST00000566756 COL5A1P20908 1838 aaPredicted RBP15.11■□□□□ 0.01
CMTM3-213ENST00000566756 IGKV3D-11A0A0A0MRZ8 115 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 SULT1C2O00338 296 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 SLC17A2O00624 439 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 XKRYO14609 159 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 TO15178 435 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 CD37P11049 281 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 ANXA7P20073 488 aaKnown RBP15.11■□□□□ 0.01
CMTM3-213ENST00000566756 NFYAP23511 347 aaPredicted RBP15.11■□□□□ 0.01
CMTM3-213ENST00000566756 CXCR1P25024 350 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 KIR3DL2P43630 455 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 SLC17A1Q14916 467 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 NR0B2Q15466 257 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 MPPED2Q15777 294 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 SGCBQ16585 318 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 NHLRC3Q5JS37 347 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 ADGRG3Q86Y34 549 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 ZNF679Q8IYX0 411 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 TMEM105Q8N8V8 129 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 RNF128Q8TEB7 428 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 CDV3Q9UKY7 258 aaKnown RBP15.11■□□□□ 0.01
CMTM3-213ENST00000566756 ZSCAN5BA6NJL1 495 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 ALG1L2C9J202 215 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 TOXO94900 526 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 CFDP00746 253 aaPredicted RBP15.11■□□□□ 0.01
CMTM3-213ENST00000566756 IGHMP01871 453 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 MAS1P04201 325 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 ARL4DP49703 201 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 ZNF117Q03924 483 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 AANATQ16613 207 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 PCGF3Q3KNV8 242 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 WDR38Q5JTN6 314 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 FAM166AQ6J272 317 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 LRRC20Q8TCA0 184 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 PNPLA2Q96AD5 504 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 ALX4Q9H161 411 aaPredicted RBP15.11■□□□□ 0.01
CMTM3-213ENST00000566756 CA10Q9NS85 328 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 VSX1Q9NZR4 365 aaPredicted RBP15.11■□□□□ 0.01
CMTM3-213ENST00000566756 B9D1Q9UPM9 204 aa15.11■□□□□ 0.01
CMTM3-213ENST00000566756 LOC100289279A0A1B0GTE1 492 aa15.1■□□□□ 0.01
CMTM3-213ENST00000566756 A0A1W2PPL8 197 aa15.1■□□□□ 0.01
CMTM3-213ENST00000566756 CIB4A0PJX0 185 aa15.1■□□□□ 0.01
CMTM3-213ENST00000566756 MCRIP1C9JLW8 97 aa15.1■□□□□ 0.01
CMTM3-213ENST00000566756 H7C1C5 153 aa15.1■□□□□ 0.01
CMTM3-213ENST00000566756 PYCARD-AS1I3L0S3 204 aa15.1■□□□□ 0.01
CMTM3-213ENST00000566756 I3L521 148 aa15.1■□□□□ 0.01
CMTM3-213ENST00000566756 L7N2F9 121 aa15.1■□□□□ 0.01
CMTM3-213ENST00000566756 AKAIN1P0CW23 69 aa15.1■□□□□ 0.01
CMTM3-213ENST00000566756 TMIGD3P0DMS9 266 aaPredicted RBP15.1■□□□□ 0.01
CMTM3-213ENST00000566756 PGCP20142 388 aa15.1■□□□□ 0.01
CMTM3-213ENST00000566756 RPL27P61353 136 aaKnown RBP15.1■□□□□ 0.01
CMTM3-213ENST00000566756 LCN6P62502 163 aa15.1■□□□□ 0.01
CMTM3-213ENST00000566756 BAMBIQ13145 260 aa15.1■□□□□ 0.01
CMTM3-213ENST00000566756 ELAVL1Q15717 326 aaKnown RBP15.1■□□□□ 0.01
CMTM3-213ENST00000566756 B3GNTL1Q67FW5 361 aaPredicted RBP15.1■□□□□ 0.01
CMTM3-213ENST00000566756 SLC18B1Q6NT16 456 aa15.1■□□□□ 0.01
CMTM3-213ENST00000566756 TMEM71Q6P5X7 295 aa15.1■□□□□ 0.01
CMTM3-213ENST00000566756 C3P1Q6ZMU1 363 aa15.1■□□□□ 0.01
CMTM3-213ENST00000566756 OR4C16Q8NGL9 310 aa15.1■□□□□ 0.01
CMTM3-213ENST00000566756 ZNF519Q8TB69 540 aa15.1■□□□□ 0.01
CMTM3-213ENST00000566756 ZNF721Q8TF20 911 aa15.1■□□□□ 0.01
CMTM3-213ENST00000566756 ZNF524Q96C55 264 aa15.1■□□□□ 0.01
CMTM3-213ENST00000566756 CHIAQ9BZP6 476 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms