RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 AGAP6Q5VW22 663 aa12.02□□□□□ -0.49
HERPUD1-210ENST00000565966 ZNF544Q6NX49 715 aa12.02□□□□□ -0.49
HERPUD1-210ENST00000565966 RASSF6Q6ZTQ3 369 aa12.02□□□□□ -0.49
HERPUD1-210ENST00000565966 DTX2Q86UW9 622 aa12.02□□□□□ -0.49
HERPUD1-210ENST00000565966 MDP1Q86V88 176 aa12.02□□□□□ -0.49
HERPUD1-210ENST00000565966 FBXL14Q8N1E6 418 aa12.02□□□□□ -0.49
HERPUD1-210ENST00000565966 SLC22A24Q8N4F4 322 aa12.02□□□□□ -0.49
HERPUD1-210ENST00000565966 IL17RDQ8NFM7 739 aa12.02□□□□□ -0.49
HERPUD1-210ENST00000565966 FNDC8Q8TC99 324 aa12.02□□□□□ -0.49
HERPUD1-210ENST00000565966 GIPC3Q8TF64 312 aa12.02□□□□□ -0.49
HERPUD1-210ENST00000565966 HTRA1Q92743 480 aa12.02□□□□□ -0.49
HERPUD1-210ENST00000565966 GTPBP3Q969Y2 492 aaKnown RBP12.02□□□□□ -0.49
HERPUD1-210ENST00000565966 TRMT61AQ96FX7 289 aaKnown RBP12.02□□□□□ -0.49
HERPUD1-210ENST00000565966 DUS3LQ96G46 650 aaKnown RBP12.02□□□□□ -0.49
HERPUD1-210ENST00000565966 SAMD8Q96LT4 415 aa12.02□□□□□ -0.49
HERPUD1-210ENST00000565966 TRAF4Q9BUZ4 470 aaPredicted RBP12.02□□□□□ -0.49
HERPUD1-210ENST00000565966 TMUB1Q9BVT8 246 aa12.02□□□□□ -0.49
HERPUD1-210ENST00000565966 DENND2DQ9H6A0 471 aaPredicted RBP12.02□□□□□ -0.49
HERPUD1-210ENST00000565966 EGLN3Q9H6Z9 239 aa12.02□□□□□ -0.49
HERPUD1-210ENST00000565966 TMEM38BQ9NVV0 291 aa12.02□□□□□ -0.49
HERPUD1-210ENST00000565966 ZNF224Q9NZL3 707 aa12.02□□□□□ -0.49
HERPUD1-210ENST00000565966 UGT2A1Q9Y4X1 527 aa12.02□□□□□ -0.49
HERPUD1-210ENST00000565966 CDH10Q9Y6N8 788 aa12.02□□□□□ -0.49
HERPUD1-210ENST00000565966 CHD3Q12873 2000 aaKnown RBP12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 FLNAP21333 2647 aaKnown RBP12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 SLC22A23A1A5C7 686 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 PRSS37A4D1T9 235 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 ARRDC5A6NEK1 342 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 ATP6V1G2-DDX39BF2Z307 99 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 SOCS2O14508 198 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 XKRYO14609 159 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 IMPA2O14732 288 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 ARPC3O15145 178 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 MGRN1O60291 552 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 UBL3O95164 117 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 FARS2O95363 451 aaKnown RBP12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 HLA-HP01893 362 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 OR8G3PP0DMU2 310 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 CD99P14209 185 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 APOBEC3AP31941 199 aaPredicted RBP12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 CDAP32320 146 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 IDH3GP51553 393 aaPredicted RBP12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 MRPS34P82930 218 aaKnown RBP12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 PIGFQ07326 219 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 NPRL3Q12980 569 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 GSG1Q2KHT4 349 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 NRN1LQ496H8 165 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 Q5PR19 223 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 B3GLCTQ6Y288 498 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 KRTAP1-3Q8IUG1 177 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 SKA3Q8IX90 412 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 MUC15Q8N387 334 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 WFDC11Q8NEX6 87 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 FGFBP3Q8TAT2 258 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 NSMAFQ92636 917 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 ERMAPQ96PL5 475 aaPredicted RBP12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 FEVQ99581 238 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 SH3GL3Q99963 347 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 NIPSNAP1Q9BPW8 284 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 IFT27Q9BW83 186 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 NTN4Q9HB63 628 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 NOX3Q9HBY0 568 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 CBLN4Q9NTU7 201 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 ARMC1Q9NVT9 282 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 IL20Q9NYY1 176 aa12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 PDP1Q9P0J1 537 aaPredicted RBP12.01□□□□□ -0.49
HERPUD1-210ENST00000565966 AHCYL1O43865 530 aa12□□□□□ -0.49
HERPUD1-210ENST00000565966 DEAF1O75398 565 aaPredicted RBP12□□□□□ -0.49
HERPUD1-210ENST00000565966 E2F6O75461 281 aa12□□□□□ -0.49
HERPUD1-210ENST00000565966 TP53P04637 393 aaPredicted RBP12□□□□□ -0.49
HERPUD1-210ENST00000565966 IGFBP1P08833 259 aaPredicted RBP12□□□□□ -0.49
HERPUD1-210ENST00000565966 CELA3BP08861 270 aa12□□□□□ -0.49
HERPUD1-210ENST00000565966 PATE4P0C8F1 98 aa12□□□□□ -0.49
HERPUD1-210ENST00000565966 GSTM3P21266 225 aa12□□□□□ -0.49
HERPUD1-210ENST00000565966 CDKN1AP38936 164 aa12□□□□□ -0.49
HERPUD1-210ENST00000565966 CDKN2AP42771 156 aaKnown RBP12□□□□□ -0.49
HERPUD1-210ENST00000565966 PTDSS1P48651 473 aaKnown RBP12□□□□□ -0.49
HERPUD1-210ENST00000565966 ATP5J2P56134 94 aa12□□□□□ -0.49
HERPUD1-210ENST00000565966 RAB1AP62820 205 aa12□□□□□ -0.49
HERPUD1-210ENST00000565966 RPL13AP3Q6NVV1 102 aa12□□□□□ -0.49
HERPUD1-210ENST00000565966 CD300LDQ6UXZ3 194 aa12□□□□□ -0.49
HERPUD1-210ENST00000565966 FOXL2NBQ6ZUU3 175 aa12□□□□□ -0.49
HERPUD1-210ENST00000565966 PTCHD4Q6ZW05 846 aa12□□□□□ -0.49
HERPUD1-210ENST00000565966 YTHDF3Q7Z739 585 aaKnown RBP12□□□□□ -0.49
HERPUD1-210ENST00000565966 ADCK1Q86TW2 530 aa12□□□□□ -0.49
HERPUD1-210ENST00000565966 MYPOPQ86VE0 399 aaPredicted RBP12□□□□□ -0.49
HERPUD1-210ENST00000565966 HS3ST5Q8IZT8 346 aa12□□□□□ -0.49
HERPUD1-210ENST00000565966 OR4F15Q8NGB8 312 aa12□□□□□ -0.49
HERPUD1-210ENST00000565966 OR8D4Q8NGM9 314 aa12□□□□□ -0.49
HERPUD1-210ENST00000565966 NABP1Q96AH0 204 aa12□□□□□ -0.49
HERPUD1-210ENST00000565966 ZNF75AQ96N20 296 aa12□□□□□ -0.49
HERPUD1-210ENST00000565966 PLA2G12AQ9BZM1 189 aa12□□□□□ -0.49
HERPUD1-210ENST00000565966 SEC61A2Q9H9S3 476 aa12□□□□□ -0.49
HERPUD1-210ENST00000565966 VSX1Q9NZR4 365 aaPredicted RBP12□□□□□ -0.49
HERPUD1-210ENST00000565966 FBXL3Q9UKT7 428 aa12□□□□□ -0.49
HERPUD1-210ENST00000565966 AP4S1Q9Y587 144 aa12□□□□□ -0.49
HERPUD1-210ENST00000565966 BHLHE40O14503 412 aa11.99□□□□□ -0.49
HERPUD1-210ENST00000565966 IDH3BO43837 385 aa11.99□□□□□ -0.49
HERPUD1-210ENST00000565966 RAB36O95755 333 aa11.99□□□□□ -0.49
HERPUD1-210ENST00000565966 HIST1H1CP16403 213 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms