RNA–Protein interactions for RNA: ENST00000564815.5

COMMD4-211, Transcript of COMM domain containing 4, humanhuman

TSL 3 BASIC

Gene COMMD4, Length 639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-211ENST00000564815 LEF1Q9UJU2 399 aaPredicted RBP12.11□□□□□ -0.47
COMMD4-211ENST00000564815 TRIM33Q9UPN9 1127 aa12.11□□□□□ -0.47
COMMD4-211ENST00000564815 TRBV5-3A0A0A0MS03 114 aa12.1□□□□□ -0.47
COMMD4-211ENST00000564815 GMNCA6NCL1 334 aa12.1□□□□□ -0.47
COMMD4-211ENST00000564815 KPNA4O00629 521 aaPredicted RBP12.1□□□□□ -0.47
COMMD4-211ENST00000564815 AVPP01185 164 aa12.1□□□□□ -0.47
COMMD4-211ENST00000564815 ASAH2BP0C7U1 165 aa12.1□□□□□ -0.47
COMMD4-211ENST00000564815 ACADSP16219 412 aa12.1□□□□□ -0.47
COMMD4-211ENST00000564815 STOMP27105 288 aa12.1□□□□□ -0.47
COMMD4-211ENST00000564815 GDI2P50395 445 aaKnown RBP12.1□□□□□ -0.47
COMMD4-211ENST00000564815 ATP4BP51164 291 aa12.1□□□□□ -0.47
COMMD4-211ENST00000564815 ZMAT1Q5H9K5 638 aa12.1□□□□□ -0.47
COMMD4-211ENST00000564815 ARL9Q6T311 187 aa12.1□□□□□ -0.47
COMMD4-211ENST00000564815 C1orf229Q6ZS94 237 aaPredicted RBP12.1□□□□□ -0.47
COMMD4-211ENST00000564815 C10orf111Q8N326 155 aa12.1□□□□□ -0.47
COMMD4-211ENST00000564815 TSPAN32Q96QS1 320 aa12.1□□□□□ -0.47
COMMD4-211ENST00000564815 DIRC2Q96SL1 478 aa12.1□□□□□ -0.47
COMMD4-211ENST00000564815 GPA33Q99795 319 aa12.1□□□□□ -0.47
COMMD4-211ENST00000564815 WFDC6Q9BQY6 131 aa12.1□□□□□ -0.47
COMMD4-211ENST00000564815 CGGBP1Q9UFW8 167 aaPredicted RBP12.1□□□□□ -0.47
COMMD4-211ENST00000564815 ZDHHC8Q9ULC8 765 aa12.1□□□□□ -0.47
COMMD4-211ENST00000564815 SLC7A7Q9UM01 511 aa12.1□□□□□ -0.47
COMMD4-211ENST00000564815 NDUFAF1Q9Y375 327 aa12.1□□□□□ -0.47
COMMD4-211ENST00000564815 ISPDA4D126 451 aa12.09□□□□□ -0.47
COMMD4-211ENST00000564815 WIPF1O43516 503 aa12.09□□□□□ -0.47
COMMD4-211ENST00000564815 SPRY3O43610 288 aa12.09□□□□□ -0.47
COMMD4-211ENST00000564815 DEAF1O75398 565 aaPredicted RBP12.09□□□□□ -0.47
COMMD4-211ENST00000564815 FOXH1O75593 365 aa12.09□□□□□ -0.47
COMMD4-211ENST00000564815 FUT1P19526 365 aa12.09□□□□□ -0.47
COMMD4-211ENST00000564815 ARHGDIAP52565 204 aa12.09□□□□□ -0.47
COMMD4-211ENST00000564815 PCBP3P57721 371 aaKnown RBP12.09□□□□□ -0.47
COMMD4-211ENST00000564815 ERVS71-1P61550 626 aa12.09□□□□□ -0.47
COMMD4-211ENST00000564815 MRPS34P82930 218 aaKnown RBP12.09□□□□□ -0.47
COMMD4-211ENST00000564815 HIST3H3Q16695 136 aa12.09□□□□□ -0.47
COMMD4-211ENST00000564815 PABPC1L2AQ5JQF8 200 aa12.09□□□□□ -0.47
COMMD4-211ENST00000564815 SHISA2Q6UWI4 295 aa12.09□□□□□ -0.47
COMMD4-211ENST00000564815 ZER1Q7Z7L7 766 aa12.09□□□□□ -0.47
COMMD4-211ENST00000564815 LRRC17Q8N6Y2 441 aa12.09□□□□□ -0.47
COMMD4-211ENST00000564815 SYT14Q8NB59 555 aa12.09□□□□□ -0.47
COMMD4-211ENST00000564815 VANGL1Q8TAA9 524 aaPredicted RBP12.09□□□□□ -0.47
COMMD4-211ENST00000564815 FNDC8Q8TC99 324 aa12.09□□□□□ -0.47
COMMD4-211ENST00000564815 RBP7Q96R05 134 aa12.09□□□□□ -0.47
COMMD4-211ENST00000564815 ZNF347Q96SE7 839 aa12.09□□□□□ -0.47
COMMD4-211ENST00000564815 SLC6A7Q99884 636 aa12.09□□□□□ -0.47
COMMD4-211ENST00000564815 MRPL13Q9BYD1 178 aaKnown RBP12.09□□□□□ -0.47
COMMD4-211ENST00000564815 IKZF5Q9H5V7 419 aa12.09□□□□□ -0.47
COMMD4-211ENST00000564815 VIPAS39Q9H9C1 493 aa12.09□□□□□ -0.47
COMMD4-211ENST00000564815 INIPQ9NRY2 104 aa12.09□□□□□ -0.47
COMMD4-211ENST00000564815 PPIAL4EA0A075B759 164 aa12.08□□□□□ -0.48
COMMD4-211ENST00000564815 PPIAL4CA0A0B4J2A2 164 aa12.08□□□□□ -0.48
COMMD4-211ENST00000564815 C5orf49A4QMS7 147 aa12.08□□□□□ -0.48
COMMD4-211ENST00000564815 PPIAL4DF5H284 164 aa12.08□□□□□ -0.48
COMMD4-211ENST00000564815 ANGPT2O15123 496 aa12.08□□□□□ -0.48
COMMD4-211ENST00000564815 TRMUO75648 421 aaKnown RBP12.08□□□□□ -0.48
COMMD4-211ENST00000564815 PRSS23O95084 383 aa12.08□□□□□ -0.48
COMMD4-211ENST00000564815 MT-ND1P03886 318 aa12.08□□□□□ -0.48
COMMD4-211ENST00000564815 OPN1SWP03999 348 aa12.08□□□□□ -0.48
COMMD4-211ENST00000564815 F13BP05160 661 aa12.08□□□□□ -0.48
COMMD4-211ENST00000564815 MMP7P09237 267 aaPredicted RBP12.08□□□□□ -0.48
COMMD4-211ENST00000564815 PPIAL4FP0DN26 164 aa12.08□□□□□ -0.48
COMMD4-211ENST00000564815 PCBD1P61457 104 aa12.08□□□□□ -0.48
COMMD4-211ENST00000564815 GLO1Q04760 184 aa12.08□□□□□ -0.48
COMMD4-211ENST00000564815 SGCAQ16586 387 aa12.08□□□□□ -0.48
COMMD4-211ENST00000564815 AWAT1Q58HT5 328 aa12.08□□□□□ -0.48
COMMD4-211ENST00000564815 THEM4Q5T1C6 240 aa12.08□□□□□ -0.48
COMMD4-211ENST00000564815 C10orf128Q5T292 105 aa12.08□□□□□ -0.48
COMMD4-211ENST00000564815 DLEU7Q6UYE1 221 aa12.08□□□□□ -0.48
COMMD4-211ENST00000564815 NOXO1Q8NFA2 376 aa12.08□□□□□ -0.48
COMMD4-211ENST00000564815 TLCD1Q96CP7 247 aa12.08□□□□□ -0.48
COMMD4-211ENST00000564815 CGREF1Q99674 301 aa12.08□□□□□ -0.48
COMMD4-211ENST00000564815 CPPED1Q9BRF8 314 aaPredicted RBP12.08□□□□□ -0.48
COMMD4-211ENST00000564815 SMURF2Q9HAU4 748 aa12.08□□□□□ -0.48
COMMD4-211ENST00000564815 ELOVL3Q9HB03 270 aa12.08□□□□□ -0.48
COMMD4-211ENST00000564815 UBAP1Q9NZ09 502 aa12.08□□□□□ -0.48
COMMD4-211ENST00000564815 H3BSA7 217 aa12.07□□□□□ -0.48
COMMD4-211ENST00000564815 IGHV1-46P01743 117 aa12.07□□□□□ -0.48
COMMD4-211ENST00000564815 ADRA2CP18825 462 aa12.07□□□□□ -0.48
COMMD4-211ENST00000564815 TNFSF4P23510 183 aa12.07□□□□□ -0.48
COMMD4-211ENST00000564815 IFNA8P32881 189 aa12.07□□□□□ -0.48
COMMD4-211ENST00000564815 RBM34P42696 430 aaKnown RBP12.07□□□□□ -0.48
COMMD4-211ENST00000564815 UGT2B15P54855 530 aa12.07□□□□□ -0.48
COMMD4-211ENST00000564815 RPL18Q07020 188 aaKnown RBP12.07□□□□□ -0.48
COMMD4-211ENST00000564815 TAF11Q15544 211 aa12.07□□□□□ -0.48
COMMD4-211ENST00000564815 AGBL2Q5U5Z8 902 aa12.07□□□□□ -0.48
COMMD4-211ENST00000564815 MBNL2Q5VZF2 373 aaKnown RBP12.07□□□□□ -0.48
COMMD4-211ENST00000564815 DHDDSQ86SQ9 333 aa12.07□□□□□ -0.48
COMMD4-211ENST00000564815 PTOV1Q86YD1 416 aa12.07□□□□□ -0.48
COMMD4-211ENST00000564815 RBM45Q8IUH3 476 aaKnown RBP12.07□□□□□ -0.48
COMMD4-211ENST00000564815 GPR32P1Q8NGA4 272 aa12.07□□□□□ -0.48
COMMD4-211ENST00000564815 ASB10Q8WXI3 467 aa12.07□□□□□ -0.48
COMMD4-211ENST00000564815 POP5Q969H6 163 aaKnown RBP12.07□□□□□ -0.48
COMMD4-211ENST00000564815 SGTBQ96EQ0 304 aa12.07□□□□□ -0.48
COMMD4-211ENST00000564815 MARS2Q96GW9 593 aaKnown RBP12.07□□□□□ -0.48
COMMD4-211ENST00000564815 EBF4Q9BQW3 602 aa12.07□□□□□ -0.48
COMMD4-211ENST00000564815 ZNF426Q9BUY5 554 aa12.07□□□□□ -0.48
COMMD4-211ENST00000564815 ZNF747Q9BV97 191 aa12.07□□□□□ -0.48
COMMD4-211ENST00000564815 POLR2J2Q9GZM3 115 aaKnown RBP12.07□□□□□ -0.48
COMMD4-211ENST00000564815 PCDHAC1Q9H158 963 aa12.07□□□□□ -0.48
COMMD4-211ENST00000564815 POLR2J3Q9H1A7 115 aaKnown RBP12.07□□□□□ -0.48
COMMD4-211ENST00000564815 NANOGQ9H9S0 305 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms