RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 ARL2P36404 184 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 RPL35P42766 123 aaKnown RBP3.08□□□□□ -1.92
CHD9-212ENST00000564641 YAP1P46937 504 aaKnown RBP3.08□□□□□ -1.92
CHD9-212ENST00000564641 ACOT2P49753 483 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 GSK3BP49841 420 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 AKR1D1P51857 326 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 ARHGDIBP52566 201 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 AP1S2P56377 157 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 RAB25P57735 213 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 KCNK10P57789 538 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 GABARAPL2P60520 117 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 RAB14P61106 215 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 LSM3P62310 102 aaKnown RBP3.08□□□□□ -1.92
CHD9-212ENST00000564641 RPL10AP62906 217 aaKnown RBP3.08□□□□□ -1.92
CHD9-212ENST00000564641 ADARB1P78563 741 aaKnown RBP3.08□□□□□ -1.92
CHD9-212ENST00000564641 FLI1Q01543 452 aaPredicted RBP3.08□□□□□ -1.92
CHD9-212ENST00000564641 INCA1Q0VD86 236 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 AQP6Q13520 282 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 EIF4EBP2Q13542 120 aaPredicted RBP3.08□□□□□ -1.92
CHD9-212ENST00000564641 KCNJ11Q14654 390 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 SPHARQ15513 63 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 AANATQ16613 207 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 ZNF404Q494X3 552 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 Q5BKY6 102 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 TMEM236Q5W0B7 351 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 TTC23Q5W5X9 447 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 LEMD1Q68G75 181 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 SLC27A4Q6P1M0 643 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 TIFABQ6ZNK6 161 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 ZCCHC23Q6ZST2 131 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 PRSS48Q7RTY5 328 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 EFL1Q7Z2Z2 1120 aaKnown RBP3.08□□□□□ -1.92
CHD9-212ENST00000564641 VASH2Q86V25 355 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 C17orf64Q86WR6 236 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 DHFR2Q86XF0 187 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 MFSD6LQ8IWD5 586 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 KATNAL2Q8IYT4 538 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 TBC1D21Q8IYX1 336 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 OFCC1Q8IZS5 231 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 TEX26Q8N6G2 289 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 FAM83FQ8NEG4 500 aaPredicted RBP3.08□□□□□ -1.92
CHD9-212ENST00000564641 DENND6BQ8NEG7 585 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 ZNF555Q8NEP9 628 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 TRPV3Q8NET8 790 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 OR2T34Q8NGX1 318 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 OR2T3Q8NH03 318 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 SPATA18Q8TC71 538 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 BLOC1S5Q8TDH9 187 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 UBTD2Q8WUN7 234 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 RORBQ92753 470 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 UFD1Q92890 307 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 SLC35C1Q96A29 364 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 ZNF707Q96C28 371 aaPredicted RBP3.08□□□□□ -1.92
CHD9-212ENST00000564641 BIRC7Q96CA5 298 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 ASB9Q96DX5 294 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 ZHX1-C8orf76Q96EF9 292 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 CENPNQ96H22 339 aaPredicted RBP3.08□□□□□ -1.92
CHD9-212ENST00000564641 CPB2Q96IY4 423 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 RNF170Q96K19 258 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 CNDP1Q96KN2 507 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 HSFY1Q96LI6 401 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 NEDD4LQ96PU5 975 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 QKIQ96PU8 341 aaKnown RBP eCLIP3.08□□□□□ -1.92
CHD9-212ENST00000564641 CPXM1Q96SM3 734 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 PCDHB18PQ96TA0 734 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 NPAS2Q99743 824 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 GPA33Q99795 319 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 HSD17B14Q9BPX1 270 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 PELOQ9BRX2 385 aaKnown RBP3.08□□□□□ -1.92
CHD9-212ENST00000564641 FRMD8P1Q9BZ68 369 aaPredicted RBP3.08□□□□□ -1.92
CHD9-212ENST00000564641 UCK2Q9BZX2 261 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 C20orf27Q9GZN8 174 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 CCDC90BQ9GZT6 254 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 SIRPDQ9H106 197 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 DPEP2Q9H4A9 486 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 NXF3Q9H4D5 531 aaKnown RBP3.08□□□□□ -1.92
CHD9-212ENST00000564641 TRIM45Q9H8W5 580 aaPredicted RBP3.08□□□□□ -1.92
CHD9-212ENST00000564641 COG4Q9H9E3 785 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 MARCH5Q9NX47 278 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 SMPD3Q9NY59 655 aaPredicted RBP3.08□□□□□ -1.92
CHD9-212ENST00000564641 TAS2R9Q9NYW1 312 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 EXTL2Q9UBQ6 330 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 CYB5R1Q9UHQ9 305 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 PSORS1C1Q9UIG5 152 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 ANAPC7Q9UJX3 599 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 SPATA2Q9UM82 520 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 UBQLN1Q9UMX0 589 aaKnown RBP3.08□□□□□ -1.92
CHD9-212ENST00000564641 PRELID3BQ9Y3B1 194 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 PEX16Q9Y5Y5 336 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 MYH11P35749 1972 aa3.08□□□□□ -1.92
CHD9-212ENST00000564641 ZNF638Q14966 1978 aaKnown RBP3.07□□□□□ -1.92
CHD9-212ENST00000564641 BCLAF3A2AJT9 711 aaKnown RBP3.07□□□□□ -1.92
CHD9-212ENST00000564641 ZNF732B4DXR9 585 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 E5RI56 91 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 E7ESA3 106 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 F8W036 122 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 EEF2KO00418 725 aaKnown RBP3.07□□□□□ -1.92
CHD9-212ENST00000564641 BTN3A3O00478 584 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 SLC37A4O43826 429 aa3.07□□□□□ -1.92
CHD9-212ENST00000564641 TSC22D2O75157 780 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms