RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 MAT1AQ00266 395 aaKnown RBP11.52□□□□□ -0.56
COMMD4-209ENST00000564068 CCINQ13939 588 aa11.52□□□□□ -0.56
COMMD4-209ENST00000564068 SHHQ15465 462 aa11.52□□□□□ -0.56
COMMD4-209ENST00000564068 IAH1Q2TAA2 248 aaPredicted RBP11.52□□□□□ -0.56
COMMD4-209ENST00000564068 C12orf40Q86WS4 652 aa11.52□□□□□ -0.56
COMMD4-209ENST00000564068 SULF2Q8IWU5 870 aa11.52□□□□□ -0.56
COMMD4-209ENST00000564068 DND1Q8IYX4 353 aaKnown RBP11.52□□□□□ -0.56
COMMD4-209ENST00000564068 SNIP1Q8TAD8 396 aaKnown RBP11.52□□□□□ -0.56
COMMD4-209ENST00000564068 TMEM234Q8WY98 164 aa11.52□□□□□ -0.56
COMMD4-209ENST00000564068 APOBEC3BQ9UH17 382 aaKnown RBP11.52□□□□□ -0.56
COMMD4-209ENST00000564068 UBE2J1Q9Y385 318 aaPredicted RBP11.52□□□□□ -0.56
COMMD4-209ENST00000564068 PIKFYVEQ9Y2I7 2098 aa11.52□□□□□ -0.56
COMMD4-209ENST00000564068 SERINC4A6NH21 518 aa11.52□□□□□ -0.56
COMMD4-209ENST00000564068 C17orf105B2RV13 164 aa11.52□□□□□ -0.56
COMMD4-209ENST00000564068 SIGLEC6O43699 453 aa11.52□□□□□ -0.56
COMMD4-209ENST00000564068 CEBPBP17676 345 aa11.52□□□□□ -0.56
COMMD4-209ENST00000564068 CXCL2P19875 107 aa11.52□□□□□ -0.56
COMMD4-209ENST00000564068 GALP22466 123 aa11.52□□□□□ -0.56
COMMD4-209ENST00000564068 CRABP1P29762 137 aa11.52□□□□□ -0.56
COMMD4-209ENST00000564068 RAB5CP51148 216 aa11.52□□□□□ -0.56
COMMD4-209ENST00000564068 EEF1A2Q05639 463 aaKnown RBP11.52□□□□□ -0.56
COMMD4-209ENST00000564068 PPA1Q15181 289 aa11.52□□□□□ -0.56
COMMD4-209ENST00000564068 ZNF626Q68DY1 528 aa11.52□□□□□ -0.56
COMMD4-209ENST00000564068 TMEM184AQ6ZMB5 413 aa11.52□□□□□ -0.56
COMMD4-209ENST00000564068 ZNF765Q7L2R6 523 aa11.52□□□□□ -0.56
COMMD4-209ENST00000564068 HSD17B13Q7Z5P4 300 aaPredicted RBP11.52□□□□□ -0.56
COMMD4-209ENST00000564068 FAM213BQ8TBF2 198 aa11.52□□□□□ -0.56
COMMD4-209ENST00000564068 PTP4A1Q93096 173 aa11.52□□□□□ -0.56
COMMD4-209ENST00000564068 FGGYQ96C11 551 aa11.52□□□□□ -0.56
COMMD4-209ENST00000564068 VDAC3Q9Y277 283 aa11.52□□□□□ -0.56
COMMD4-209ENST00000564068 THBS1P07996 1170 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 RAB13P51153 203 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 KIAA0141Q14154 515 aaPredicted RBP11.52□□□□□ -0.57
COMMD4-209ENST00000564068 ELOCQ15369 112 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 LPCAT3Q6P1A2 487 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 MARCH3Q86UD3 253 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 SPICQ8N5J4 248 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 NPAS1Q99742 590 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 FBRSQ9HAH7 460 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 MBNL1Q9NR56 388 aaKnown RBP11.52□□□□□ -0.57
COMMD4-209ENST00000564068 DUSP22Q9NRW4 184 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 OPN4Q9UHM6 478 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 NCOR1O75376 2440 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 HIDE1A8MVS5 230 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 THEGLP0DJG4 465 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 C5AR1P21730 350 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 IDH3GP51553 393 aaPredicted RBP11.52□□□□□ -0.57
COMMD4-209ENST00000564068 TLE3Q04726 772 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 PMPCAQ10713 525 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 MELKQ14680 651 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 KIR2DS3Q14952 304 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 MANEAQ5SRI9 462 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 NAXDQ8IW45 347 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 ARHGDIGQ99819 225 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 SSX3Q99909 188 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 SLCO5A1Q9H2Y9 848 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 TAF9BQ9HBM6 251 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 ADGRL4Q9HBW9 690 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 FAM212BQ9NTI7 297 aaPredicted RBP11.52□□□□□ -0.57
COMMD4-209ENST00000564068 PLEKHJ1Q9NW61 149 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 TAS2R4Q9NYW5 299 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 DAPP1Q9UN19 280 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 C19orf53Q9UNZ5 99 aaPredicted RBP11.52□□□□□ -0.57
COMMD4-209ENST00000564068 FOXJ3Q9UPW0 622 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 FAM96BQ9Y3D0 163 aa11.52□□□□□ -0.57
COMMD4-209ENST00000564068 TMEM200CA6NKL6 621 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 H7C1Q1 480 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 XRCC3O43542 346 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 FGF17O60258 216 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 SLC36A2Q495M3 483 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 Q6ZNB5 142 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 RASGRP3Q8IV61 690 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 TMEM151BQ8IW70 566 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 OR5M9Q8NGP3 310 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 SPACA5Q96QH8 159 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 UBQLN4Q9NRR5 601 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 SLC22A11Q9NSA0 550 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 GFOD1Q9NXC2 390 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 NEUROG3Q9Y4Z2 214 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 WIF1Q9Y5W5 379 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 RNF215Q9Y6U7 377 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 TRIP12Q14669 1992 aaPredicted RBP11.51□□□□□ -0.57
COMMD4-209ENST00000564068 SHISA3A0PJX4 238 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 F5H5K5 113 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 TSTD3H0UI37 97 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 NSA2O95478 260 aaKnown RBP11.51□□□□□ -0.57
COMMD4-209ENST00000564068 HOXB3P14651 431 aaPredicted RBP11.51□□□□□ -0.57
COMMD4-209ENST00000564068 BLKP51451 505 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 NSDHLQ15738 373 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 NXPE3Q969Y0 559 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 RAB3CQ96E17 227 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 TGM7Q96PF1 710 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 C19orf43Q9BQ61 176 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 IL21Q9HBE4 155 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 PCDHGA9Q9Y5G4 932 aaKnown RBP11.51□□□□□ -0.57
COMMD4-209ENST00000564068 BCL2L11O43521 198 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 IFNA2P01563 188 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 NQO2P16083 231 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 GABRR1P24046 479 aa11.51□□□□□ -0.57
COMMD4-209ENST00000564068 MEOX2P50222 304 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms