RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 TXNDC12O95881 172 aa12.75□□□□□ -0.37
RPUSD1-204ENST00000563560 CAPZA2P47755 286 aa12.75□□□□□ -0.37
RPUSD1-204ENST00000563560 GSSP48637 474 aa12.75□□□□□ -0.37
RPUSD1-204ENST00000563560 TOP3AQ13472 1001 aaPredicted RBP12.75□□□□□ -0.37
RPUSD1-204ENST00000563560 THEM4Q5T1C6 240 aa12.75□□□□□ -0.37
RPUSD1-204ENST00000563560 FAM27BQ5VT28 67 aa12.75□□□□□ -0.37
RPUSD1-204ENST00000563560 ZNF770Q6IQ21 691 aaPredicted RBP12.75□□□□□ -0.37
RPUSD1-204ENST00000563560 CCDC121Q6ZUS5 278 aa12.75□□□□□ -0.37
RPUSD1-204ENST00000563560 TRPM8Q7Z2W7 1104 aa12.75□□□□□ -0.37
RPUSD1-204ENST00000563560 CPEB3Q8NE35 698 aaKnown RBP12.75□□□□□ -0.37
RPUSD1-204ENST00000563560 OR4C15Q8NGM1 316 aa12.75□□□□□ -0.37
RPUSD1-204ENST00000563560 OR52J3Q8NH60 311 aa12.75□□□□□ -0.37
RPUSD1-204ENST00000563560 NANOS1Q8WY41 292 aaKnown RBP12.75□□□□□ -0.37
RPUSD1-204ENST00000563560 BARX1Q9HBU1 254 aaPredicted RBP12.75□□□□□ -0.37
RPUSD1-204ENST00000563560 LYVE1Q9Y5Y7 322 aa12.75□□□□□ -0.37
RPUSD1-204ENST00000563560 HIVEP2P31629 2446 aa12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 VWC2LB2RUY7 222 aa12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 H7C1C5 153 aa12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 LY6HO94772 140 aa12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 ITGA2P17301 1181 aa12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 GLRXP35754 106 aa12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 PPOXP50336 477 aa12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 EFNA4P52798 201 aa12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 LCN6P62502 163 aa12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 SNTB2Q13425 540 aaKnown RBP12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 ENDOGQ14249 297 aaKnown RBP12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 TRIM25Q14258 630 aaKnown RBP12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 TMEM255AQ5JRV8 349 aa12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 FGD3Q5JSP0 725 aa12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 KRT80Q6KB66 452 aa12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 C1orf94Q6P1W5 598 aa12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 PGM2L1Q6PCE3 622 aa12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 CYP2R1Q6VVX0 501 aa12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 DPPA2Q7Z7J5 298 aa12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 CDK20Q8IZL9 346 aa12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 ZNF525Q8N782 197 aa12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 FNDC8Q8TC99 324 aa12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 SLC7A6OSQ96CW6 309 aaPredicted RBP12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 POM121Q96HA1 1249 aa12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 RSRC1Q96IZ7 334 aaKnown RBP12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 REG4Q9BYZ8 158 aa12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 VNN3Q9NY84 501 aa12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 VSX1Q9NZR4 365 aaPredicted RBP12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 FBXL3Q9UKT7 428 aa12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 FAM32AQ9Y421 112 aaKnown RBP12.74□□□□□ -0.37
RPUSD1-204ENST00000563560 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.73□□□□□ -0.371e-6■■■■□ 23.5
RPUSD1-204ENST00000563560 DNHD1Q96M86 4753 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 PRSS37A4D1T9 235 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 A6NIZ1 184 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 RNF223E7ERA6 249 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 AHCYL1O43865 530 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 SSX4O60224 188 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 ICMTO60725 284 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 NDUFB2O95178 105 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 GADD45GO95257 159 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 RAB36O95755 333 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 F12P00748 615 aaPredicted RBP12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 FABP3P05413 133 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 CTLA4P16410 223 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 NPR2P20594 1047 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 FPR3P25089 353 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 SDHAP31040 664 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 RRM2P31350 389 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 EVX1P49640 407 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 ZNF84P51523 738 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 RAP1BP61224 184 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 RAP1AP62834 184 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 CHRNB3Q05901 458 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 DAG1Q14118 895 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 MTX3Q5HYI7 312 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 PTCHD4Q6ZW05 846 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 SLC16A14Q7RTX9 510 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 ZDHHC21Q8IVQ6 265 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 C10orf105Q8TEF2 133 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 NSMAFQ92636 917 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 MRPL24Q96A35 216 aaKnown RBP12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 RASD2Q96D21 266 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 CLPTM1LQ96KA5 538 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 BTBD10Q9BSF8 475 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 MRPL37Q9BZE1 423 aaKnown RBP12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 WNT5BQ9H1J7 359 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 MUC13Q9H3R2 512 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 MYEF2Q9P2K5 600 aaKnown RBP12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 PRPF19Q9UMS4 504 aaKnown RBP12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 MALRD1Q5VYJ5 2156 aa12.73□□□□□ -0.37
RPUSD1-204ENST00000563560 LOC100509620A0A075B734 347 aa12.72□□□□□ -0.37
RPUSD1-204ENST00000563560 TEX13CA0A0J9YWL9 993 aa12.72□□□□□ -0.37
RPUSD1-204ENST00000563560 SMAD7O15105 426 aaKnown RBP12.72□□□□□ -0.37
RPUSD1-204ENST00000563560 FARS2O95363 451 aaKnown RBP12.72□□□□□ -0.37
RPUSD1-204ENST00000563560 CST2P09228 141 aa12.72□□□□□ -0.37
RPUSD1-204ENST00000563560 CCL2P13500 99 aa12.72□□□□□ -0.37
RPUSD1-204ENST00000563560 APEHP13798 732 aaKnown RBP12.72□□□□□ -0.37
RPUSD1-204ENST00000563560 ZNF32P17041 273 aa12.72□□□□□ -0.37
RPUSD1-204ENST00000563560 CDKN2AP42771 156 aaKnown RBP12.72□□□□□ -0.37
RPUSD1-204ENST00000563560 PSG4Q00888 419 aa12.72□□□□□ -0.37
RPUSD1-204ENST00000563560 SPIBQ01892 262 aa12.72□□□□□ -0.37
RPUSD1-204ENST00000563560 CD47Q08722 323 aa12.72□□□□□ -0.37
RPUSD1-204ENST00000563560 SLC36A2Q495M3 483 aa12.72□□□□□ -0.37
RPUSD1-204ENST00000563560 PGBD2Q6P3X8 592 aa12.72□□□□□ -0.37
RPUSD1-204ENST00000563560 VHLLQ6RSH7 139 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms