RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 CLRN1P58418 232 aa16.05■□□□□ 0.16
COMMD4-208ENST00000563220 THEM4Q5T1C6 240 aa16.05■□□□□ 0.16
COMMD4-208ENST00000563220 DMKNQ6E0U4 476 aaPredicted RBP16.05■□□□□ 0.16
COMMD4-208ENST00000563220 C22orf42Q6IC83 251 aa16.05■□□□□ 0.16
COMMD4-208ENST00000563220 ARL9Q6T311 187 aa16.05■□□□□ 0.16
COMMD4-208ENST00000563220 PLEKHG7Q6ZR37 379 aa16.05■□□□□ 0.16
COMMD4-208ENST00000563220 ZIC4Q8N9L1 334 aa16.05■□□□□ 0.16
COMMD4-208ENST00000563220 NOXO1Q8NFA2 376 aa16.05■□□□□ 0.16
COMMD4-208ENST00000563220 OTOSQ8NHW6 89 aa16.05■□□□□ 0.16
COMMD4-208ENST00000563220 THEM6Q8WUY1 208 aa16.05■□□□□ 0.16
COMMD4-208ENST00000563220 ROBO4Q8WZ75 1007 aa16.05■□□□□ 0.16
COMMD4-208ENST00000563220 RNF166Q96A37 237 aaPredicted RBP16.05■□□□□ 0.16
COMMD4-208ENST00000563220 ZNF845Q96IR2 970 aaPredicted RBP16.05■□□□□ 0.16
COMMD4-208ENST00000563220 AMELYQ99218 206 aa16.05■□□□□ 0.16
COMMD4-208ENST00000563220 MNTQ99583 582 aa16.05■□□□□ 0.16
COMMD4-208ENST00000563220 SLIRPQ9GZT3 109 aaKnown RBP16.05■□□□□ 0.16
COMMD4-208ENST00000563220 MRM2Q9UI43 246 aaKnown RBP16.05■□□□□ 0.16
COMMD4-208ENST00000563220 TRDV1A0A1B0GX56 115 aa16.05■□□□□ 0.16
COMMD4-208ENST00000563220 J3QRK9 145 aa16.05■□□□□ 0.16
COMMD4-208ENST00000563220 GAAP10253 952 aa16.05■□□□□ 0.16
COMMD4-208ENST00000563220 PSMB10P40306 273 aa16.05■□□□□ 0.16
COMMD4-208ENST00000563220 GBX2P52951 348 aaPredicted RBP16.05■□□□□ 0.16
COMMD4-208ENST00000563220 TAS2R43P59537 309 aa16.05■□□□□ 0.16
COMMD4-208ENST00000563220 SIRPAP78324 504 aa16.05■□□□□ 0.16
COMMD4-208ENST00000563220 HIST3H3Q16695 136 aa16.05■□□□□ 0.16
COMMD4-208ENST00000563220 SLC22A16Q86VW1 577 aa16.05■□□□□ 0.16
COMMD4-208ENST00000563220 SLC26A10Q8NG04 563 aa16.05■□□□□ 0.16
COMMD4-208ENST00000563220 MRPL48Q96GC5 212 aaKnown RBP16.05■□□□□ 0.16
COMMD4-208ENST00000563220 CENPBD1B2RD01 187 aa16.04■□□□□ 0.16
COMMD4-208ENST00000563220 NPIPA2E9PIF3 369 aa16.04■□□□□ 0.16
COMMD4-208ENST00000563220 NPIPA3F8WFD2 350 aa16.04■□□□□ 0.16
COMMD4-208ENST00000563220 OGG1O15527 345 aa16.04■□□□□ 0.16
COMMD4-208ENST00000563220 OR8G3PP0DMU2 310 aa16.04■□□□□ 0.16
COMMD4-208ENST00000563220 CLDN18P56856 261 aa16.04■□□□□ 0.16
COMMD4-208ENST00000563220 ADAM8P78325 824 aa16.04■□□□□ 0.16
COMMD4-208ENST00000563220 SLC3A1Q07837 685 aa16.04■□□□□ 0.16
COMMD4-208ENST00000563220 SLC10A1Q14973 349 aa16.04■□□□□ 0.16
COMMD4-208ENST00000563220 RGS21Q2M5E4 152 aa16.04■□□□□ 0.16
COMMD4-208ENST00000563220 LRFN4Q6PJG9 635 aa16.04■□□□□ 0.16
COMMD4-208ENST00000563220 SLC25A47Q6Q0C1 308 aa16.04■□□□□ 0.16
COMMD4-208ENST00000563220 LRRC69Q6ZNQ3 347 aa16.04■□□□□ 0.16
COMMD4-208ENST00000563220 TMEM91Q6ZNR0 172 aa16.04■□□□□ 0.16
COMMD4-208ENST00000563220 HDDC2Q7Z4H3 204 aa16.04■□□□□ 0.16
COMMD4-208ENST00000563220 CENPSQ8N2Z9 138 aa16.04■□□□□ 0.16
COMMD4-208ENST00000563220 ZNF775Q96BV0 537 aaPredicted RBP16.04■□□□□ 0.16
COMMD4-208ENST00000563220 PGLYRP3Q96LB9 341 aa16.04■□□□□ 0.16
COMMD4-208ENST00000563220 SF3B5Q9BWJ5 86 aaKnown RBP16.04■□□□□ 0.16
COMMD4-208ENST00000563220 ACKR4Q9NPB9 350 aa16.04■□□□□ 0.16
COMMD4-208ENST00000563220 RHBDL2Q9NX52 303 aa16.04■□□□□ 0.16
COMMD4-208ENST00000563220 QPCTLQ9NXS2 382 aa16.04■□□□□ 0.16
COMMD4-208ENST00000563220 TMEM14AQ9Y6G1 99 aa16.04■□□□□ 0.16
COMMD4-208ENST00000563220 ABHD16AO95870 558 aa16.03■□□□□ 0.16
COMMD4-208ENST00000563220 HLA-DPB1P04440 258 aa16.03■□□□□ 0.16
COMMD4-208ENST00000563220 SPARCP09486 303 aa16.03■□□□□ 0.16
COMMD4-208ENST00000563220 SDHBP21912 280 aa16.03■□□□□ 0.16
COMMD4-208ENST00000563220 FGF9P31371 208 aaPredicted RBP16.03■□□□□ 0.16
COMMD4-208ENST00000563220 RPS19P39019 145 aaKnown RBP16.03■□□□□ 0.16
COMMD4-208ENST00000563220 SRYQ05066 204 aa16.03■□□□□ 0.16
COMMD4-208ENST00000563220 FAM109AQ8N4B1 249 aa16.03■□□□□ 0.16
COMMD4-208ENST00000563220 MCHR2Q969V1 340 aa16.03■□□□□ 0.16
COMMD4-208ENST00000563220 SMAD5Q99717 465 aaKnown RBP16.03■□□□□ 0.16
COMMD4-208ENST00000563220 DEFB127Q9H1M4 99 aa16.03■□□□□ 0.16
COMMD4-208ENST00000563220 KLHL9Q9P2J3 617 aa16.03■□□□□ 0.16
COMMD4-208ENST00000563220 LIPGQ9Y5X9 500 aa16.03■□□□□ 0.16
COMMD4-208ENST00000563220 CFAP47Q6ZTR5 3102 aa16.03■□□□□ 0.16
COMMD4-208ENST00000563220 METTL15A6NJ78 407 aa16.03■□□□□ 0.16
COMMD4-208ENST00000563220 CD8B2A6NJW9 211 aa16.03■□□□□ 0.16
COMMD4-208ENST00000563220 ZNF716A6NP11 495 aa16.03■□□□□ 0.16
COMMD4-208ENST00000563220 GABRPO00591 440 aa16.03■□□□□ 0.16
COMMD4-208ENST00000563220 DVL2O14641 736 aa16.03■□□□□ 0.16
COMMD4-208ENST00000563220 UPK3AO75631 287 aa16.03■□□□□ 0.16
COMMD4-208ENST00000563220 OCM2P0CE71 109 aa16.03■□□□□ 0.16
COMMD4-208ENST00000563220 OCMP0CE72 109 aaPredicted RBP16.03■□□□□ 0.16
COMMD4-208ENST00000563220 CD8BP10966 210 aa16.03■□□□□ 0.16
COMMD4-208ENST00000563220 ZNF708P17019 499 aa16.03■□□□□ 0.16
COMMD4-208ENST00000563220 PMP22Q01453 160 aa16.03■□□□□ 0.16
COMMD4-208ENST00000563220 CDK5R1Q15078 307 aa16.03■□□□□ 0.16
COMMD4-208ENST00000563220 KCTD20Q7Z5Y7 419 aa16.03■□□□□ 0.16
COMMD4-208ENST00000563220 GLB1L2Q8IW92 636 aa16.03■□□□□ 0.16
COMMD4-208ENST00000563220 OR6Q1Q8NGQ2 317 aa16.03■□□□□ 0.16
COMMD4-208ENST00000563220 DACH2Q96NX9 599 aa16.03■□□□□ 0.16
COMMD4-208ENST00000563220 OR2M2Q96R28 347 aa16.03■□□□□ 0.16
COMMD4-208ENST00000563220 SLCO1C1Q9NYB5 712 aa16.03■□□□□ 0.16
COMMD4-208ENST00000563220 ZNF432O94892 652 aa16.02■□□□□ 0.16
COMMD4-208ENST00000563220 QDPRP09417 244 aa16.02■□□□□ 0.16
COMMD4-208ENST00000563220 CD53P19397 219 aa16.02■□□□□ 0.16
COMMD4-208ENST00000563220 NTF4P34130 210 aa16.02■□□□□ 0.16
COMMD4-208ENST00000563220 EGR3Q06889 387 aa16.02■□□□□ 0.16
COMMD4-208ENST00000563220 PHYHD1Q5SRE7 291 aa16.02■□□□□ 0.16
COMMD4-208ENST00000563220 PDSS1Q5T2R2 415 aa16.02■□□□□ 0.16
COMMD4-208ENST00000563220 LIPNQ5VXI9 398 aa16.02■□□□□ 0.16
COMMD4-208ENST00000563220 ABLIM2Q6H8Q1 611 aa16.02■□□□□ 0.16
COMMD4-208ENST00000563220 RPL22L1Q6P5R6 122 aaKnown RBP16.02■□□□□ 0.16
COMMD4-208ENST00000563220 C11orf40Q8WZ69 217 aa16.02■□□□□ 0.16
COMMD4-208ENST00000563220 GHSRQ92847 366 aa16.02■□□□□ 0.16
COMMD4-208ENST00000563220 CPNE4Q96A23 557 aaPredicted RBP16.02■□□□□ 0.16
COMMD4-208ENST00000563220 CDADC1Q9BWV3 514 aa16.02■□□□□ 0.16
COMMD4-208ENST00000563220 TIGARQ9NQ88 270 aa16.02■□□□□ 0.16
COMMD4-208ENST00000563220 IKZF2Q9UKS7 526 aa16.02■□□□□ 0.16
COMMD4-208ENST00000563220 PHYHO14832 338 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms