RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 WIPI2Q9Y4P8 454 aa10.08□□□□□ -0.8
CARMIL3-204ENST00000561354 TRBV5-3A0A0A0MS03 114 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 CLDN25C9JDP6 229 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 BCL10O95999 233 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 IGHV3-13P01766 116 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 IGHV2-5P01817 119 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 MT-ND5P03915 603 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 LCKP06239 509 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 PGA4P0DJD7 388 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 PGA3P0DJD8 388 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 COX4I1P13073 169 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 CCL2P13500 99 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 STX1BP61266 288 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 ERVS71-1P61550 626 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 ZNF74Q16587 644 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 HFEQ30201 348 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 AWAT1Q58HT5 328 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 DCAF12L2Q5VW00 463 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 C16orf89Q6UX73 402 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 FUNDC1Q8IVP5 155 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 ZDHHC22Q8N966 263 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 RBM15BQ8NDT2 890 aaKnown RBP10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 HIPK4Q8NE63 616 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 OR4K5Q8NGD3 323 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 RAB1CQ92928 201 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 SPDL1Q96EA4 605 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 TIMD4Q96H15 378 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 MCHR1Q99705 422 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 IKZF5Q9H5V7 419 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 RNF121Q9H920 327 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 DECR2Q9NUI1 292 aa10.07□□□□□ -0.8
CARMIL3-204ENST00000561354 IQCMA0A1B0GVH7 501 aa10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 EVPLLA8MZ36 301 aa10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 RNF13O43567 381 aa10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 FSHBP01225 129 aa10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 QDPRP09417 244 aa10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 AQP1P29972 269 aa10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 PLP2Q04941 152 aa10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 CYLC2Q14093 348 aaPredicted RBP10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 HIST3H3Q16695 136 aa10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 PAGE3Q5JUK9 113 aa10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 FAM209AQ5JX71 171 aa10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 PRR31Q5SQ13 230 aa10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 USP51Q70EK9 711 aa10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 SLC16A14Q7RTX9 510 aa10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 RETREG3Q86VR2 466 aa10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 BPIFB2Q8N4F0 458 aa10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 SEPHS2Q99611 448 aa10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 ARHGDIGQ99819 225 aa10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 SLC6A7Q99884 636 aa10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 SLC19A3Q9BZV2 496 aa10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 OR51B6Q9H340 312 aa10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 C7orf69Q9H7B7 122 aa10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 SAP30LQ9HAJ7 183 aa10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 NTN4Q9HB63 628 aa10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 ESM1Q9NQ30 184 aa10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 NANSQ9NR45 359 aa10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 ZNF229Q9UJW7 825 aa10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 PRPF19Q9UMS4 504 aaKnown RBP10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 TENM1Q9UKZ4 2725 aa10.06□□□□□ -0.8
CARMIL3-204ENST00000561354 PPIAL4EA0A075B759 164 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 PPIAL4CA0A0B4J2A2 164 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 CENPBD1B2RD01 187 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 PPIAL4DF5H284 164 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 M0R3H8 397 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 TPD52L2O43399 206 aaKnown RBP10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 KCNAB3O43448 404 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 LYPD3O95274 346 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 CH25HO95992 272 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 IGHG1P01857 330 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 MMP7P09237 267 aaPredicted RBP10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 ASAH2BP0C7U1 165 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 PPIAL4FP0DN26 164 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 ADRA2CP18825 462 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 FPR2P25090 351 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 ZNF84P51523 738 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 PCBP3P57721 371 aaKnown RBP10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 UBA52P62987 128 aaKnown RBP10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 MELKQ14680 651 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 TSTQ16762 297 aaKnown RBP10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 DUSP7Q16829 419 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 TUSC1Q2TAM9 212 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 ENTPD8Q5MY95 495 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 TTC33Q6PID6 262 aaPredicted RBP10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 LRRC17Q8N6Y2 441 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 SMYD1Q8NB12 490 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 OR6T1Q8NGN1 323 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 OR1J1Q8NGS3 322 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 ADAMTS16Q8TE57 1224 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 STMN2Q93045 179 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 MCHR2Q969V1 340 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 ELMOD3Q96FG2 381 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 MPP4Q96JB8 637 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 ZNF426Q9BUY5 554 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 ZNF747Q9BV97 191 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 MRPL13Q9BYD1 178 aaKnown RBP10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 DCLRE1BQ9H816 532 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 RNPEPL1Q9HAU8 725 aa10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 DDX28Q9NUL7 540 aaKnown RBP10.05□□□□□ -0.8
CARMIL3-204ENST00000561354 CCDC167Q9P0B6 97 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms