RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 EMC7Q9NPA0 242 aa8.79□□□□□ -1
HERC1-212ENST00000561348 CBLN4Q9NTU7 201 aa8.79□□□□□ -1
HERC1-212ENST00000561348 FZR1Q9UM11 496 aa8.79□□□□□ -1
HERC1-212ENST00000561348 POMPQ9Y244 141 aa8.79□□□□□ -1
HERC1-212ENST00000561348 POLR1DQ9Y2S0 133 aa8.79□□□□□ -1
HERC1-212ENST00000561348 LYVE1Q9Y5Y7 322 aa8.79□□□□□ -1
HERC1-212ENST00000561348 IGHV2OR16-5A0A0B4J2B6 119 aa8.78□□□□□ -1
HERC1-212ENST00000561348 FAM171A2A8MVW0 826 aa8.78□□□□□ -1
HERC1-212ENST00000561348 ACOT8O14734 319 aa8.78□□□□□ -1
HERC1-212ENST00000561348 SSX4O60224 188 aa8.78□□□□□ -1
HERC1-212ENST00000561348 PTP4A3O75365 173 aa8.78□□□□□ -1
HERC1-212ENST00000561348 SOX14O95416 240 aa8.78□□□□□ -1
HERC1-212ENST00000561348 GPANK1O95872 356 aa8.78□□□□□ -1
HERC1-212ENST00000561348 RENP00797 406 aa8.78□□□□□ -1
HERC1-212ENST00000561348 GASTP01350 101 aa8.78□□□□□ -1
HERC1-212ENST00000561348 IGKV3-15P01624 115 aa8.78□□□□□ -1
HERC1-212ENST00000561348 IGHMP01871 453 aa8.78□□□□□ -1
HERC1-212ENST00000561348 OR4A8P0C604 315 aa8.78□□□□□ -1
HERC1-212ENST00000561348 DANCRP0C864 163 aa8.78□□□□□ -1
HERC1-212ENST00000561348 FAM157BP0CG42 384 aa8.78□□□□□ -1
HERC1-212ENST00000561348 BMP4P12644 408 aa8.78□□□□□ -1
HERC1-212ENST00000561348 APEX1P27695 318 aaKnown RBP8.78□□□□□ -1
HERC1-212ENST00000561348 SDHAP31040 664 aa8.78□□□□□ -1
HERC1-212ENST00000561348 APOBEC3AP31941 199 aaPredicted RBP8.78□□□□□ -1
HERC1-212ENST00000561348 APLNRP35414 380 aa8.78□□□□□ -1
HERC1-212ENST00000561348 THBS4P35443 961 aa8.78□□□□□ -1
HERC1-212ENST00000561348 SERPINF1P36955 418 aa8.78□□□□□ -1
HERC1-212ENST00000561348 FHL1Q13642 323 aa8.78□□□□□ -1
HERC1-212ENST00000561348 RAB35Q15286 201 aa8.78□□□□□ -1
HERC1-212ENST00000561348 TESK1Q15569 626 aa8.78□□□□□ -1
HERC1-212ENST00000561348 RFX4Q33E94 735 aa8.78□□□□□ -1
HERC1-212ENST00000561348 MESTQ5EB52 335 aa8.78□□□□□ -1
HERC1-212ENST00000561348 C1orf146Q5VVC0 180 aa8.78□□□□□ -1
HERC1-212ENST00000561348 GPR139Q6DWJ6 353 aa8.78□□□□□ -1
HERC1-212ENST00000561348 PGBD2Q6P3X8 592 aa8.78□□□□□ -1
HERC1-212ENST00000561348 LEG1Q6P5S2 330 aa8.78□□□□□ -1
HERC1-212ENST00000561348 SLC25A47Q6Q0C1 308 aa8.78□□□□□ -1
HERC1-212ENST00000561348 DPY19L2P2Q6ZN68 376 aa8.78□□□□□ -1
HERC1-212ENST00000561348 CCDC121Q6ZUS5 278 aa8.78□□□□□ -1
HERC1-212ENST00000561348 SLC30A7Q8NEW0 376 aa8.78□□□□□ -1
HERC1-212ENST00000561348 OR4K13Q8NH42 304 aa8.78□□□□□ -1
HERC1-212ENST00000561348 ZNF519Q8TB69 540 aa8.78□□□□□ -1
HERC1-212ENST00000561348 OTULINQ96BN8 352 aa8.78□□□□□ -1
HERC1-212ENST00000561348 DHRS1Q96LJ7 313 aa8.78□□□□□ -1
HERC1-212ENST00000561348 TRAF4Q9BUZ4 470 aaPredicted RBP8.78□□□□□ -1
HERC1-212ENST00000561348 FN3KQ9H479 309 aa8.78□□□□□ -1
HERC1-212ENST00000561348 SIAEQ9HAT2 523 aa8.78□□□□□ -1
HERC1-212ENST00000561348 MOV10Q9HCE1 1003 aaKnown RBP8.78□□□□□ -1
HERC1-212ENST00000561348 CA10Q9NS85 328 aa8.78□□□□□ -1
HERC1-212ENST00000561348 TBC1D23Q9NUY8 699 aa8.78□□□□□ -1
HERC1-212ENST00000561348 VNN3Q9NY84 501 aa8.78□□□□□ -1
HERC1-212ENST00000561348 B3GNT2Q9NY97 397 aa8.78□□□□□ -1
HERC1-212ENST00000561348 SPEF1Q9Y4P9 236 aa8.78□□□□□ -1
HERC1-212ENST00000561348 PMF1-BGLAPU3KQ54 211 aa8.78□□□□□ -1
HERC1-212ENST00000561348 OTOGQ6ZRI0 2925 aa8.77□□□□□ -1
HERC1-212ENST00000561348 SLC22A23A1A5C7 686 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 PRSS37A4D1T9 235 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 TRIM64A6NGJ6 449 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 TRIM64BA6NI03 449 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 AQP12BA6NM10 295 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 CENPBD1B2RD01 187 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 C3orf80F5H4A9 247 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 H3BN98 237 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 CIB2O75838 187 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 ATP5HO75947 161 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 MPZL1O95297 269 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 IGLV1-44P01699 117 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 CD8AP01732 235 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 HLA-DQA2P01906 255 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 LCKP06239 509 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 IGFBP1P08833 259 aaPredicted RBP8.77□□□□□ -1.01
HERC1-212ENST00000561348 TSPAN19P0C672 248 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 ZNF32P17041 273 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 NPR2P20594 1047 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 PAX7P23759 505 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 FPR3P25089 353 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 POU1F1P28069 291 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 NUDT6P53370 316 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 SNRPD2P62316 118 aaKnown RBP8.77□□□□□ -1.01
HERC1-212ENST00000561348 HGFACQ04756 655 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 TSPAN31Q12999 210 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 HIST3H3Q16695 136 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 MICAQ29983 383 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 TBC1D28Q2M2D7 210 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 ALKBH6Q3KRA9 238 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 PABPC1L2AQ5JQF8 200 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 C10orf128Q5T292 105 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 SHEQ5VZ18 495 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 ZNF544Q6NX49 715 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 UGT2A3Q6UWM9 527 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 SPNS3Q6ZMD2 512 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 PTCHD4Q6ZW05 846 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 Q71RC1 249 aaPredicted RBP8.77□□□□□ -1.01
HERC1-212ENST00000561348 TGIF2LYQ8IUE0 185 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 AQP12AQ8IXF9 295 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 ADGRG5Q8IZF4 528 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 SVOPLQ8N434 492 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 SDR9C7Q8NEX9 313 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 IL17RDQ8NFM7 739 aa8.77□□□□□ -1.01
HERC1-212ENST00000561348 OR4F15Q8NGB8 312 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms