RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 NMD3Q96D46 503 aaKnown RBP6.36□□□□□ -1.39
ZEB1-223ENST00000561304 SGTBQ96EQ0 304 aa6.36□□□□□ -1.39
ZEB1-223ENST00000561304 PRRC1Q96M27 445 aa6.36□□□□□ -1.39
ZEB1-223ENST00000561304 FANCD2OSQ96PS1 177 aa6.36□□□□□ -1.39
ZEB1-223ENST00000561304 TSPAN32Q96QS1 320 aa6.36□□□□□ -1.39
ZEB1-223ENST00000561304 SH3GL1Q99961 368 aa6.36□□□□□ -1.39
ZEB1-223ENST00000561304 SYT3Q9BQG1 590 aa6.36□□□□□ -1.39
ZEB1-223ENST00000561304 PIMREGQ9BSJ6 248 aa6.36□□□□□ -1.39
ZEB1-223ENST00000561304 MRPL13Q9BYD1 178 aaKnown RBP6.36□□□□□ -1.39
ZEB1-223ENST00000561304 OR51B6Q9H340 312 aa6.36□□□□□ -1.39
ZEB1-223ENST00000561304 MOV10Q9HCE1 1003 aaKnown RBP6.36□□□□□ -1.39
ZEB1-223ENST00000561304 RHCGQ9UBD6 479 aa6.36□□□□□ -1.39
ZEB1-223ENST00000561304 BAG5Q9UL15 447 aa6.36□□□□□ -1.39
ZEB1-223ENST00000561304 UGT2A1Q9Y4X1 527 aa6.36□□□□□ -1.39
ZEB1-223ENST00000561304 ARHGAP32A7KAX9 2087 aa6.36□□□□□ -1.39
ZEB1-223ENST00000561304 DYSFO75923 2080 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 LOC390937A0A1W2PQ73 354 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 ELOVL7A1L3X0 281 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 NDUFS8O00217 210 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 NCR1O76036 304 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 PRSS23O95084 383 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 STAMBPO95630 424 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 RAB36O95755 333 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 BCL10O95999 233 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 IGHG1P01857 330 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 MMP7P09237 267 aaPredicted RBP6.35□□□□□ -1.39
ZEB1-223ENST00000561304 COX4I1P13073 169 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 DAOP14920 347 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 ACADSP16219 412 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 TCN1P20061 433 aaPredicted RBP6.35□□□□□ -1.39
ZEB1-223ENST00000561304 MAKP20794 623 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 CDAP32320 146 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 MDH1P40925 334 aaKnown RBP6.35□□□□□ -1.39
ZEB1-223ENST00000561304 ALDH3B1P43353 468 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 SLC7A2P52569 658 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 ZNF133P52736 654 aaPredicted RBP6.35□□□□□ -1.39
ZEB1-223ENST00000561304 SEC24CP53992 1094 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 CLRN1P58418 232 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 SELENOWP63302 87 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 LIPEQ05469 1076 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 TOP3AQ13472 1001 aaPredicted RBP6.35□□□□□ -1.39
ZEB1-223ENST00000561304 TRIP10Q15642 601 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 ALKBH6Q3KRA9 238 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 ELFN2Q5R3F8 820 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 CYB5R2Q6BCY4 276 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 CXXC5Q7LFL8 322 aaKnown RBP6.35□□□□□ -1.39
ZEB1-223ENST00000561304 PIWIL3Q7Z3Z3 882 aaKnown RBP6.35□□□□□ -1.39
ZEB1-223ENST00000561304 LRRC75AQ8NAA5 344 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 PCYOX1LQ8NBM8 494 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 IL17RDQ8NFM7 739 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 LIPHQ8WWY8 451 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 GTF3AQ92664 365 aaKnown RBP6.35□□□□□ -1.39
ZEB1-223ENST00000561304 NABP1Q96AH0 204 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 MSI2Q96DH6 328 aaKnown RBP6.35□□□□□ -1.39
ZEB1-223ENST00000561304 POLR2J2Q9GZM3 115 aaKnown RBP6.35□□□□□ -1.39
ZEB1-223ENST00000561304 RAB1BQ9H0U4 201 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 POLR2J3Q9H1A7 115 aaKnown RBP6.35□□□□□ -1.39
ZEB1-223ENST00000561304 CHODLQ9H9P2 273 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 DYNLRB1Q9NP97 96 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 INIPQ9NRY2 104 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 GID8Q9NWU2 228 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 CMAHPQ9Y471 501 aa6.35□□□□□ -1.39
ZEB1-223ENST00000561304 TRAV27A0A087WT01 109 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 A0A1W2PRG6 482 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 MCIDASD6RGH6 385 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 CXCR6O00574 342 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 WNT9BO14905 357 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 SLC22A2O15244 555 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 MGRN1O60291 552 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 CLPTM1O96005 669 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 IGF2P01344 180 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 IGHMP01871 453 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 HPXP02790 462 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 HIST1H2ABP04908 130 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 SERPINA5P05154 406 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 OR8G3PP0DMU2 310 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 NAT2P11245 290 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 IFI30P13284 250 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 APEHP13798 732 aaKnown RBP6.34□□□□□ -1.39
ZEB1-223ENST00000561304 NCK1P16333 377 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 ZNF23P17027 643 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 ZNF26P17031 533 aaPredicted RBP6.34□□□□□ -1.39
ZEB1-223ENST00000561304 GIFP27352 417 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 GLRXP35754 106 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 GPR4P46093 362 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 GSK3BP49841 420 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 SRSF2Q01130 221 aaKnown RBP6.34□□□□□ -1.39
ZEB1-223ENST00000561304 HNRNPA0Q13151 305 aaKnown RBP6.34□□□□□ -1.39
ZEB1-223ENST00000561304 RIN1Q13671 783 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 CHRFAM7AQ494W8 412 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 C10orf128Q5T292 105 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 SLC25A47Q6Q0C1 308 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 TBPL2Q6SJ96 375 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 CBLL1Q75N03 491 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 HIST3H2AQ7L7L0 130 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 SLC16A14Q7RTX9 510 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 NRMQ8IXM6 262 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 OFCC1Q8IZS5 231 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 LRRC18Q8N456 261 aa6.34□□□□□ -1.39
ZEB1-223ENST00000561304 FAM86B1Q8N7N1 296 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms