RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 LNX2Q8N448 690 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 LRRC75AQ8NAA5 344 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 GJC3Q8NFK1 279 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 ZNF519Q8TB69 540 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 TMEM171Q8WVE6 324 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 PIGTQ969N2 578 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 FBXW5Q969U6 566 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 TRMT61AQ96FX7 289 aaKnown RBP9.38□□□□□ -0.91
TPM1-229ENST00000561242 CIB1Q99828 191 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 PKP2Q99959 881 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 FUZQ9BT04 418 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 GRIP2Q9C0E4 1043 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 NUAK2Q9H093 628 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 CXorf56Q9H5V9 222 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 SP140LQ9H930 580 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 ELOVL3Q9HB03 270 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 PLEK2Q9NYT0 353 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 VSX1Q9NZR4 365 aaPredicted RBP9.38□□□□□ -0.91
TPM1-229ENST00000561242 KCNG2Q9UJ96 466 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 SLC25A15Q9Y619 301 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 PMF1-BGLAPU3KQ54 211 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 LOC400499M0QZD8 3231 aa9.38□□□□□ -0.91
TPM1-229ENST00000561242 MYO7BQ6PIF6 2116 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 ANKRD65E5RJM6 399 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 PDLIM1O00151 329 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 CTAG2O75638 210 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 IGFBP2P18065 325 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 GCH1P30793 250 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 CDAP32320 146 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 CDKN2AP42771 156 aaKnown RBP9.37□□□□□ -0.91
TPM1-229ENST00000561242 SLC15A1P46059 708 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 ALDH3A2P51648 485 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 LSM6P62312 80 aaKnown RBP9.37□□□□□ -0.91
TPM1-229ENST00000561242 TUBA1BP68363 451 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 TUBA4AP68366 448 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 TEKQ02763 1124 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 RUNX1T1Q06455 604 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 FMODQ06828 376 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 BSPH1Q075Z2 132 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 AQP6Q13520 282 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 DAG1Q14118 895 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 C3orf36Q3SXR2 165 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 MESTQ5EB52 335 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 NCMAPQ5T1S8 102 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 FAM27BQ5VT28 67 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 SLC25A47Q6Q0C1 308 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 VHLLQ6RSH7 139 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 THSD4Q6ZMP0 1018 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 C20orf204Q6ZNR8 217 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 PTCHD4Q6ZW05 846 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 TUBA1AQ71U36 451 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 SHFQ7M4L6 423 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 MDP1Q86V88 176 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 CDC20BQ86Y33 519 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 SKA3Q8IX90 412 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 C1orf174Q8IYL3 243 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 PARP8Q8N3A8 854 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 FAM169BQ8N8A8 192 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 OR5L1Q8NGL2 311 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 IPCEF1Q8WWN9 437 aaPredicted RBP9.37□□□□□ -0.91
TPM1-229ENST00000561242 AKAP1Q92667 903 aaKnown RBP eCLIP9.37□□□□□ -0.91
TPM1-229ENST00000561242 RFKQ969G6 155 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 SPTSSAQ969W0 71 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 MRPL48Q96GC5 212 aaKnown RBP9.37□□□□□ -0.91
TPM1-229ENST00000561242 Q96MT0 163 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 COG8Q96MW5 612 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 PITX2Q99697 317 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 GPA33Q99795 319 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 APOL4Q9BPW4 351 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 VNN3Q9NY84 501 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 CISD1Q9NZ45 108 aaKnown RBP9.37□□□□□ -0.91
TPM1-229ENST00000561242 B9D1Q9UPM9 204 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 DNAJC13O75165 2243 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 GTF3C1Q12789 2109 aa9.37□□□□□ -0.91
TPM1-229ENST00000561242 POLEQ07864 2286 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 SGCEO43556 437 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 MPZL2O60487 215 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 APOC1P02654 83 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 SERPINA5P05154 406 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 LCKP06239 509 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 EDNRAP25101 427 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 GSTT1P30711 240 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 DAPP51397 102 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 SLC25A1P53007 311 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 ECH1Q13011 328 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 RAB39AQ14964 217 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 PTGES3Q15185 160 aaKnown RBP9.36□□□□□ -0.91
TPM1-229ENST00000561242 HIST3H3Q16695 136 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 PHYHD1Q5SRE7 291 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 HIST2H2BCQ6DN03 193 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 ZNF770Q6IQ21 691 aaPredicted RBP9.36□□□□□ -0.91
TPM1-229ENST00000561242 ADAM5Q6NVV9 412 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 CXXC5Q7LFL8 322 aaKnown RBP9.36□□□□□ -0.91
TPM1-229ENST00000561242 FAM122BQ7Z309 247 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 GID4Q8IVV7 300 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 HS3ST5Q8IZT8 346 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 GALNT4Q8N4A0 578 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 CBR4Q8N4T8 237 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 CYB561A3Q8NBI2 242 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 SLC37A3Q8NCC5 494 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms