RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 KLHDC9Q8NEP7 349 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 LFNGQ8NES3 379 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 TTLQ8NG68 377 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 OR2AP1Q8NGE2 309 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 OR5AP2Q8NGF4 316 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 OR2L8Q8NGY9 312 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 OR8U1Q8NH10 309 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 OR51F2Q8NH61 342 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 OR51A7Q8NH64 312 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 ERMNQ8TAM6 284 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 ZNF564Q8TBZ8 553 aaPredicted RBP1.72□□□□□ -2.13
RTF1-207ENST00000561076 OR51E1Q8TCB6 317 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 FAM45AQ8TCE6 357 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 SFXN5Q8TD22 340 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 SDR42E1Q8WUS8 393 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 RNF133Q8WVZ7 376 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 APH1BQ8WW43 257 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 DDB2Q92466 427 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 CDS1Q92903 461 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 MED8Q96G25 268 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 PAGE5Q96GU1 130 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 CPB2Q96IY4 423 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 C20orf173Q96LM9 149 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 C9orf85Q96MD7 179 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 ZNF75AQ96N20 296 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 VAT1Q99536 393 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 TSNAXQ99598 290 aaKnown RBP1.72□□□□□ -2.13
RTF1-207ENST00000561076 RARRES2Q99969 163 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 HSD17B14Q9BPX1 270 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 OVOL2Q9BRP0 275 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 TMEM38AQ9H6F2 299 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 WDR54Q9H977 334 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 PLEKHA1Q9HB21 404 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 PLGRKTQ9HBL7 147 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 ACP6Q9NPH0 428 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 ASCL3Q9NQ33 180 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 MEPEQ9NQ76 525 aaPredicted RBP1.72□□□□□ -2.13
RTF1-207ENST00000561076 IFT46Q9NQC8 304 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 TREX1Q9NSU2 369 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 ZFP57Q9NU63 452 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 IMP3Q9NV31 184 aaKnown RBP1.72□□□□□ -2.13
RTF1-207ENST00000561076 RHBDL2Q9NX52 303 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 B3GNT2Q9NY97 397 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 TREM2Q9NZC2 230 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 WRAP73Q9P2S5 460 aaPredicted RBP1.72□□□□□ -2.13
RTF1-207ENST00000561076 TRMT112Q9UI30 125 aaKnown RBP1.72□□□□□ -2.13
RTF1-207ENST00000561076 BTNL2Q9UIR0 455 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 GNPTGQ9UJJ9 305 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 SCML1Q9UN30 329 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 MRPS18CQ9Y3D5 142 aaKnown RBP1.72□□□□□ -2.13
RTF1-207ENST00000561076 SAMHD1Q9Y3Z3 626 aaKnown RBP1.72□□□□□ -2.13
RTF1-207ENST00000561076 RIMBP3CA6NJZ7 1639 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 RIMBP3BA6NNM3 1639 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 RIMBP3Q9UFD9 1639 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 SMARCA2P51531 1590 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 JCADQ9P266 1359 aa1.72□□□□□ -2.13
RTF1-207ENST00000561076 ARHGEF11O15085 1522 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 NCANO14594 1321 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 ABCB11O95342 1321 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 CDHR2Q9BYE9 1310 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 A0A0B4J2A0 478 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 TRGV8A0A0C4DH27 118 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 ZNF816-ZNF321PA0A0X1KG74 233 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 A0A1B0GVI7 797 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 ANKRD20A5PA0PJZ0 165 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 MEIOCA2RUB1 952 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 DHRS7CA6NNS2 312 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 E9PQ18 207 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 NPIPB8E9PQR5 432 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 F6UB75 175 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 G3V3Y1 287 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 H3BNH8 94 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 CLDN34H7C241 214 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 PLPP3O14495 311 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 UBDO15205 165 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 PFDN6O15212 129 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 FABP7O15540 132 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 CRXO43186 299 aaPredicted RBP1.71□□□□□ -2.14
RTF1-207ENST00000561076 RAD51CO43502 376 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 FGF17O60258 216 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 HPGDSO60760 199 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 RDH16O75452 317 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 KHDRBS3O75525 346 aaKnown RBP1.71□□□□□ -2.14
RTF1-207ENST00000561076 ZNF189O75820 626 aaPredicted RBP1.71□□□□□ -2.14
RTF1-207ENST00000561076 EIF3GO75821 320 aaKnown RBP eCLIP1.71□□□□□ -2.14
RTF1-207ENST00000561076 CEACAM4O75871 244 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 RBBP9O75884 186 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 LYPD3O95274 346 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 NSA2O95478 260 aaKnown RBP1.71□□□□□ -2.14
RTF1-207ENST00000561076 TBX6O95947 436 aaPredicted RBP1.71□□□□□ -2.14
RTF1-207ENST00000561076 NUDT3O95989 172 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 RENP00797 406 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 ASS1P00966 412 aaKnown RBP1.71□□□□□ -2.14
RTF1-207ENST00000561076 TNNC2P02585 160 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 ORM1P02763 201 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 CALB1P05937 261 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 SERPINA6P08185 405 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 HOXD4P09016 255 aaPredicted RBP1.71□□□□□ -2.14
RTF1-207ENST00000561076 SLC35E2BP0CK96 405 aa1.71□□□□□ -2.14
RTF1-207ENST00000561076 RBMY1CP0DJD4 496 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms