RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 IFNW1P05000 195 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 BCKDHAP12694 445 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 MMP9P14780 707 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 ZNF250P15622 560 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 ARSBP15848 533 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 UQCRC2P22695 453 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 TYK2P29597 1187 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 VEGFCP49767 419 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 P2RX1P51575 399 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 MAPK12P53778 367 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 PSMD4P55036 377 aaKnown RBP3.02□□□□□ -1.93
HERC1-211ENST00000560983 FOXA1P55317 472 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 TAS2R39P59534 338 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 CSNK2A1P68400 391 aaPredicted RBP3.02□□□□□ -1.93
HERC1-211ENST00000560983 COX10Q12887 443 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 NPRL3Q12980 569 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 ZMYND11Q15326 602 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 OR4D1Q15615 310 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 TMEM155Q4W5P6 130 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 CDKL4Q5MAI5 379 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 GFI1BQ5VTD9 330 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 TMEM154Q6P9G4 183 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 ADAMTSL2Q86TH1 951 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 SATL1Q86VE3 508 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 TCAIMQ8N3R3 496 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 SPICQ8N5J4 248 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 PIGXQ8TBF5 258 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 C10orf82Q8WW14 230 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 ELMOD3Q96FG2 381 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 BBS4Q96RK4 519 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 ABHD14AQ9BUJ0 271 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 MRPL1Q9BYD6 325 aaKnown RBP3.02□□□□□ -1.93
HERC1-211ENST00000560983 PPA2Q9H2U2 334 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 CNOT10Q9H9A5 744 aaKnown RBP3.02□□□□□ -1.93
HERC1-211ENST00000560983 HHATLQ9HCP6 504 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 Q9N2J8 555 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 UBQLN4Q9NRR5 601 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 CTNNAL1Q9UBT7 734 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 MRTO4Q9UKD2 239 aaKnown RBP3.02□□□□□ -1.93
HERC1-211ENST00000560983 SLC9A8Q9Y2E8 581 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 CARD8Q9Y2G2 431 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 DTNAQ9Y4J8 743 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 DNAH5Q8TE73 4624 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 DNAH6Q9C0G6 4158 aa3.02□□□□□ -1.93
HERC1-211ENST00000560983 HEATR1Q9H583 2144 aaKnown RBP3.01□□□□□ -1.93
HERC1-211ENST00000560983 IGHV1-69DA0A0B4J2H0 117 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 A0A1B0GW55 424 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 ANKRD61A6NGH8 418 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 CEACAM18A8MTB9 384 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 K7EPI3 171 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 TM9SF1O15321 606 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 DNPH1O43598 174 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 ZNF500O60304 480 aaPredicted RBP3.01□□□□□ -1.93
HERC1-211ENST00000560983 SKAP2O75563 359 aaPredicted RBP3.01□□□□□ -1.93
HERC1-211ENST00000560983 KCNK2O95069 426 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 NKX2-2O95096 273 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 TGDSO95455 350 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 PMS2P2O95744 297 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 IGHV1-69P01742 117 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 IGHV1-46P01743 117 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 S100BP04271 92 aaPredicted RBP3.01□□□□□ -1.93
HERC1-211ENST00000560983 LCKP06239 509 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 DUX4L2P0CJ85 424 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 DUX4L3P0CJ86 424 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 DUX4L5P0CJ88 424 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 DUX4L6P0CJ89 424 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 DUX4L7P0CJ90 424 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 MYF6P23409 242 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 CFHR2P36980 270 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 MAGEA6P43360 314 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 SELENOVP59797 346 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 GNB2P62879 340 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 BASP1P80723 227 aaKnown RBP3.01□□□□□ -1.93
HERC1-211ENST00000560983 ARF1P84077 181 aaKnown RBP3.01□□□□□ -1.93
HERC1-211ENST00000560983 CDK16Q00536 496 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 SLC3A1Q07837 685 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 SNX1Q13596 522 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 CBFBQ13951 182 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 QPRTQ15274 297 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 CCNG2Q16589 344 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 NDUFAF6Q330K2 333 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 KLHL26Q53HC5 615 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 ESCO2Q56NI9 601 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 SYT14P1Q58G82 188 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 TMEM255AQ5JRV8 349 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 TEX35Q5T0J7 233 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.01□□□□□ -1.93
HERC1-211ENST00000560983 GKAP1Q5VSY0 366 aaPredicted RBP3.01□□□□□ -1.93
HERC1-211ENST00000560983 LIPJQ5W064 366 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 STEAP4Q687X5 459 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 C3orf33Q6P1S2 294 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 WDR93Q6P2C0 686 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 DUX4L9Q6RFH8 374 aaPredicted RBP3.01□□□□□ -1.93
HERC1-211ENST00000560983 TMEM107Q6UX40 140 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 FRA10AC1Q70Z53 315 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 AAED1Q7RTV5 226 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 COMMD6Q7Z4G1 85 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 GALNT7Q86SF2 657 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 CALHM3Q86XJ0 350 aa3.01□□□□□ -1.93
HERC1-211ENST00000560983 ZBED8Q8IZ13 594 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms