RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, human

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP8-209	ENST00000560297	RERGL	Q9H628	205 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	SEC61A2	Q9H9S3	476 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	SIAE	Q9HAT2	523 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	MOV10	Q9HCE1	1003 aa	Known RBP	10.76	□□□□□ -0.69
USP8-209	ENST00000560297	NPDC1	Q9NQX5	325 aa	Predicted RBP	10.76	□□□□□ -0.69
USP8-209	ENST00000560297	SLC17A5	Q9NRA2	495 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	H2AFY2	Q9P0M6	372 aa	Predicted RBP	10.76	□□□□□ -0.69
USP8-209	ENST00000560297	NDRG4	Q9ULP0	352 aa	Known RBP	10.76	□□□□□ -0.69
USP8-209	ENST00000560297	MOK	Q9UQ07	419 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	COA3	Q9Y2R0	106 aa	Predicted RBP	10.76	□□□□□ -0.69
USP8-209	ENST00000560297	SPTBN1	Q01082	2364 aa	Known RBP	10.76	□□□□□ -0.69
USP8-209	ENST00000560297	DOPEY1	Q5JWR5	2465 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	HELZ2	Q9BYK8	2649 aa	Known RBP	10.75	□□□□□ -0.69
USP8-209	ENST00000560297	ARPC4-TTLL3	A0A0A6YYG9	625 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	IGLV1-36	A0A0B4J1U3	117 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	CASK	O14936	926 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	TLX2	O43763	284 aa	Predicted RBP	10.75	□□□□□ -0.69
USP8-209	ENST00000560297	CLDN1	O95832	211 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	WNT11	O96014	354 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	IGFBP2	P18065	325 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	GRN	P28799	593 aa	Known RBP	10.75	□□□□□ -0.69
USP8-209	ENST00000560297	KIR2DL3	P43628	341 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	UBE2N	P61088	152 aa	Known RBP	10.75	□□□□□ -0.69
USP8-209	ENST00000560297	HSF2	Q03933	536 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	KEAP1	Q14145	624 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	TSC22D1	Q15714	1073 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	ETFDH	Q16134	617 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	SGCA	Q16586	387 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	TBRG1	Q3YBR2	411 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	FAM27B	Q5VT28	67 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	FOXL2NB	Q6ZUU3	175 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	CPO	Q8IVL8	374 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	DMRTC2	Q8IXT2	367 aa	Predicted RBP	10.75	□□□□□ -0.69
USP8-209	ENST00000560297	TCEANC	Q8N8B7	351 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	ACBD4	Q8NC06	268 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	PROKR2	Q8NFJ6	384 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	TMEM163	Q8TC26	289 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	NANOS1	Q8WY41	292 aa	Known RBP	10.75	□□□□□ -0.69
USP8-209	ENST00000560297	OTULIN	Q96BN8	352 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	WFIKKN1	Q96NZ8	548 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	TSSK2	Q96PF2	358 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	PITX2	Q99697	317 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	MED18	Q9BUE0	208 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	KCNN2	Q9H2S1	579 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	NELFA	Q9H3P2	528 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	IMPAD1	Q9NX62	359 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	ZNF226	Q9NYT6	803 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	AMDHD2	Q9Y303	409 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	UGT2A1	Q9Y4X1	527 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	GMPPB	Q9Y5P6	360 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	FREM1	Q5H8C1	2179 aa		10.75	□□□□□ -0.69
USP8-209	ENST00000560297	USP9X	Q93008	2570 aa	Predicted RBP	10.74	□□□□□ -0.69
USP8-209	ENST00000560297	FLNC	Q14315	2725 aa		10.74	□□□□□ -0.69
USP8-209	ENST00000560297	FASN	P49327	2511 aa	Known RBP	10.74	□□□□□ -0.69
USP8-209	ENST00000560297		A0A096LPE4	126 aa		10.74	□□□□□ -0.69
USP8-209	ENST00000560297		A0A1W2PPL8	197 aa		10.74	□□□□□ -0.69
USP8-209	ENST00000560297		A0A1W2PPZ6	126 aa		10.74	□□□□□ -0.69
USP8-209	ENST00000560297		H0YAE9	185 aa		10.74	□□□□□ -0.69
USP8-209	ENST00000560297	DCTN6	O00399	190 aa		10.74	□□□□□ -0.69
USP8-209	ENST00000560297	PRODH	O43272	600 aa		10.74	□□□□□ -0.69
USP8-209	ENST00000560297	PRKY	O43930	277 aa		10.74	□□□□□ -0.69
USP8-209	ENST00000560297	MPZL2	O60487	215 aa		10.74	□□□□□ -0.69
USP8-209	ENST00000560297	HRG	P04196	525 aa		10.74	□□□□□ -0.69
USP8-209	ENST00000560297	SPI1	P17947	270 aa		10.74	□□□□□ -0.69
USP8-209	ENST00000560297	MSR1	P21757	451 aa		10.74	□□□□□ -0.69
USP8-209	ENST00000560297	FMO3	P31513	532 aa		10.74	□□□□□ -0.69
USP8-209	ENST00000560297	CCKAR	P32238	428 aa		10.74	□□□□□ -0.69
USP8-209	ENST00000560297	CDA	P32320	146 aa		10.74	□□□□□ -0.69
USP8-209	ENST00000560297	LSM6	P62312	80 aa	Known RBP	10.74	□□□□□ -0.69
USP8-209	ENST00000560297	PPA1	Q15181	289 aa		10.74	□□□□□ -0.69
USP8-209	ENST00000560297	KCNMB1	Q16558	191 aa		10.74	□□□□□ -0.69
USP8-209	ENST00000560297	SLC35D3	Q5M8T2	416 aa		10.74	□□□□□ -0.69
USP8-209	ENST00000560297	SLC25A30	Q5SVS4	291 aa		10.74	□□□□□ -0.69
USP8-209	ENST00000560297	SP5	Q6BEB4	398 aa	Predicted RBP	10.74	□□□□□ -0.69
USP8-209	ENST00000560297	PLBD1	Q6P4A8	553 aa		10.74	□□□□□ -0.69
USP8-209	ENST00000560297	CXXC5	Q7LFL8	322 aa	Known RBP	10.74	□□□□□ -0.69
USP8-209	ENST00000560297	FAM169B	Q8N8A8	192 aa		10.74	□□□□□ -0.69
USP8-209	ENST00000560297	WDR31	Q8NA23	367 aa		10.74	□□□□□ -0.69
USP8-209	ENST00000560297	FAM81A	Q8TBF8	368 aa		10.74	□□□□□ -0.69
USP8-209	ENST00000560297	FAM222B	Q8WU58	562 aa		10.74	□□□□□ -0.69
USP8-209	ENST00000560297	CYGB	Q8WWM9	190 aa		10.74	□□□□□ -0.69
USP8-209	ENST00000560297	APOL4	Q9BPW4	351 aa		10.74	□□□□□ -0.69
USP8-209	ENST00000560297	NGB	Q9NPG2	151 aa		10.74	□□□□□ -0.69
USP8-209	ENST00000560297	HINT3	Q9NQE9	182 aa	Known RBP	10.74	□□□□□ -0.69
USP8-209	ENST00000560297		A1L4Q6	167 aa		10.73	□□□□□ -0.69
USP8-209	ENST00000560297	SH3D21	A4FU49	640 aa		10.73	□□□□□ -0.69
USP8-209	ENST00000560297	FAM183A	A6NL82	134 aa		10.73	□□□□□ -0.69
USP8-209	ENST00000560297	C12orf71	A8MTZ7	269 aa		10.73	□□□□□ -0.69
USP8-209	ENST00000560297	C19orf84	I3L1E1	186 aa		10.73	□□□□□ -0.69
USP8-209	ENST00000560297	GLCE	O94923	617 aa		10.73	□□□□□ -0.69
USP8-209	ENST00000560297	UBL3	O95164	117 aa		10.73	□□□□□ -0.69
USP8-209	ENST00000560297	HLA-DQA2	P01906	255 aa		10.73	□□□□□ -0.69
USP8-209	ENST00000560297	CST2	P09228	141 aa		10.73	□□□□□ -0.69
USP8-209	ENST00000560297	EPX	P11678	715 aa		10.73	□□□□□ -0.69
USP8-209	ENST00000560297	B4GALT1	P15291	398 aa		10.73	□□□□□ -0.69
USP8-209	ENST00000560297	ARR3	P36575	388 aa		10.73	□□□□□ -0.69
USP8-209	ENST00000560297	VHL	P40337	213 aa		10.73	□□□□□ -0.69
USP8-209	ENST00000560297	HSPA13	P48723	471 aa		10.73	□□□□□ -0.69
USP8-209	ENST00000560297	PCBD1	P61457	104 aa		10.73	□□□□□ -0.69
USP8-209	ENST00000560297	SNRPG	P62308	76 aa	Known RBP	10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms