RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 FARS2O95363 451 aaKnown RBP12.6□□□□□ -0.39
SMAD6-204ENST00000559931 CLIC3O95833 236 aa12.6□□□□□ -0.39
SMAD6-204ENST00000559931 CLUP10909 449 aa12.6□□□□□ -0.39
SMAD6-204ENST00000559931 B4GALT1P15291 398 aa12.6□□□□□ -0.39
SMAD6-204ENST00000559931 SPI1P17947 270 aa12.6□□□□□ -0.39
SMAD6-204ENST00000559931 LAP3P28838 519 aa12.6□□□□□ -0.39
SMAD6-204ENST00000559931 HOXC12P31275 282 aa12.6□□□□□ -0.39
SMAD6-204ENST00000559931 UGT2B10P36537 528 aa12.6□□□□□ -0.39
SMAD6-204ENST00000559931 CAPZA2P47755 286 aa12.6□□□□□ -0.39
SMAD6-204ENST00000559931 HSPA13P48723 471 aa12.6□□□□□ -0.39
SMAD6-204ENST00000559931 SLC25A1P53007 311 aa12.6□□□□□ -0.39
SMAD6-204ENST00000559931 ADARB1P78563 741 aaKnown RBP12.6□□□□□ -0.39
SMAD6-204ENST00000559931 IL5RAQ01344 420 aa12.6□□□□□ -0.39
SMAD6-204ENST00000559931 KEAP1Q14145 624 aa12.6□□□□□ -0.39
SMAD6-204ENST00000559931 STK11Q15831 433 aa12.6□□□□□ -0.39
SMAD6-204ENST00000559931 FBXL19-AS1Q494R0 122 aa12.6□□□□□ -0.39
SMAD6-204ENST00000559931 ANKRD16Q6P6B7 361 aa12.6□□□□□ -0.39
SMAD6-204ENST00000559931 GLB1L2Q8IW92 636 aa12.6□□□□□ -0.39
SMAD6-204ENST00000559931 SETD9Q8NE22 299 aa12.6□□□□□ -0.39
SMAD6-204ENST00000559931 OR1K1Q8NGR3 316 aa12.6□□□□□ -0.39
SMAD6-204ENST00000559931 OR6K6Q8NGW6 343 aa12.6□□□□□ -0.39
SMAD6-204ENST00000559931 TRUB1Q8WWH5 349 aaKnown RBP12.6□□□□□ -0.39
SMAD6-204ENST00000559931 PITX2Q99697 317 aa12.6□□□□□ -0.39
SMAD6-204ENST00000559931 KCNN2Q9H2S1 579 aa12.6□□□□□ -0.39
SMAD6-204ENST00000559931 HINT3Q9NQE9 182 aaKnown RBP12.6□□□□□ -0.39
SMAD6-204ENST00000559931 TMEM38BQ9NVV0 291 aa12.6□□□□□ -0.39
SMAD6-204ENST00000559931 HCFC1P51610 2035 aa12.6□□□□□ -0.39
SMAD6-204ENST00000559931 DOPEY1Q5JWR5 2465 aa12.6□□□□□ -0.39
SMAD6-204ENST00000559931 MPZL2O60487 215 aa12.59□□□□□ -0.39
SMAD6-204ENST00000559931 OR8G3PP0DMU2 310 aa12.59□□□□□ -0.39
SMAD6-204ENST00000559931 NPR2P20594 1047 aa12.59□□□□□ -0.39
SMAD6-204ENST00000559931 PSMB1P20618 241 aaKnown RBP12.59□□□□□ -0.39
SMAD6-204ENST00000559931 COX5AP20674 150 aa12.59□□□□□ -0.39
SMAD6-204ENST00000559931 FMO3P31513 532 aa12.59□□□□□ -0.39
SMAD6-204ENST00000559931 ZNF133P52736 654 aaPredicted RBP12.59□□□□□ -0.39
SMAD6-204ENST00000559931 UBE2NP61088 152 aaKnown RBP12.59□□□□□ -0.39
SMAD6-204ENST00000559931 GLO1Q04760 184 aa12.59□□□□□ -0.39
SMAD6-204ENST00000559931 APOFQ13790 326 aa12.59□□□□□ -0.39
SMAD6-204ENST00000559931 GABRA6Q16445 453 aa12.59□□□□□ -0.39
SMAD6-204ENST00000559931 HIKESHIQ53FT3 197 aa12.59□□□□□ -0.39
SMAD6-204ENST00000559931 KLHL24Q6TFL4 600 aa12.59□□□□□ -0.39
SMAD6-204ENST00000559931 BCDIN3DQ7Z5W3 292 aaKnown RBP12.59□□□□□ -0.39
SMAD6-204ENST00000559931 ZBTB46Q86UZ6 589 aa12.59□□□□□ -0.39
SMAD6-204ENST00000559931 LRRC18Q8N456 261 aa12.59□□□□□ -0.39
SMAD6-204ENST00000559931 SLC22A24Q8N4F4 322 aa12.59□□□□□ -0.39
SMAD6-204ENST00000559931 BBS1Q8NFJ9 593 aa12.59□□□□□ -0.39
SMAD6-204ENST00000559931 OR10H5Q8NGA6 315 aa12.59□□□□□ -0.39
SMAD6-204ENST00000559931 HTRA1Q92743 480 aa12.59□□□□□ -0.39
SMAD6-204ENST00000559931 TFAP2CQ92754 450 aa12.59□□□□□ -0.39
SMAD6-204ENST00000559931 BCL2L2Q92843 193 aaPredicted RBP12.59□□□□□ -0.39
SMAD6-204ENST00000559931 S100PBPQ96BU1 408 aa12.59□□□□□ -0.39
SMAD6-204ENST00000559931 MUCL1Q96DR8 90 aa12.59□□□□□ -0.39
SMAD6-204ENST00000559931 MUS81Q96NY9 551 aa12.59□□□□□ -0.39
SMAD6-204ENST00000559931 HCAR1Q9BXC0 346 aa12.59□□□□□ -0.39
SMAD6-204ENST00000559931 NMNAT2Q9BZQ4 307 aa12.59□□□□□ -0.39
SMAD6-204ENST00000559931 ACTR6Q9GZN1 396 aa12.59□□□□□ -0.39
SMAD6-204ENST00000559931 CLN6Q9NWW5 311 aa12.59□□□□□ -0.39
SMAD6-204ENST00000559931 ZNF226Q9NYT6 803 aa12.59□□□□□ -0.39
SMAD6-204ENST00000559931 UGT2A1Q9Y4X1 527 aa12.59□□□□□ -0.39
SMAD6-204ENST00000559931 USP9YO00507 2555 aaPredicted RBP12.59□□□□□ -0.39
SMAD6-204ENST00000559931 PTPN13Q12923 2485 aa12.59□□□□□ -0.39
SMAD6-204ENST00000559931 IGLV1-36A0A0B4J1U3 117 aa12.58□□□□□ -0.4
SMAD6-204ENST00000559931 A0A1W2PR80 420 aa12.58□□□□□ -0.4
SMAD6-204ENST00000559931 A1L4Q6 167 aa12.58□□□□□ -0.4
SMAD6-204ENST00000559931 MPZL1O95297 269 aa12.58□□□□□ -0.4
SMAD6-204ENST00000559931 GPANK1O95872 356 aa12.58□□□□□ -0.4
SMAD6-204ENST00000559931 ZNF823P16415 610 aa12.58□□□□□ -0.4
SMAD6-204ENST00000559931 GRNP28799 593 aaKnown RBP12.58□□□□□ -0.4
SMAD6-204ENST00000559931 BLVRAP53004 296 aa12.58□□□□□ -0.4
SMAD6-204ENST00000559931 MRPS34P82930 218 aaKnown RBP12.58□□□□□ -0.4
SMAD6-204ENST00000559931 EFNB1P98172 346 aa12.58□□□□□ -0.4
SMAD6-204ENST00000559931 IL18R1Q13478 541 aa12.58□□□□□ -0.4
SMAD6-204ENST00000559931 SNTB1Q13884 538 aaKnown RBP12.58□□□□□ -0.4
SMAD6-204ENST00000559931 TBRG1Q3YBR2 411 aa12.58□□□□□ -0.4
SMAD6-204ENST00000559931 ZNF691Q5VV52 312 aa12.58□□□□□ -0.4
SMAD6-204ENST00000559931 C8orf59Q8N0T1 100 aaPredicted RBP12.58□□□□□ -0.4
SMAD6-204ENST00000559931 C1orf162Q8NEQ5 155 aaPredicted RBP12.58□□□□□ -0.4
SMAD6-204ENST00000559931 ZC3HAV1LQ96H79 300 aaKnown RBP12.58□□□□□ -0.4
SMAD6-204ENST00000559931 Q96MT0 163 aa12.58□□□□□ -0.4
SMAD6-204ENST00000559931 SH3GL3Q99963 347 aa12.58□□□□□ -0.4
SMAD6-204ENST00000559931 USB1Q9BQ65 265 aaKnown RBP12.58□□□□□ -0.4
SMAD6-204ENST00000559931 CDADC1Q9BWV3 514 aa12.58□□□□□ -0.4
SMAD6-204ENST00000559931 RACGAP1Q9H0H5 632 aa12.58□□□□□ -0.4
SMAD6-204ENST00000559931 NELFAQ9H3P2 528 aa12.58□□□□□ -0.4
SMAD6-204ENST00000559931 RNF121Q9H920 327 aa12.58□□□□□ -0.4
SMAD6-204ENST00000559931 SIAEQ9HAT2 523 aa12.58□□□□□ -0.4
SMAD6-204ENST00000559931 EMC7Q9NPA0 242 aa12.58□□□□□ -0.4
SMAD6-204ENST00000559931 DNAJC27Q9NZQ0 273 aa12.58□□□□□ -0.4
SMAD6-204ENST00000559931 AASSQ9UDR5 926 aa12.58□□□□□ -0.4
SMAD6-204ENST00000559931 NDRG3Q9UGV2 375 aa12.58□□□□□ -0.4
SMAD6-204ENST00000559931 MOKQ9UQ07 419 aa12.58□□□□□ -0.4
SMAD6-204ENST00000559931 POLR1DQ9Y2S0 133 aa12.58□□□□□ -0.4
SMAD6-204ENST00000559931 SH3D21A4FU49 640 aa12.57□□□□□ -0.4
SMAD6-204ENST00000559931 TVP23AA6NH52 213 aa12.57□□□□□ -0.4
SMAD6-204ENST00000559931 PRSS44E7EML9 344 aa12.57□□□□□ -0.4
SMAD6-204ENST00000559931 E9PQ18 207 aa12.57□□□□□ -0.4
SMAD6-204ENST00000559931 PRODHO43272 600 aa12.57□□□□□ -0.4
SMAD6-204ENST00000559931 GLCEO94923 617 aa12.57□□□□□ -0.4
SMAD6-204ENST00000559931 GNAO1P09471 354 aa12.57□□□□□ -0.4
SMAD6-204ENST00000559931 CD79AP11912 226 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms