RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 NDUFAF7Q7L592 441 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 BPHLQ86WA6 291 aaPredicted RBP9.04□□□□□ -0.96
LRRC28-216ENST00000559819 ABCA7Q8IZY2 2146 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 OIT3Q8WWZ8 545 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 DAZLQ92904 295 aaKnown RBP9.04□□□□□ -0.96
LRRC28-216ENST00000559819 C8orf44Q96CB5 159 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 PIPOXQ9P0Z9 390 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 RABL2AQ9UBK7 228 aaPredicted RBP9.04□□□□□ -0.96
LRRC28-216ENST00000559819 FBXL3Q9UKT7 428 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 RABL2BQ9UNT1 228 aa9.04□□□□□ -0.96
LRRC28-216ENST00000559819 COA3Q9Y2R0 106 aaPredicted RBP9.04□□□□□ -0.96
LRRC28-216ENST00000559819 TRAV18A0A075B6X5 111 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 A0A1W2PQD3 144 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 SLC22A23A1A5C7 686 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 PLPP3O14495 311 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 ADAM10O14672 748 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 TO15178 435 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 XRCC3O43542 346 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 FADS1O60427 444 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 ICMTO60725 284 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 PRAF2O60831 178 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 NPIPB7O75200 414 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 ZNF432O94892 652 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 NDUFB6O95139 128 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 HRGP04196 525 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 SRFP11831 508 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 DCAF7P61962 342 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 FMODQ06828 376 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 EXOSC2Q13868 293 aaKnown RBP9.03□□□□□ -0.96
LRRC28-216ENST00000559819 SLC18B1Q6NT16 456 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 KRT77Q7Z794 578 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 EID2Q8N6I1 236 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 ZNF441Q8N8Z8 693 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 OR4C16Q8NGL9 310 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 DVL3Q92997 716 aaPredicted RBP9.03□□□□□ -0.96
LRRC28-216ENST00000559819 MNTQ99583 582 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 MRI1Q9BV20 369 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 CHRNA10Q9GZZ6 450 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 RAB33BQ9H082 229 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 TXNIPQ9H3M7 391 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 ZNF275Q9NSD4 429 aaPredicted RBP9.03□□□□□ -0.96
LRRC28-216ENST00000559819 TAS2R4Q9NYW5 299 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 MYEF2Q9P2K5 600 aaKnown RBP9.03□□□□□ -0.96
LRRC28-216ENST00000559819 PPIEQ9UNP9 301 aaKnown RBP9.03□□□□□ -0.96
LRRC28-216ENST00000559819 NUP210LQ5VU65 1888 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 LOC101059948A0A1B0GTJ6 334 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 GGT3PA6NGU5 568 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 SHISA8B8ZZ34 492 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 SOX1O00570 391 aaPredicted RBP9.03□□□□□ -0.96
LRRC28-216ENST00000559819 PHYHO14832 338 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 SIX6O95475 246 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 BCKDHBP21953 392 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 MNDAP41218 407 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 EPHA4P54764 986 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 MRPS10P82664 201 aaKnown RBP9.03□□□□□ -0.96
LRRC28-216ENST00000559819 C2orf68Q2NKX9 166 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 COL28A1Q2UY09 1125 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 C2orf76Q3KRA6 126 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 LINC00346Q8IVM7 164 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 ZNF679Q8IYX0 411 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 ELMOD2Q8IZ81 293 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 D2HGDHQ8N465 521 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 RNF128Q8TEB7 428 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 MVB12AQ96EY5 273 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 NUDT22Q9BRQ3 303 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 ABHD6Q9BV23 337 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 PTTG3PQ9NZH4 202 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 VSX1Q9NZR4 365 aaPredicted RBP9.03□□□□□ -0.96
LRRC28-216ENST00000559819 CGGBP1Q9UFW8 167 aaPredicted RBP9.03□□□□□ -0.96
LRRC28-216ENST00000559819 LRP12Q9Y561 859 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 SPAG17Q6Q759 2223 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 CIB4A0PJX0 185 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 A8MVM7 634 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 MBTPS2O43462 519 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 LMX1BO60663 402 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 DXOO77932 396 aaKnown RBP9.03□□□□□ -0.96
LRRC28-216ENST00000559819 MT-ATP6P00846 226 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 PNLIPRP2P54317 469 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 FBXW4P57775 412 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 OC90Q02509 493 aaPredicted RBP9.03□□□□□ -0.96
LRRC28-216ENST00000559819 RAB11BQ15907 218 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 NUP54Q7Z3B4 507 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 MEIOBQ8N635 442 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 OR8S1Q8NH09 359 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 FAM3DQ96BQ1 224 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 GINS4Q9BRT9 223 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 SLC22A11Q9NSA0 550 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 DHDHQ9UQ10 334 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 HRH3Q9Y5N1 445 aa9.03□□□□□ -0.96
LRRC28-216ENST00000559819 RP1P56715 2156 aa9.02□□□□□ -0.97
LRRC28-216ENST00000559819 IGKV1D-43A0A0B4J1Z2 117 aa9.02□□□□□ -0.97
LRRC28-216ENST00000559819 TMEM272A0A1B0GTI8 110 aa9.02□□□□□ -0.97
LRRC28-216ENST00000559819 A0A1B0GX78 115 aa9.02□□□□□ -0.97
LRRC28-216ENST00000559819 H7C417 338 aa9.02□□□□□ -0.97
LRRC28-216ENST00000559819 DUX1O43812 170 aa9.02□□□□□ -0.97
LRRC28-216ENST00000559819 RBBP9O75884 186 aa9.02□□□□□ -0.97
LRRC28-216ENST00000559819 AHSA1O95433 338 aa9.02□□□□□ -0.97
LRRC28-216ENST00000559819 PSMA6P60900 246 aaKnown RBP9.02□□□□□ -0.97
LRRC28-216ENST00000559819 PUDPQ08623 228 aa9.02□□□□□ -0.97
LRRC28-216ENST00000559819 SNTA1Q13424 505 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms