RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 TMEM154Q6P9G4 183 aa17.5■□□□□ 0.39
TSPAN3-206ENST00000559373 GLCCI1Q86VQ1 547 aa17.5■□□□□ 0.39
TSPAN3-206ENST00000559373 OR8J3Q8NGG0 315 aa17.5■□□□□ 0.39
TSPAN3-206ENST00000559373 OR1J1Q8NGS3 322 aa17.5■□□□□ 0.39
TSPAN3-206ENST00000559373 C11orf40Q8WZ69 217 aa17.5■□□□□ 0.39
TSPAN3-206ENST00000559373 LRRC37BQ96QE4 947 aa17.5■□□□□ 0.39
TSPAN3-206ENST00000559373 RACGAP1Q9H0H5 632 aa17.5■□□□□ 0.39
TSPAN3-206ENST00000559373 METTL17Q9H7H0 456 aaPredicted RBP17.5■□□□□ 0.39
TSPAN3-206ENST00000559373 CCNB1IP1Q9NPC3 277 aa17.5■□□□□ 0.39
TSPAN3-206ENST00000559373 SAR1AQ9NR31 198 aa17.5■□□□□ 0.39
TSPAN3-206ENST00000559373 ZNF346Q9UL40 294 aaKnown RBP17.5■□□□□ 0.39
TSPAN3-206ENST00000559373 MED31Q9Y3C7 131 aa17.5■□□□□ 0.39
TSPAN3-206ENST00000559373 UGT2A1Q9Y4X1 527 aa17.5■□□□□ 0.39
TSPAN3-206ENST00000559373 J3KTA2 159 aa17.49■□□□□ 0.39
TSPAN3-206ENST00000559373 TPD52L2O43399 206 aaKnown RBP17.49■□□□□ 0.39
TSPAN3-206ENST00000559373 TCF21O43680 179 aa17.49■□□□□ 0.39
TSPAN3-206ENST00000559373 MGRN1O60291 552 aa17.49■□□□□ 0.39
TSPAN3-206ENST00000559373 GAAP10253 952 aa17.49■□□□□ 0.39
TSPAN3-206ENST00000559373 IFI30P13284 250 aa17.49■□□□□ 0.39
TSPAN3-206ENST00000559373 H2AFXP16104 143 aaPredicted RBP17.49■□□□□ 0.39
TSPAN3-206ENST00000559373 RBM34P42696 430 aaKnown RBP17.49■□□□□ 0.39
TSPAN3-206ENST00000559373 SELENOVP59797 346 aa17.49■□□□□ 0.39
TSPAN3-206ENST00000559373 LMO4P61968 165 aa17.49■□□□□ 0.39
TSPAN3-206ENST00000559373 LIPNQ5VXI9 398 aa17.49■□□□□ 0.39
TSPAN3-206ENST00000559373 POU5F2Q8N7G0 328 aa17.49■□□□□ 0.39
TSPAN3-206ENST00000559373 ZNF519Q8TB69 540 aa17.49■□□□□ 0.39
TSPAN3-206ENST00000559373 SNX33Q8WV41 574 aa17.49■□□□□ 0.39
TSPAN3-206ENST00000559373 NABP1Q96AH0 204 aa17.49■□□□□ 0.39
TSPAN3-206ENST00000559373 TMEM186Q96B77 213 aa17.49■□□□□ 0.39
TSPAN3-206ENST00000559373 SH3GL1Q99961 368 aa17.49■□□□□ 0.39
TSPAN3-206ENST00000559373 SIKE1Q9BRV8 207 aa17.49■□□□□ 0.39
TSPAN3-206ENST00000559373 VIPAS39Q9H9C1 493 aa17.49■□□□□ 0.39
TSPAN3-206ENST00000559373 SNX13Q9Y5W8 968 aa17.49■□□□□ 0.39
TSPAN3-206ENST00000559373 TENM1Q9UKZ4 2725 aa17.49■□□□□ 0.39
TSPAN3-206ENST00000559373 DOCK11Q5JSL3 2073 aa17.49■□□□□ 0.39
TSPAN3-206ENST00000559373 IGLV3-9A0A075B6K5 115 aa17.48■□□□□ 0.39
TSPAN3-206ENST00000559373 ENTPD5O75356 428 aa17.48■□□□□ 0.39
TSPAN3-206ENST00000559373 MAKP20794 623 aa17.48■□□□□ 0.39
TSPAN3-206ENST00000559373 STOMP27105 288 aa17.48■□□□□ 0.39
TSPAN3-206ENST00000559373 KDELR2P33947 212 aa17.48■□□□□ 0.39
TSPAN3-206ENST00000559373 MPV17P39210 176 aa17.48■□□□□ 0.39
TSPAN3-206ENST00000559373 WNT5AP41221 380 aa17.48■□□□□ 0.39
TSPAN3-206ENST00000559373 RAD52P43351 418 aa17.48■□□□□ 0.39
TSPAN3-206ENST00000559373 TMEM33P57088 247 aa17.48■□□□□ 0.39
TSPAN3-206ENST00000559373 THEM4Q5T1C6 240 aa17.48■□□□□ 0.39
TSPAN3-206ENST00000559373 C10orf128Q5T292 105 aa17.48■□□□□ 0.39
TSPAN3-206ENST00000559373 VTCN1Q7Z7D3 282 aa17.48■□□□□ 0.39
TSPAN3-206ENST00000559373 ZNF101Q8IZC7 436 aa17.48■□□□□ 0.39
TSPAN3-206ENST00000559373 OR1J2Q8NGS2 313 aa17.48■□□□□ 0.39
TSPAN3-206ENST00000559373 SEPHS2Q99611 448 aa17.48■□□□□ 0.39
TSPAN3-206ENST00000559373 KCNN2Q9H2S1 579 aa17.48■□□□□ 0.39
TSPAN3-206ENST00000559373 ARMCX1Q9P291 453 aa17.48■□□□□ 0.39
TSPAN3-206ENST00000559373 A4GNTQ9UNA3 340 aa17.48■□□□□ 0.39
TSPAN3-206ENST00000559373 LOC100509620A0A075B734 347 aa17.47■□□□□ 0.39
TSPAN3-206ENST00000559373 TRAV27A0A087WT01 109 aa17.47■□□□□ 0.39
TSPAN3-206ENST00000559373 SLC22A23A1A5C7 686 aa17.47■□□□□ 0.39
TSPAN3-206ENST00000559373 C5orf49A4QMS7 147 aa17.47■□□□□ 0.39
TSPAN3-206ENST00000559373 SPRY3O43610 288 aa17.47■□□□□ 0.39
TSPAN3-206ENST00000559373 SNAP29O95721 258 aa17.47■□□□□ 0.39
TSPAN3-206ENST00000559373 PTHP01270 115 aa17.47■□□□□ 0.39
TSPAN3-206ENST00000559373 MSMBP08118 114 aa17.47■□□□□ 0.39
TSPAN3-206ENST00000559373 TROVE2P10155 538 aaKnown RBP eCLIP17.47■□□□□ 0.39
TSPAN3-206ENST00000559373 DRD4P21917 467 aa17.47■□□□□ 0.39
TSPAN3-206ENST00000559373 PSG4Q00888 419 aa17.47■□□□□ 0.39
TSPAN3-206ENST00000559373 ALG10Q5BKT4 473 aa17.47■□□□□ 0.39
TSPAN3-206ENST00000559373 FAHD2BQ6P2I3 314 aaPredicted RBP17.47■□□□□ 0.39
TSPAN3-206ENST00000559373 ERICH5Q6P6B1 374 aa17.47■□□□□ 0.39
TSPAN3-206ENST00000559373 SLC25A47Q6Q0C1 308 aa17.47■□□□□ 0.39
TSPAN3-206ENST00000559373 USP51Q70EK9 711 aa17.47■□□□□ 0.39
TSPAN3-206ENST00000559373 RFLNBQ8N5W9 214 aa17.47■□□□□ 0.39
TSPAN3-206ENST00000559373 OR51A7Q8NH64 312 aa17.47■□□□□ 0.39
TSPAN3-206ENST00000559373 NMD3Q96D46 503 aaKnown RBP17.47■□□□□ 0.39
TSPAN3-206ENST00000559373 BPIFA2Q96DR5 249 aa17.47■□□□□ 0.39
TSPAN3-206ENST00000559373 FAHD2AQ96GK7 314 aa17.47■□□□□ 0.39
TSPAN3-206ENST00000559373 BCL2L14Q9BZR8 327 aa17.47■□□□□ 0.39
TSPAN3-206ENST00000559373 LRMDAQ9H2I8 198 aa17.47■□□□□ 0.39
TSPAN3-206ENST00000559373 TXNIPQ9H3M7 391 aa17.47■□□□□ 0.39
TSPAN3-206ENST00000559373 SIAEQ9HAT2 523 aa17.47■□□□□ 0.39
TSPAN3-206ENST00000559373 ARGLU1Q9NWB6 273 aaPredicted RBP17.47■□□□□ 0.39
TSPAN3-206ENST00000559373 METRNQ9UJH8 293 aa17.47■□□□□ 0.39
TSPAN3-206ENST00000559373 FAM220BPB1ANY3 271 aa17.46■□□□□ 0.39
TSPAN3-206ENST00000559373 H7C1C5 153 aa17.46■□□□□ 0.39
TSPAN3-206ENST00000559373 VIMP08670 466 aaKnown RBP17.46■□□□□ 0.39
TSPAN3-206ENST00000559373 TSPAN19P0C672 248 aa17.46■□□□□ 0.39
TSPAN3-206ENST00000559373 LAP3P28838 519 aa17.46■□□□□ 0.39
TSPAN3-206ENST00000559373 ZNF133P52736 654 aaPredicted RBP17.46■□□□□ 0.39
TSPAN3-206ENST00000559373 CTXN1P60606 82 aa17.46■□□□□ 0.39
TSPAN3-206ENST00000559373 LCN6P62502 163 aa17.46■□□□□ 0.39
TSPAN3-206ENST00000559373 MRPS34P82930 218 aaKnown RBP17.46■□□□□ 0.39
TSPAN3-206ENST00000559373 SPRNQ5BIV9 151 aa17.46■□□□□ 0.39
TSPAN3-206ENST00000559373 OTPQ5XKR4 325 aa17.46■□□□□ 0.39
TSPAN3-206ENST00000559373 DPPA2Q7Z7J5 298 aa17.46■□□□□ 0.39
TSPAN3-206ENST00000559373 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.46■□□□□ 0.39
TSPAN3-206ENST00000559373 OR2T12Q8NG77 320 aa17.46■□□□□ 0.39
TSPAN3-206ENST00000559373 SLC25A40Q8TBP6 338 aa17.46■□□□□ 0.39
TSPAN3-206ENST00000559373 IPCEF1Q8WWN9 437 aaPredicted RBP17.46■□□□□ 0.39
TSPAN3-206ENST00000559373 RCN3Q96D15 328 aa17.46■□□□□ 0.39
TSPAN3-206ENST00000559373 ZNF416Q9BWM5 594 aa17.46■□□□□ 0.39
TSPAN3-206ENST00000559373 C1orf198Q9H425 327 aa17.46■□□□□ 0.39
TSPAN3-206ENST00000559373 DECR2Q9NUI1 292 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms