RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 CMTM4Q8IZR5 234 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 PRSS35Q8N3Z0 413 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 OR52N5Q8NH56 324 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 M1APQ8TC57 530 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 TSEN15Q8WW01 171 aaKnown RBP10.13□□□□□ -0.79
CLPX-204ENST00000559152 MCHR2Q969V1 340 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 UPRTQ96BW1 309 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 RBP7Q96R05 134 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 KCNK17Q96T54 332 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 GFI1Q99684 422 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 ZNF700Q9H0M5 742 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 KLHL9Q9P2J3 617 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 NUFIP1Q9UHK0 495 aaKnown RBP10.13□□□□□ -0.79
CLPX-204ENST00000559152 COA3Q9Y2R0 106 aaPredicted RBP10.13□□□□□ -0.79
CLPX-204ENST00000559152 NUBP2Q9Y5Y2 271 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 ALG5Q9Y673 324 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 CABIN1Q9Y6J0 2220 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 FER1L5A0AVI2 2057 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 SPEGQ15772 3267 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 A0A087WZY1 265 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 A0A0B4J203 849 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 TTLL8A6PVC2 850 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 LANCL1O43813 399 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 GPANK1O95872 356 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 IGHEP01854 428 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 CD2P06729 351 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 PTGS2P35354 604 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 MNDAP41218 407 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 POU3F1Q03052 451 aaPredicted RBP10.13□□□□□ -0.79
CLPX-204ENST00000559152 PCK2Q16822 640 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 LRRC69Q6ZNQ3 347 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 NCCRP1Q6ZVX7 275 aaPredicted RBP10.13□□□□□ -0.79
CLPX-204ENST00000559152 FCRLAQ7L513 359 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 LRRTM1Q86UE6 522 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 DTX3Q8N9I9 347 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 OR2M3Q8NG83 312 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 OR4K17Q8NGC6 315 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 MIB2Q96AX9 1013 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 ZBTB8AQ96BR9 441 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 AMELYQ99218 206 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 ABHD6Q9BV23 337 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 ING3Q9NXR8 418 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 CKLFQ9UBR5 152 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 POU2F3Q9UKI9 436 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 FBXO4Q9UKT5 387 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 N6AMT1Q9Y5N5 214 aa10.13□□□□□ -0.79
CLPX-204ENST00000559152 IGHV1-45A0A0A0MS14 117 aa10.12□□□□□ -0.79
CLPX-204ENST00000559152 A0A0B4J293 547 aa10.12□□□□□ -0.79
CLPX-204ENST00000559152 GABARAPH6UMI1 98 aa10.12□□□□□ -0.79
CLPX-204ENST00000559152 ATP6V1G1O75348 118 aa10.12□□□□□ -0.79
CLPX-204ENST00000559152 DKK1O94907 266 aa10.12□□□□□ -0.79
CLPX-204ENST00000559152 HLA-DOBP13765 273 aa10.12□□□□□ -0.79
CLPX-204ENST00000559152 ARSBP15848 533 aa10.12□□□□□ -0.79
CLPX-204ENST00000559152 RPS27P42677 84 aaKnown RBP10.12□□□□□ -0.79
CLPX-204ENST00000559152 RAG2P55895 527 aa10.12□□□□□ -0.79
CLPX-204ENST00000559152 GPR85P60893 370 aa10.12□□□□□ -0.79
CLPX-204ENST00000559152 TCTE3Q8IZS6 198 aa10.12□□□□□ -0.79
CLPX-204ENST00000559152 SLC26A10Q8NG04 563 aa10.12□□□□□ -0.79
CLPX-204ENST00000559152 HAVCR1Q96D42 359 aa10.12□□□□□ -0.79
CLPX-204ENST00000559152 GTPBP2Q9BX10 602 aaKnown RBP10.12□□□□□ -0.79
CLPX-204ENST00000559152 ULBP3Q9BZM4 244 aa10.12□□□□□ -0.79
CLPX-204ENST00000559152 ACTR6Q9GZN1 396 aa10.12□□□□□ -0.79
CLPX-204ENST00000559152 PLEKHA1Q9HB21 404 aa10.12□□□□□ -0.79
CLPX-204ENST00000559152 ANKRD10Q9NXR5 420 aa10.12□□□□□ -0.79
CLPX-204ENST00000559152 STEAP1Q9UHE8 339 aa10.12□□□□□ -0.79
CLPX-204ENST00000559152 PTRH2Q9Y3E5 179 aaKnown RBP10.12□□□□□ -0.79
CLPX-204ENST00000559152 NAP1L6A6NFF2 107 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 PATE3B3GLJ2 98 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 H3BML4 177 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 YES1P07947 543 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 CD3GP09693 182 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 GSTT2BP0CG30 244 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 IL11P20809 199 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 KIR3DL2P43630 455 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 MRPS15P82914 257 aaKnown RBP10.11□□□□□ -0.79
CLPX-204ENST00000559152 MYBPHQ13203 477 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 SNTB2Q13425 540 aaKnown RBP10.11□□□□□ -0.79
CLPX-204ENST00000559152 ETFDHQ16134 617 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 TMEM69Q5SWH9 247 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 THEM4Q5T1C6 240 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 LINGO2Q7L985 606 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 TMPRSS12Q86WS5 348 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 GLB1L2Q8IW92 636 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 UEVLDQ8IX04 471 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 KDM8Q8N371 416 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 FADS6Q8N9I5 356 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 OR10H5Q8NGA6 315 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 OR2I1PQ8NGU4 316 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 SYNPRQ8TBG9 265 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 FCAMRQ8WWV6 532 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 AKAP1Q92667 903 aaKnown RBP eCLIP10.11□□□□□ -0.79
CLPX-204ENST00000559152 ORAI1Q96D31 301 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 OR5V1Q9UGF6 321 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 ING1Q9UK53 422 aaPredicted RBP10.11□□□□□ -0.79
CLPX-204ENST00000559152 FOXJ3Q9UPW0 622 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 DHDHQ9UQ10 334 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 HDGFL3Q9Y3E1 203 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 R4GMQ9 66 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 B4E171 279 aa10.11□□□□□ -0.79
CLPX-204ENST00000559152 ZNF28P17035 718 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms