RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 ADGRL4Q9HBW9 690 aa15.94■□□□□ 0.14
CLPX-203ENST00000558958 UPB1Q9UBR1 384 aa15.94■□□□□ 0.14
CLPX-203ENST00000558958 PRSS50Q9UI38 385 aa15.94■□□□□ 0.14
CLPX-203ENST00000558958 EXOGQ9Y2C4 368 aaKnown RBP15.94■□□□□ 0.14
CLPX-203ENST00000558958 FREM1Q5H8C1 2179 aa15.94■□□□□ 0.14
CLPX-203ENST00000558958 A0A0G2JNJ9 132 aa15.93■□□□□ 0.14
CLPX-203ENST00000558958 TVP23AA6NH52 213 aa15.93■□□□□ 0.14
CLPX-203ENST00000558958 APOL3O95236 402 aa15.93■□□□□ 0.14
CLPX-203ENST00000558958 TFP02787 698 aa15.93■□□□□ 0.14
CLPX-203ENST00000558958 LYNP07948 512 aa15.93■□□□□ 0.14
CLPX-203ENST00000558958 GAAP10253 952 aa15.93■□□□□ 0.14
CLPX-203ENST00000558958 ZNF84P51523 738 aa15.93■□□□□ 0.14
CLPX-203ENST00000558958 TLE1Q04724 770 aa15.93■□□□□ 0.14
CLPX-203ENST00000558958 ST3GAL4Q11206 333 aa15.93■□□□□ 0.14
CLPX-203ENST00000558958 STK11Q15831 433 aa15.93■□□□□ 0.14
CLPX-203ENST00000558958 CEACAM16Q2WEN9 425 aa15.93■□□□□ 0.14
CLPX-203ENST00000558958 TMEM211Q6ICI0 200 aa15.93■□□□□ 0.14
CLPX-203ENST00000558958 FOXL2NBQ6ZUU3 175 aa15.93■□□□□ 0.14
CLPX-203ENST00000558958 UBE2J2Q8N2K1 259 aa15.93■□□□□ 0.14
CLPX-203ENST00000558958 GALNT11Q8NCW6 608 aa15.93■□□□□ 0.14
CLPX-203ENST00000558958 OR4F15Q8NGB8 312 aa15.93■□□□□ 0.14
CLPX-203ENST00000558958 CNN2Q99439 309 aaKnown RBP15.93■□□□□ 0.14
CLPX-203ENST00000558958 COPS4Q9BT78 406 aa15.93■□□□□ 0.14
CLPX-203ENST00000558958 MRPL22Q9NWU5 206 aaKnown RBP15.93■□□□□ 0.14
CLPX-203ENST00000558958 Q9UFV3 132 aa15.93■□□□□ 0.14
CLPX-203ENST00000558958 NBASA2RRP1 2371 aa15.93■□□□□ 0.14
CLPX-203ENST00000558958 A0A1W2PPL8 197 aa15.92■□□□□ 0.14
CLPX-203ENST00000558958 IRGMA1A4Y4 181 aa15.92■□□□□ 0.14
CLPX-203ENST00000558958 HSPB2A8KAH6 182 aa15.92■□□□□ 0.14
CLPX-203ENST00000558958 B8ZZF3 427 aa15.92■□□□□ 0.14
CLPX-203ENST00000558958 ZNF587BE7ETH6 402 aa15.92■□□□□ 0.14
CLPX-203ENST00000558958 J3QRE1 110 aa15.92■□□□□ 0.14
CLPX-203ENST00000558958 MPZL1O95297 269 aa15.92■□□□□ 0.14
CLPX-203ENST00000558958 CNOT4O95628 575 aaKnown RBP15.92■□□□□ 0.14
CLPX-203ENST00000558958 HLA-DQA2P01906 255 aa15.92■□□□□ 0.14
CLPX-203ENST00000558958 HRGP04196 525 aa15.92■□□□□ 0.14
CLPX-203ENST00000558958 PRB1P04280 392 aa15.92■□□□□ 0.14
CLPX-203ENST00000558958 RPSAP08865 295 aaKnown RBP15.92■□□□□ 0.14
CLPX-203ENST00000558958 MRPL3P09001 348 aaKnown RBP15.92■□□□□ 0.14
CLPX-203ENST00000558958 SBK2P0C263 348 aa15.92■□□□□ 0.14
CLPX-203ENST00000558958 EEF1B2P24534 225 aaKnown RBP15.92■□□□□ 0.14
CLPX-203ENST00000558958 CDAP32320 146 aa15.92■□□□□ 0.14
CLPX-203ENST00000558958 ATP6V1E1P36543 226 aa15.92■□□□□ 0.14
CLPX-203ENST00000558958 FAPQ12884 760 aa15.92■□□□□ 0.14
CLPX-203ENST00000558958 HSPB2Q16082 182 aa15.92■□□□□ 0.14
CLPX-203ENST00000558958 NCCRP1Q6ZVX7 275 aaPredicted RBP15.92■□□□□ 0.14
CLPX-203ENST00000558958 SHFQ7M4L6 423 aa15.92■□□□□ 0.14
CLPX-203ENST00000558958 TIGD4Q8IY51 512 aa15.92■□□□□ 0.14
CLPX-203ENST00000558958 OR52I1Q8NGK6 324 aa15.92■□□□□ 0.14
CLPX-203ENST00000558958 MYDGFQ969H8 173 aa15.92■□□□□ 0.14
CLPX-203ENST00000558958 WDR76Q9H967 626 aa15.92■□□□□ 0.14
CLPX-203ENST00000558958 FGF20Q9NP95 211 aaPredicted RBP15.92■□□□□ 0.14
CLPX-203ENST00000558958 CCNB1IP1Q9NPC3 277 aa15.92■□□□□ 0.14
CLPX-203ENST00000558958 ERVK-18Q9QC07 812 aa15.92■□□□□ 0.14
CLPX-203ENST00000558958 PROCRQ9UNN8 238 aa15.92■□□□□ 0.14
CLPX-203ENST00000558958 COMMD3-BMI1R4GMX3 469 aa15.92■□□□□ 0.14
CLPX-203ENST00000558958 SELENOFO60613 162 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 FADS2O95864 444 aaKnown RBP15.91■□□□□ 0.14
CLPX-203ENST00000558958 IL18BPO95998 194 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 SCG5P05408 212 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 CDK1P06493 297 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 CD8BP10966 210 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 NAA10P41227 235 aaPredicted RBP15.91■□□□□ 0.14
CLPX-203ENST00000558958 MVKQ03426 396 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 PIGFQ07326 219 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 SLC16A9Q7RTY1 509 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 ABHD12BQ7Z5M8 362 aaPredicted RBP15.91■□□□□ 0.14
CLPX-203ENST00000558958 ZNF843Q8N446 348 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 STX19Q8N4C7 294 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 C11orf40Q8WZ69 217 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 TMEM80Q96HE8 168 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 SIGLEC11Q96RL6 698 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 INTS14Q96SY0 518 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 SEC61A2Q9H9S3 476 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 ZNF629Q9UEG4 869 aaPredicted RBP15.91■□□□□ 0.14
CLPX-203ENST00000558958 INTS1Q8N201 2190 aaKnown RBP15.91■□□□□ 0.14
CLPX-203ENST00000558958 MAGEA13PA6NCF6 341 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 HTR1AP08908 422 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 ADRA2AP08913 450 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 DCKP27707 260 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 C21orf33P30042 268 aaPredicted RBP15.91■□□□□ 0.14
CLPX-203ENST00000558958 OPRM1P35372 400 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 GUCA1AP43080 201 aaPredicted RBP15.91■□□□□ 0.14
CLPX-203ENST00000558958 CDH15P55291 814 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 FOXG1P55316 489 aaPredicted RBP15.91■□□□□ 0.14
CLPX-203ENST00000558958 MRPS34P82930 218 aaKnown RBP15.91■□□□□ 0.14
CLPX-203ENST00000558958 IGFBP7Q16270 282 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 KCNMB1Q16558 191 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 MEP1BQ16820 701 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 SOWAHCQ53LP3 525 aaPredicted RBP15.91■□□□□ 0.14
CLPX-203ENST00000558958 OTPQ5XKR4 325 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 Q6ZT83 130 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 ERI1Q8IV48 349 aaKnown RBP15.91■□□□□ 0.14
CLPX-203ENST00000558958 RND1Q92730 232 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 NABP1Q96AH0 204 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 FOXB1Q99853 325 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 POLE4Q9NR33 117 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 TMEM38BQ9NVV0 291 aa15.91■□□□□ 0.14
CLPX-203ENST00000558958 DIMT1Q9UNQ2 313 aaKnown RBP15.91■□□□□ 0.14
CLPX-203ENST00000558958 PCDHGB1Q9Y5G3 927 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms