RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 B3GAT2Q9NPZ5 323 aa10.91□□□□□ -0.66
RABGGTA-207ENST00000558936 CA10Q9NS85 328 aa10.91□□□□□ -0.66
RABGGTA-207ENST00000558936 POU2F3Q9UKI9 436 aa10.91□□□□□ -0.66
RABGGTA-207ENST00000558936 IER3IP1Q9Y5U9 82 aa10.91□□□□□ -0.66
RABGGTA-207ENST00000558936 ATP23Q9Y6H3 246 aa10.91□□□□□ -0.66
RABGGTA-207ENST00000558936 U3KQV3 271 aa10.91□□□□□ -0.66
RABGGTA-207ENST00000558936 MTORP42345 2549 aa10.91□□□□□ -0.66
RABGGTA-207ENST00000558936 BHLHE40O14503 412 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 PPP1R3DO95685 299 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 CD79AP11912 226 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 ZNF32P17041 273 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 FPR3P25089 353 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 LAP3P28838 519 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 IFNA8P32881 189 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 ARR3P36575 388 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 RBMXP38159 391 aaKnown RBP10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 WNT5AP41221 380 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 PTDSS1P48651 473 aaKnown RBP10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 DAP3P51398 398 aaKnown RBP10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 ATP5J2P56134 94 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 PSG4Q00888 419 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 TRAP1Q12931 704 aaKnown RBP10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 HNRNPA0Q13151 305 aaKnown RBP10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 GSG1Q2KHT4 349 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 RSPO1Q2MKA7 263 aaPredicted RBP10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 ANKDD1AQ495B1 522 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 AGAP6Q5VW22 663 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 ZNF620Q6ZNG0 422 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 CYP4Z1Q86W10 505 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 CCDC36Q8IYA8 594 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 DEPDC4Q8N2C3 294 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 MUC15Q8N387 334 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 PAPD5Q8NDF8 572 aaKnown RBP10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 OR4Q3Q8NH05 313 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 NANOS1Q8WY41 292 aaKnown RBP10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 Q96MF0 132 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 DOK1Q99704 481 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 NIPSNAP1Q9BPW8 284 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 ALG12Q9BV10 488 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 CHID1Q9BWS9 393 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 CACNG6Q9BXT2 260 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 TRIM15Q9C019 465 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 WNT5BQ9H1J7 359 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 EMC7Q9NPA0 242 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 CBLN4Q9NTU7 201 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 FAIMQ9NVQ4 179 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 VSX1Q9NZR4 365 aaPredicted RBP10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 REV1Q9UBZ9 1251 aa10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 FAM32AQ9Y421 112 aaKnown RBP10.9□□□□□ -0.66
RABGGTA-207ENST00000558936 CSPG4Q6UVK1 2322 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 IGLV1-36A0A0B4J1U3 117 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 PRSS37A4D1T9 235 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 OR6C68A6NDL8 312 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 SOCS2O14508 198 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 DNAJC8O75937 253 aaPredicted RBP10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 NDUFB2O95178 105 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 SERPINA5P05154 406 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 OR8G3PP0DMU2 310 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 HIST1H1CP16403 213 aaKnown RBP10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 NR4A1P22736 598 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 APOBEC3AP31941 199 aaPredicted RBP10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 FABP6P51161 128 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 TSPAN31Q12999 210 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 TNK1Q13470 666 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 TAF11Q15544 211 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 NRN1LQ496H8 165 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 MTX3Q5HYI7 312 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 FAM27BQ5VT28 67 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 OR2T5Q6IEZ7 315 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 KRT80Q6KB66 452 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 ZNF544Q6NX49 715 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 SMARCD3Q6STE5 483 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 LYPD4Q6UWN0 246 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 ASRGL1Q7L266 308 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 OR6V1Q8N148 313 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 NUP37Q8NFH4 326 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 OR2T29Q8NH02 315 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 AKR7LQ8NHP1 331 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 C18orf12Q96KH6 178 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 ZNF416Q9BWM5 594 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 NUAK2Q9H093 628 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 SYT4Q9H2B2 425 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 MUC13Q9H3R2 512 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 FN3KQ9H479 309 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 SIAEQ9HAT2 523 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 SMURF2Q9HAU4 748 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 TMEM5Q9Y2B1 443 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 ABCA2Q9BZC7 2435 aa10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 FN1P02751 2386 aaKnown RBP10.89□□□□□ -0.67
RABGGTA-207ENST00000558936 AQP12BA6NM10 295 aa10.88□□□□□ -0.67
RABGGTA-207ENST00000558936 TNFRSF11BO00300 401 aa10.88□□□□□ -0.67
RABGGTA-207ENST00000558936 GYG2O15488 501 aa10.88□□□□□ -0.67
RABGGTA-207ENST00000558936 OR10H3O60404 316 aa10.88□□□□□ -0.67
RABGGTA-207ENST00000558936 CRYAAP02489 173 aa10.88□□□□□ -0.67
RABGGTA-207ENST00000558936 OR4A8P0C604 315 aa10.88□□□□□ -0.67
RABGGTA-207ENST00000558936 GAAP10253 952 aa10.88□□□□□ -0.67
RABGGTA-207ENST00000558936 ITGA2P17301 1181 aa10.88□□□□□ -0.67
RABGGTA-207ENST00000558936 APEX1P27695 318 aaKnown RBP10.88□□□□□ -0.67
RABGGTA-207ENST00000558936 SDHAP31040 664 aa10.88□□□□□ -0.67
RABGGTA-207ENST00000558936 CAPZA2P47755 286 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms