RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 SLC1A3P43003 542 aa13.93□□□□□ -0.18
CDC42BPB-203ENST00000558867 RPL5P46777 297 aaKnown RBP13.93□□□□□ -0.18
CDC42BPB-203ENST00000558867 PPOXP50336 477 aa13.93□□□□□ -0.18
CDC42BPB-203ENST00000558867 IDH3GP51553 393 aaPredicted RBP13.93□□□□□ -0.18
CDC42BPB-203ENST00000558867 MAP2K6P52564 334 aa13.93□□□□□ -0.18
CDC42BPB-203ENST00000558867 UGT2B15P54855 530 aa13.93□□□□□ -0.18
CDC42BPB-203ENST00000558867 TAS2R41P59536 307 aa13.93□□□□□ -0.18
CDC42BPB-203ENST00000558867 CD47Q08722 323 aa13.93□□□□□ -0.18
CDC42BPB-203ENST00000558867 SEC23BQ15437 767 aa13.93□□□□□ -0.18
CDC42BPB-203ENST00000558867 ENTPD8Q5MY95 495 aa13.93□□□□□ -0.18
CDC42BPB-203ENST00000558867 C6orf141Q5SZD1 244 aa13.93□□□□□ -0.18
CDC42BPB-203ENST00000558867 PGBD2Q6P3X8 592 aa13.93□□□□□ -0.18
CDC42BPB-203ENST00000558867 AQP11Q8NBQ7 271 aa13.93□□□□□ -0.18
CDC42BPB-203ENST00000558867 OR9Q2Q8NGE9 314 aa13.93□□□□□ -0.18
CDC42BPB-203ENST00000558867 NEU4Q8WWR8 484 aaPredicted RBP13.93□□□□□ -0.18
CDC42BPB-203ENST00000558867 ARL5BQ96KC2 179 aa13.93□□□□□ -0.18
CDC42BPB-203ENST00000558867 SLC38A2Q96QD8 506 aa13.93□□□□□ -0.18
CDC42BPB-203ENST00000558867 MCHR1Q99705 422 aa13.93□□□□□ -0.18
CDC42BPB-203ENST00000558867 NIPSNAP1Q9BPW8 284 aa13.93□□□□□ -0.18
CDC42BPB-203ENST00000558867 KATNB1Q9BVA0 655 aa13.93□□□□□ -0.18
CDC42BPB-203ENST00000558867 FAM192AQ9GZU8 254 aa13.93□□□□□ -0.18
CDC42BPB-203ENST00000558867 OCEL1Q9H607 264 aa13.93□□□□□ -0.18
CDC42BPB-203ENST00000558867 SLC7A10Q9NS82 523 aa13.93□□□□□ -0.18
CDC42BPB-203ENST00000558867 RHCGQ9UBD6 479 aa13.93□□□□□ -0.18
CDC42BPB-203ENST00000558867 ARFGEF3Q5TH69 2177 aa13.93□□□□□ -0.18
CDC42BPB-203ENST00000558867 CENPVL1A0A0U1RR11 272 aa13.92□□□□□ -0.18
CDC42BPB-203ENST00000558867 TRAPPC13A5PLN9 417 aa13.92□□□□□ -0.18
CDC42BPB-203ENST00000558867 DPPA5A6NC42 116 aa13.92□□□□□ -0.18
CDC42BPB-203ENST00000558867 MRPS14O60783 128 aaKnown RBP13.92□□□□□ -0.18
CDC42BPB-203ENST00000558867 GASTP01350 101 aa13.92□□□□□ -0.18
CDC42BPB-203ENST00000558867 TFAP2AP05549 437 aa13.92□□□□□ -0.18
CDC42BPB-203ENST00000558867 OSMP13725 252 aa13.92□□□□□ -0.18
CDC42BPB-203ENST00000558867 GSTM3P21266 225 aa13.92□□□□□ -0.18
CDC42BPB-203ENST00000558867 APEX1P27695 318 aaKnown RBP13.92□□□□□ -0.18
CDC42BPB-203ENST00000558867 CFPP27918 469 aa13.92□□□□□ -0.18
CDC42BPB-203ENST00000558867 POLR2IP36954 125 aaKnown RBP13.92□□□□□ -0.18
CDC42BPB-203ENST00000558867 FOXG1P55316 489 aaPredicted RBP13.92□□□□□ -0.18
CDC42BPB-203ENST00000558867 UBE2NP61088 152 aaKnown RBP13.92□□□□□ -0.18
CDC42BPB-203ENST00000558867 CSNK2BP67870 215 aa13.92□□□□□ -0.18
CDC42BPB-203ENST00000558867 H3F3AP84243 136 aa13.92□□□□□ -0.18
CDC42BPB-203ENST00000558867 PLAURQ03405 335 aa13.92□□□□□ -0.18
CDC42BPB-203ENST00000558867 TSPO2Q5TGU0 170 aa13.92□□□□□ -0.18
CDC42BPB-203ENST00000558867 ZNF613Q6PF04 617 aa13.92□□□□□ -0.18
CDC42BPB-203ENST00000558867 ZNF440Q8IYI8 595 aa13.92□□□□□ -0.18
CDC42BPB-203ENST00000558867 LSMEM1Q8N8F7 131 aa13.92□□□□□ -0.18
CDC42BPB-203ENST00000558867 OR4F15Q8NGB8 312 aa13.92□□□□□ -0.18
CDC42BPB-203ENST00000558867 OR4K5Q8NGD3 323 aa13.92□□□□□ -0.18
CDC42BPB-203ENST00000558867 ACOT11Q8WXI4 607 aaPredicted RBP13.92□□□□□ -0.18
CDC42BPB-203ENST00000558867 REV1Q9UBZ9 1251 aa13.92□□□□□ -0.18
CDC42BPB-203ENST00000558867 FLVCR1Q9Y5Y0 555 aa13.92□□□□□ -0.18
CDC42BPB-203ENST00000558867 ZAR1LA6NP61 321 aa13.91□□□□□ -0.18
CDC42BPB-203ENST00000558867 ZNF208O43345 1280 aa13.91□□□□□ -0.18
CDC42BPB-203ENST00000558867 OR10H3O60404 316 aa13.91□□□□□ -0.18
CDC42BPB-203ENST00000558867 OR4A8P0C604 315 aa13.91□□□□□ -0.18
CDC42BPB-203ENST00000558867 DAOP14920 347 aa13.91□□□□□ -0.18
CDC42BPB-203ENST00000558867 CCNA2P20248 432 aa13.91□□□□□ -0.18
CDC42BPB-203ENST00000558867 FUT4P22083 530 aa13.91□□□□□ -0.18
CDC42BPB-203ENST00000558867 CRHBPP24387 322 aa13.91□□□□□ -0.18
CDC42BPB-203ENST00000558867 GIFP27352 417 aa13.91□□□□□ -0.18
CDC42BPB-203ENST00000558867 NTF4P34130 210 aa13.91□□□□□ -0.18
CDC42BPB-203ENST00000558867 CRISP1P54107 249 aa13.91□□□□□ -0.18
CDC42BPB-203ENST00000558867 CDK5R2Q13319 367 aa13.91□□□□□ -0.18
CDC42BPB-203ENST00000558867 MAD2L1BPQ15013 274 aaPredicted RBP13.91□□□□□ -0.18
CDC42BPB-203ENST00000558867 EFNB3Q15768 340 aa13.91□□□□□ -0.18
CDC42BPB-203ENST00000558867 AAED1Q7RTV5 226 aa13.91□□□□□ -0.18
CDC42BPB-203ENST00000558867 RNF113BQ8IZP6 322 aaKnown RBP13.91□□□□□ -0.18
CDC42BPB-203ENST00000558867 FAM71CQ8NEG0 241 aa13.91□□□□□ -0.18
CDC42BPB-203ENST00000558867 SGMS2Q8NHU3 365 aa13.91□□□□□ -0.18
CDC42BPB-203ENST00000558867 TMEM45BQ96B21 275 aa13.91□□□□□ -0.18
CDC42BPB-203ENST00000558867 DNAJA3Q96EY1 480 aa13.91□□□□□ -0.18
CDC42BPB-203ENST00000558867 SLC41A3Q96GZ6 507 aa13.91□□□□□ -0.18
CDC42BPB-203ENST00000558867 EXOSC3Q9NQT5 275 aaKnown RBP13.91□□□□□ -0.18
CDC42BPB-203ENST00000558867 A0A087WUU8 490 aa13.9□□□□□ -0.18
CDC42BPB-203ENST00000558867 SMIM31A0A1B0GVY4 71 aa13.9□□□□□ -0.18
CDC42BPB-203ENST00000558867 LRP5LA4QPB2 252 aa13.9□□□□□ -0.18
CDC42BPB-203ENST00000558867 OR6C65A6NJZ3 312 aa13.9□□□□□ -0.18
CDC42BPB-203ENST00000558867 CLDN24A6NM45 220 aa13.9□□□□□ -0.18
CDC42BPB-203ENST00000558867 WIPF1O43516 503 aa13.9□□□□□ -0.18
CDC42BPB-203ENST00000558867 MPZL2O60487 215 aa13.9□□□□□ -0.18
CDC42BPB-203ENST00000558867 TACSTD2P09758 323 aa13.9□□□□□ -0.18
CDC42BPB-203ENST00000558867 EPHA2P29317 976 aa13.9□□□□□ -0.18
CDC42BPB-203ENST00000558867 ALDH3B2P48448 385 aa13.9□□□□□ -0.18
CDC42BPB-203ENST00000558867 GSSP48637 474 aa13.9□□□□□ -0.18
CDC42BPB-203ENST00000558867 POLR2HP52434 150 aaKnown RBP13.9□□□□□ -0.18
CDC42BPB-203ENST00000558867 SLC17A1Q14916 467 aa13.9□□□□□ -0.18
CDC42BPB-203ENST00000558867 C3orf36Q3SXR2 165 aa13.9□□□□□ -0.18
CDC42BPB-203ENST00000558867 LAIR2Q6ISS4 152 aa13.9□□□□□ -0.18
CDC42BPB-203ENST00000558867 VHLLQ6RSH7 139 aa13.9□□□□□ -0.18
CDC42BPB-203ENST00000558867 PAQR6Q6TCH4 344 aa13.9□□□□□ -0.18
CDC42BPB-203ENST00000558867 HMGN2P46Q86SG4 172 aa13.9□□□□□ -0.18
CDC42BPB-203ENST00000558867 ADGRG3Q86Y34 549 aa13.9□□□□□ -0.18
CDC42BPB-203ENST00000558867 GNPDA2Q8TDQ7 276 aa13.9□□□□□ -0.18
CDC42BPB-203ENST00000558867 C1orf159Q96HA4 380 aa13.9□□□□□ -0.18
CDC42BPB-203ENST00000558867 BOD1Q96IK1 185 aa13.9□□□□□ -0.18
CDC42BPB-203ENST00000558867 SF3B5Q9BWJ5 86 aaKnown RBP13.9□□□□□ -0.18
CDC42BPB-203ENST00000558867 OR11A1Q9GZK7 315 aa13.9□□□□□ -0.18
CDC42BPB-203ENST00000558867 PLK3Q9H4B4 646 aa13.9□□□□□ -0.18
CDC42BPB-203ENST00000558867 KRCC1Q9NPI7 259 aaPredicted RBP13.9□□□□□ -0.18
CDC42BPB-203ENST00000558867 PLCXD1Q9NUJ7 323 aa13.9□□□□□ -0.18
CDC42BPB-203ENST00000558867 TMED7-TICAM2A0A0A6YYA0 188 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms