RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 RAB39AQ14964 217 aa13.77□□□□□ -0.21
RABGGTA-206ENST00000558649 ETFDHQ16134 617 aa13.77□□□□□ -0.21
RABGGTA-206ENST00000558649 PGGHGQ32M88 737 aa13.77□□□□□ -0.21
RABGGTA-206ENST00000558649 SLC36A2Q495M3 483 aa13.77□□□□□ -0.21
RABGGTA-206ENST00000558649 SLC35F1Q5T1Q4 408 aa13.77□□□□□ -0.21
RABGGTA-206ENST00000558649 TMEM53Q6P2H8 277 aa13.77□□□□□ -0.21
RABGGTA-206ENST00000558649 LEG1Q6P5S2 330 aa13.77□□□□□ -0.21
RABGGTA-206ENST00000558649 VHLLQ6RSH7 139 aa13.77□□□□□ -0.21
RABGGTA-206ENST00000558649 ADCK1Q86TW2 530 aa13.77□□□□□ -0.21
RABGGTA-206ENST00000558649 HS3ST5Q8IZT8 346 aa13.77□□□□□ -0.21
RABGGTA-206ENST00000558649 FAM169BQ8N8A8 192 aa13.77□□□□□ -0.21
RABGGTA-206ENST00000558649 OR4K13Q8NH42 304 aa13.77□□□□□ -0.21
RABGGTA-206ENST00000558649 NABP1Q96AH0 204 aa13.77□□□□□ -0.21
RABGGTA-206ENST00000558649 MBD6Q96DN6 1003 aa13.77□□□□□ -0.21
RABGGTA-206ENST00000558649 PERPQ96FX8 193 aa13.77□□□□□ -0.21
RABGGTA-206ENST00000558649 NIPSNAP1Q9BPW8 284 aa13.77□□□□□ -0.21
RABGGTA-206ENST00000558649 PLA2G12AQ9BZM1 189 aa13.77□□□□□ -0.21
RABGGTA-206ENST00000558649 KCNN2Q9H2S1 579 aa13.77□□□□□ -0.21
RABGGTA-206ENST00000558649 CCNB1IP1Q9NPC3 277 aa13.77□□□□□ -0.21
RABGGTA-206ENST00000558649 FAIMQ9NVQ4 179 aa13.77□□□□□ -0.21
RABGGTA-206ENST00000558649 BEX4Q9NWD9 120 aaPredicted RBP13.77□□□□□ -0.21
RABGGTA-206ENST00000558649 PDP1Q9P0J1 537 aaPredicted RBP13.77□□□□□ -0.21
RABGGTA-206ENST00000558649 DNAJB9Q9UBS3 223 aa13.77□□□□□ -0.21
RABGGTA-206ENST00000558649 AKAP6Q13023 2319 aa13.76□□□□□ -0.21
RABGGTA-206ENST00000558649 HEATR1Q9H583 2144 aaKnown RBP13.76□□□□□ -0.21
RABGGTA-206ENST00000558649 IGHV2OR16-5A0A0B4J2B6 119 aa13.76□□□□□ -0.21
RABGGTA-206ENST00000558649 SLC16A7O60669 478 aa13.76□□□□□ -0.21
RABGGTA-206ENST00000558649 HIST1H1CP16403 213 aaKnown RBP13.76□□□□□ -0.21
RABGGTA-206ENST00000558649 CTLA4P16410 223 aa13.76□□□□□ -0.21
RABGGTA-206ENST00000558649 ZNF14P17017 642 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-206ENST00000558649 NPR2P20594 1047 aa13.76□□□□□ -0.21
RABGGTA-206ENST00000558649 LAP3P28838 519 aa13.76□□□□□ -0.21
RABGGTA-206ENST00000558649 CDKN2AP42771 156 aaKnown RBP13.76□□□□□ -0.21
RABGGTA-206ENST00000558649 CENPAP49450 140 aa13.76□□□□□ -0.21
RABGGTA-206ENST00000558649 DBPQ10586 325 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-206ENST00000558649 C3orf36Q3SXR2 165 aa13.76□□□□□ -0.21
RABGGTA-206ENST00000558649 RPL13AP3Q6NVV1 102 aa13.76□□□□□ -0.21
RABGGTA-206ENST00000558649 RASSF6Q6ZTQ3 369 aa13.76□□□□□ -0.21
RABGGTA-206ENST00000558649 PAPD5Q8NDF8 572 aaKnown RBP13.76□□□□□ -0.21
RABGGTA-206ENST00000558649 SDR9C7Q8NEX9 313 aa13.76□□□□□ -0.21
RABGGTA-206ENST00000558649 OR8D4Q8NGM9 314 aa13.76□□□□□ -0.21
RABGGTA-206ENST00000558649 UTP4Q969X6 686 aaKnown RBP13.76□□□□□ -0.21
RABGGTA-206ENST00000558649 NMNAT3Q96T66 252 aa13.76□□□□□ -0.21
RABGGTA-206ENST00000558649 FEVQ99581 238 aa13.76□□□□□ -0.21
RABGGTA-206ENST00000558649 FOXC2Q99958 501 aa13.76□□□□□ -0.21
RABGGTA-206ENST00000558649 DHRS9Q9BPW9 319 aa13.76□□□□□ -0.21
RABGGTA-206ENST00000558649 DGCR6LQ9BY27 220 aa13.76□□□□□ -0.21
RABGGTA-206ENST00000558649 FN3KQ9H479 309 aa13.76□□□□□ -0.21
RABGGTA-206ENST00000558649 SIAEQ9HAT2 523 aa13.76□□□□□ -0.21
RABGGTA-206ENST00000558649 ARMC1Q9NVT9 282 aa13.76□□□□□ -0.21
RABGGTA-206ENST00000558649 TXNDC12O95881 172 aa13.75□□□□□ -0.21
RABGGTA-206ENST00000558649 RENP00797 406 aa13.75□□□□□ -0.21
RABGGTA-206ENST00000558649 DANCRP0C864 163 aa13.75□□□□□ -0.21
RABGGTA-206ENST00000558649 APEHP13798 732 aaKnown RBP13.75□□□□□ -0.21
RABGGTA-206ENST00000558649 GSTM3P21266 225 aa13.75□□□□□ -0.21
RABGGTA-206ENST00000558649 CDKN1AP38936 164 aa13.75□□□□□ -0.21
RABGGTA-206ENST00000558649 HSF2Q03933 536 aa13.75□□□□□ -0.21
RABGGTA-206ENST00000558649 GK3PQ14409 553 aa13.75□□□□□ -0.21
RABGGTA-206ENST00000558649 NRN1LQ496H8 165 aa13.75□□□□□ -0.21
RABGGTA-206ENST00000558649 OTPQ5XKR4 325 aa13.75□□□□□ -0.21
RABGGTA-206ENST00000558649 KRT80Q6KB66 452 aa13.75□□□□□ -0.21
RABGGTA-206ENST00000558649 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.75□□□□□ -0.21
RABGGTA-206ENST00000558649 FBXL14Q8N1E6 418 aa13.75□□□□□ -0.21
RABGGTA-206ENST00000558649 ZNF75AQ96N20 296 aa13.75□□□□□ -0.21
RABGGTA-206ENST00000558649 TSSK2Q96PF2 358 aa13.75□□□□□ -0.21
RABGGTA-206ENST00000558649 TSSK6Q9BXA6 273 aa13.75□□□□□ -0.21
RABGGTA-206ENST00000558649 NUAK2Q9H093 628 aa13.75□□□□□ -0.21
RABGGTA-206ENST00000558649 CXorf56Q9H5V9 222 aa13.75□□□□□ -0.21
RABGGTA-206ENST00000558649 EMC7Q9NPA0 242 aa13.75□□□□□ -0.21
RABGGTA-206ENST00000558649 VSX1Q9NZR4 365 aaPredicted RBP13.75□□□□□ -0.21
RABGGTA-206ENST00000558649 COA3Q9Y2R0 106 aaPredicted RBP13.75□□□□□ -0.21
RABGGTA-206ENST00000558649 H3BN98 237 aa13.74□□□□□ -0.21
RABGGTA-206ENST00000558649 AHCYL1O43865 530 aa13.74□□□□□ -0.21
RABGGTA-206ENST00000558649 DEAF1O75398 565 aaPredicted RBP13.74□□□□□ -0.21
RABGGTA-206ENST00000558649 GPANK1O95872 356 aa13.74□□□□□ -0.21
RABGGTA-206ENST00000558649 SCG5P05408 212 aa13.74□□□□□ -0.21
RABGGTA-206ENST00000558649 CCL2P13500 99 aa13.74□□□□□ -0.21
RABGGTA-206ENST00000558649 ZNF32P17041 273 aa13.74□□□□□ -0.21
RABGGTA-206ENST00000558649 MSR1P21757 451 aa13.74□□□□□ -0.21
RABGGTA-206ENST00000558649 PRKACGP22612 351 aa13.74□□□□□ -0.21
RABGGTA-206ENST00000558649 TTKP33981 857 aa13.74□□□□□ -0.21
RABGGTA-206ENST00000558649 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.74□□□□□ -0.21
RABGGTA-206ENST00000558649 SNTB2Q13425 540 aaKnown RBP13.74□□□□□ -0.21
RABGGTA-206ENST00000558649 AGAP6Q5VW22 663 aa13.74□□□□□ -0.21
RABGGTA-206ENST00000558649 DPPA2Q7Z7J5 298 aa13.74□□□□□ -0.21
RABGGTA-206ENST00000558649 ZNF584Q8IVC4 421 aa13.74□□□□□ -0.21
RABGGTA-206ENST00000558649 MUC15Q8N387 334 aa13.74□□□□□ -0.21
RABGGTA-206ENST00000558649 OR52E2Q8NGJ4 325 aa13.74□□□□□ -0.21
RABGGTA-206ENST00000558649 FBXO17Q96EF6 278 aa13.74□□□□□ -0.21
RABGGTA-206ENST00000558649 TRAF4Q9BUZ4 470 aaPredicted RBP13.74□□□□□ -0.21
RABGGTA-206ENST00000558649 ZNF556Q9HAH1 456 aa13.74□□□□□ -0.21
RABGGTA-206ENST00000558649 RPRD1BQ9NQG5 326 aaKnown RBP13.74□□□□□ -0.21
RABGGTA-206ENST00000558649 POLE4Q9NR33 117 aa13.74□□□□□ -0.21
RABGGTA-206ENST00000558649 CA10Q9NS85 328 aa13.74□□□□□ -0.21
RABGGTA-206ENST00000558649 IL20Q9NYY1 176 aa13.74□□□□□ -0.21
RABGGTA-206ENST00000558649 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.74□□□□□ -0.21
RABGGTA-206ENST00000558649 KIF17Q9P2E2 1029 aa13.74□□□□□ -0.21
RABGGTA-206ENST00000558649 FBXL3Q9UKT7 428 aa13.74□□□□□ -0.21
RABGGTA-206ENST00000558649 AP4S1Q9Y587 144 aa13.74□□□□□ -0.21
RABGGTA-206ENST00000558649 SPG11Q96JI7 2443 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms