RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 FTCDNL1E5RQL4 147 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 RHODO00212 210 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 NME4O00746 187 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 MRASO14807 208 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 CYTIPO60759 359 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 NDUFS7O75251 213 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 UPK3AO75631 287 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 SYNGR4O95473 234 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 LGI1O95970 557 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 AK1P00568 194 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 BGLAPP02818 100 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 YES1P07947 543 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 COX4I1P13073 169 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 POU2F1P14859 743 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 ZNF17P17021 662 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 CDH2P19022 906 aaPredicted RBP3.7□□□□□ -1.82
SPG11-211ENST00000558561 APOBEC1P41238 236 aaKnown RBP3.7□□□□□ -1.82
SPG11-211ENST00000558561 EIF1P41567 113 aaKnown RBP3.7□□□□□ -1.82
SPG11-211ENST00000558561 SLC1A3P43003 542 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 RPS5P46782 204 aaKnown RBP3.7□□□□□ -1.82
SPG11-211ENST00000558561 CRISP3P54108 245 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 NR1H2P55055 460 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 CTBP2P56545 445 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 RPS3AP61247 264 aaKnown RBP3.7□□□□□ -1.82
SPG11-211ENST00000558561 TUBA1BP68363 451 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 PSPHP78330 225 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 TAB1Q15750 504 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 PXDC1Q5TGL8 231 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 OTPQ5XKR4 325 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 C8orf82Q6P1X6 216 aaPredicted RBP3.7□□□□□ -1.82
SPG11-211ENST00000558561 TBPL2Q6SJ96 375 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 TFAP2EQ6VUC0 442 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 MSANTD1Q6ZTZ1 278 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 TUBA1AQ71U36 451 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 GRINAQ7Z429 371 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 VTCN1Q7Z7D3 282 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 KLBQ86Z14 1044 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 PEX5LQ8IYB4 626 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 GABRG1Q8N1C3 465 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 TRIML2Q8N7C3 387 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 WDR31Q8NA23 367 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 FGFBP3Q8TAT2 258 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 RNF128Q8TEB7 428 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 ST8SIA1Q92185 356 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 S100PBPQ96BU1 408 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 C14orf79Q96F83 325 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 PIK3IP1Q96FE7 263 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 GMPPAQ96IJ6 420 aaPredicted RBP3.7□□□□□ -1.82
SPG11-211ENST00000558561 MCHR1Q99705 422 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 SMR3AQ99954 134 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 PRSS27Q9BQR3 290 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 EMC6Q9BV81 110 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 SFXN3Q9BWM7 321 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 TMEM38AQ9H6F2 299 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 POLE3Q9NRF9 147 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 SLC7A10Q9NS82 523 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 ADPRHL2Q9NX46 363 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 ELOVL5Q9NYP7 299 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 TMEM181Q9P2C4 612 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 RHCGQ9UBD6 479 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 P2RX2Q9UBL9 471 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 CHRNA9Q9UGM1 479 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 SLC35A3Q9Y2D2 325 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 ZNF175Q9Y473 711 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 GMEB1Q9Y692 573 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 ITPR3Q14573 2671 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 ANKRD17O75179 2603 aaKnown RBP3.7□□□□□ -1.82
SPG11-211ENST00000558561 CHD3Q12873 2000 aaKnown RBP3.7□□□□□ -1.82
SPG11-211ENST00000558561 F8P00451 2351 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 ARFGEF3Q5TH69 2177 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 A0A0G2JK05 382 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 GMNCA6NCL1 334 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 EVPLLA8MZ36 301 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 C5orf58C9J3I9 102 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 C16orf97H3BN30 126 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 PDLIM1O00151 329 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 IMPA2O14732 288 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 FFAR1O14842 300 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 ANGPT2O15123 496 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 ATP8B1O43520 1251 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 SNX3O60493 162 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 SEC14L2O76054 403 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 DIRAS1O95057 198 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 AGR2O95994 175 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 PLGP00747 810 aaPredicted RBP3.69□□□□□ -1.82
SPG11-211ENST00000558561 PATE4P0C8F1 98 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 T-ENOLP0DO92 83 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 PNMTP11086 282 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 ETS2P15036 469 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 CD53P19397 219 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 CRYGSP22914 178 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 CXCR1P25024 350 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 GRPRP30550 384 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 SSTR2P30874 369 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 KDELR2P33947 212 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 GCKP35557 465 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 OR3A2P47893 321 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 POLR2HP52434 150 aaKnown RBP3.69□□□□□ -1.82
SPG11-211ENST00000558561 GNGT1P63211 74 aa3.69□□□□□ -1.82
SPG11-211ENST00000558561 LIPEQ05469 1076 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms