RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 CCNB1IP1Q9NPC3 277 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 STX18Q9P2W9 335 aaKnown RBP10.24□□□□□ -0.77
HERC1-202ENST00000558324 CDC42EP3Q9UKI2 254 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 KCNS2Q9ULS6 477 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 A0A1W2PPL8 197 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 NPIPB13A6NJU9 1138 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 NPIPB4C9JG80 1138 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 H7C1C5 153 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 CLPTM1O96005 669 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 TGFAP01135 160 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 PTHP01270 115 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 IFNA2P01563 188 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 HPXP02790 462 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 MMP7P09237 267 aaPredicted RBP10.23□□□□□ -0.77
HERC1-202ENST00000558324 FAM157CP0CG43 387 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 ZNF32P17041 273 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 GIFP27352 417 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 IL2RGP31785 369 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 APLNRP35414 380 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 EVX1P49640 407 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 ZNF133P52736 654 aaPredicted RBP10.23□□□□□ -0.77
HERC1-202ENST00000558324 RPL27P61353 136 aaKnown RBP10.23□□□□□ -0.77
HERC1-202ENST00000558324 LCN6P62502 163 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 ERVK-25P63136 954 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 MRPS34P82930 218 aaKnown RBP10.23□□□□□ -0.77
HERC1-202ENST00000558324 GLO1Q04760 184 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 PRKCDQ05655 676 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 CCNIQ14094 377 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 TRIP10Q15642 601 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 NRN1LQ496H8 165 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 PODNL1Q6PEZ8 512 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 HACD2Q6Y1H2 254 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 RNF148Q8N7C7 305 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 LRRC75AQ8NAA5 344 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 CPEB3Q8NE35 698 aaKnown RBP10.23□□□□□ -0.77
HERC1-202ENST00000558324 AKR7LQ8NHP1 331 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 ACOT11Q8WXI4 607 aaPredicted RBP10.23□□□□□ -0.77
HERC1-202ENST00000558324 NABP1Q96AH0 204 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 NMD3Q96D46 503 aaKnown RBP10.23□□□□□ -0.77
HERC1-202ENST00000558324 TSPAN32Q96QS1 320 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 LRMDAQ9H2I8 198 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 MS4A5Q9H3V2 200 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 C1orf198Q9H425 327 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 NARFLQ9H6Q4 476 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 SIAEQ9HAT2 523 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 SMURF2Q9HAU4 748 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 ADA2Q9NZK5 511 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 TAAR3PQ9P1P4 343 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 EGFL7Q9UHF1 273 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 ZNF346Q9UL40 294 aaKnown RBP10.23□□□□□ -0.77
HERC1-202ENST00000558324 V9GYQ6 96 aa10.23□□□□□ -0.77
HERC1-202ENST00000558324 A0A087WUU8 490 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 SLC22A23A1A5C7 686 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 NDUFAB1O14561 156 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 CDC42EP2O14613 210 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 NCR1O76036 304 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 PRSS23O95084 383 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 SNAP29O95721 258 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 IGHMP01871 453 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 NR2C1P13056 603 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 STOMP27105 288 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 LAP3P28838 519 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 RPL4P36578 427 aaKnown RBP10.22□□□□□ -0.77
HERC1-202ENST00000558324 SLC9A3P48764 834 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 CHN2P52757 468 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 KLF3P57682 345 aaPredicted RBP10.22□□□□□ -0.77
HERC1-202ENST00000558324 TAF11Q15544 211 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 FGD3Q5JSP0 725 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 ELFN2Q5R3F8 820 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 SPATA46Q5T0L3 261 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 SLC25A47Q6Q0C1 308 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 MBOAT2Q6ZWT7 520 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 CXXC5Q7LFL8 322 aaKnown RBP10.22□□□□□ -0.77
HERC1-202ENST00000558324 RRM2BQ7LG56 351 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 CYP4Z1Q86W10 505 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 FAM156AQ8NDB6 213 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 OR1J2Q8NGS2 313 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 OR1J1Q8NGS3 322 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 ZNF519Q8TB69 540 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 SYNPRQ8TBG9 265 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 CMTM5Q96DZ9 223 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 FAM46AQ96IP4 442 aaKnown RBP10.22□□□□□ -0.77
HERC1-202ENST00000558324 RBP7Q96R05 134 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 ALG12Q9BV10 488 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 NSRP1Q9H0G5 558 aaKnown RBP10.22□□□□□ -0.77
HERC1-202ENST00000558324 MYLK2Q9H1R3 596 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 ABCD2Q9UBJ2 740 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 LPAR3Q9UBY5 353 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 RPS6KA6Q9UK32 745 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 ADAM18Q9Y3Q7 739 aa10.22□□□□□ -0.77
HERC1-202ENST00000558324 CUBNO60494 3623 aa10.21□□□□□ -0.77
HERC1-202ENST00000558324 C5orf49A4QMS7 147 aa10.21□□□□□ -0.77
HERC1-202ENST00000558324 HTR3EA5X5Y0 456 aa10.21□□□□□ -0.77
HERC1-202ENST00000558324 GMNCA6NCL1 334 aa10.21□□□□□ -0.77
HERC1-202ENST00000558324 A6NIZ1 184 aa10.21□□□□□ -0.77
HERC1-202ENST00000558324 RNF212BA8MTL3 300 aa10.21□□□□□ -0.77
HERC1-202ENST00000558324 MGRN1O60291 552 aa10.21□□□□□ -0.77
HERC1-202ENST00000558324 LILRA1O75019 489 aa10.21□□□□□ -0.77
HERC1-202ENST00000558324 DIRAS1O95057 198 aa10.21□□□□□ -0.77
HERC1-202ENST00000558324 TACSTD2P09758 323 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms