RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 IFI30P13284 250 aa13.29□□□□□ -0.28
TPM1-211ENST00000558314 RBM34P42696 430 aaKnown RBP13.29□□□□□ -0.28
TPM1-211ENST00000558314 UCP2P55851 309 aa13.29□□□□□ -0.28
TPM1-211ENST00000558314 KLF10Q13118 480 aa13.29□□□□□ -0.28
TPM1-211ENST00000558314 CYBRD1Q53TN4 286 aa13.29□□□□□ -0.28
TPM1-211ENST00000558314 METTL21CQ5VZV1 264 aa13.29□□□□□ -0.28
TPM1-211ENST00000558314 FAHD2BQ6P2I3 314 aaPredicted RBP13.29□□□□□ -0.28
TPM1-211ENST00000558314 ERICH5Q6P6B1 374 aa13.29□□□□□ -0.28
TPM1-211ENST00000558314 DPPA2Q7Z7J5 298 aa13.29□□□□□ -0.28
TPM1-211ENST00000558314 OR8J3Q8NGG0 315 aa13.29□□□□□ -0.28
TPM1-211ENST00000558314 AKR7LQ8NHP1 331 aa13.29□□□□□ -0.28
TPM1-211ENST00000558314 ZNF519Q8TB69 540 aa13.29□□□□□ -0.28
TPM1-211ENST00000558314 C10orf82Q8WW14 230 aa13.29□□□□□ -0.28
TPM1-211ENST00000558314 TMEM186Q96B77 213 aa13.29□□□□□ -0.28
TPM1-211ENST00000558314 FAHD2AQ96GK7 314 aa13.29□□□□□ -0.28
TPM1-211ENST00000558314 LRRC37BQ96QE4 947 aa13.29□□□□□ -0.28
TPM1-211ENST00000558314 FGFR1OP2Q9NVK5 253 aa13.29□□□□□ -0.28
TPM1-211ENST00000558314 SLCO1C1Q9NYB5 712 aa13.29□□□□□ -0.28
TPM1-211ENST00000558314 RHCGQ9UBD6 479 aa13.29□□□□□ -0.28
TPM1-211ENST00000558314 GRIP1Q9Y3R0 1128 aa13.29□□□□□ -0.28
TPM1-211ENST00000558314 C5orf49A4QMS7 147 aa13.28□□□□□ -0.28
TPM1-211ENST00000558314 FXYD1O00168 92 aa13.28□□□□□ -0.28
TPM1-211ENST00000558314 SPRY3O43610 288 aa13.28□□□□□ -0.28
TPM1-211ENST00000558314 MT-ND5P03915 603 aa13.28□□□□□ -0.28
TPM1-211ENST00000558314 MSMBP08118 114 aa13.28□□□□□ -0.28
TPM1-211ENST00000558314 GAAP10253 952 aa13.28□□□□□ -0.28
TPM1-211ENST00000558314 ZNF32P17041 273 aa13.28□□□□□ -0.28
TPM1-211ENST00000558314 GCH1P30793 250 aa13.28□□□□□ -0.28
TPM1-211ENST00000558314 TMEM33P57088 247 aa13.28□□□□□ -0.28
TPM1-211ENST00000558314 ERVK-25P63136 954 aa13.28□□□□□ -0.28
TPM1-211ENST00000558314 MAPRE2Q15555 327 aa13.28□□□□□ -0.28
TPM1-211ENST00000558314 ALG10Q5BKT4 473 aa13.28□□□□□ -0.28
TPM1-211ENST00000558314 CALHM3Q86XJ0 350 aa13.28□□□□□ -0.28
TPM1-211ENST00000558314 RFLNBQ8N5W9 214 aa13.28□□□□□ -0.28
TPM1-211ENST00000558314 CLDN22Q8N7P3 220 aa13.28□□□□□ -0.28
TPM1-211ENST00000558314 OR51F2Q8NH61 342 aa13.28□□□□□ -0.28
TPM1-211ENST00000558314 HDAC2Q92769 488 aaKnown RBP13.28□□□□□ -0.28
TPM1-211ENST00000558314 ZNF583Q96ND8 569 aa13.28□□□□□ -0.28
TPM1-211ENST00000558314 MRPL13Q9BYD1 178 aaKnown RBP13.28□□□□□ -0.28
TPM1-211ENST00000558314 BCL2L14Q9BZR8 327 aa13.28□□□□□ -0.28
TPM1-211ENST00000558314 GID8Q9NWU2 228 aa13.28□□□□□ -0.28
TPM1-211ENST00000558314 EIF3KQ9UBQ5 218 aaKnown RBP13.28□□□□□ -0.28
TPM1-211ENST00000558314 IGKV1D-43A0A0B4J1Z2 117 aa13.27□□□□□ -0.29
TPM1-211ENST00000558314 A0A1W2PPL8 197 aa13.27□□□□□ -0.29
TPM1-211ENST00000558314 TFP02787 698 aa13.27□□□□□ -0.29
TPM1-211ENST00000558314 STOMP27105 288 aa13.27□□□□□ -0.29
TPM1-211ENST00000558314 IFNA8P32881 189 aa13.27□□□□□ -0.29
TPM1-211ENST00000558314 GDI2P50395 445 aaKnown RBP13.27□□□□□ -0.29
TPM1-211ENST00000558314 HIST3H3Q16695 136 aa13.27□□□□□ -0.29
TPM1-211ENST00000558314 THEM4Q5T1C6 240 aa13.27□□□□□ -0.29
TPM1-211ENST00000558314 USP51Q70EK9 711 aa13.27□□□□□ -0.29
TPM1-211ENST00000558314 PCYOX1LQ8NBM8 494 aa13.27□□□□□ -0.29
TPM1-211ENST00000558314 CPEB3Q8NE35 698 aaKnown RBP13.27□□□□□ -0.29
TPM1-211ENST00000558314 OR2T12Q8NG77 320 aa13.27□□□□□ -0.29
TPM1-211ENST00000558314 OR51A7Q8NH64 312 aa13.27□□□□□ -0.29
TPM1-211ENST00000558314 VIPAS39Q9H9C1 493 aa13.27□□□□□ -0.29
TPM1-211ENST00000558314 SIAEQ9HAT2 523 aa13.27□□□□□ -0.29
TPM1-211ENST00000558314 GMPR2Q9P2T1 348 aaKnown RBP13.27□□□□□ -0.29
TPM1-211ENST00000558314 STX18Q9P2W9 335 aaKnown RBP13.27□□□□□ -0.29
TPM1-211ENST00000558314 CACNG2Q9Y698 323 aa13.27□□□□□ -0.29
TPM1-211ENST00000558314 TRAV27A0A087WT01 109 aa13.26□□□□□ -0.29
TPM1-211ENST00000558314 IGHV1-69-2A0A0G2JMI3 117 aa13.26□□□□□ -0.29
TPM1-211ENST00000558314 BBIP1A8MTZ0 92 aa13.26□□□□□ -0.29
TPM1-211ENST00000558314 GSTA4O15217 222 aa13.26□□□□□ -0.29
TPM1-211ENST00000558314 RP2O75695 350 aa13.26□□□□□ -0.29
TPM1-211ENST00000558314 ZNF682O95780 498 aa13.26□□□□□ -0.29
TPM1-211ENST00000558314 MMP7P09237 267 aaPredicted RBP13.26□□□□□ -0.29
TPM1-211ENST00000558314 ZNF250P15622 560 aa13.26□□□□□ -0.29
TPM1-211ENST00000558314 KDELR2P33947 212 aa13.26□□□□□ -0.29
TPM1-211ENST00000558314 MPV17P39210 176 aa13.26□□□□□ -0.29
TPM1-211ENST00000558314 GUCA1AP43080 201 aaPredicted RBP13.26□□□□□ -0.29
TPM1-211ENST00000558314 ZNF81P51508 661 aa13.26□□□□□ -0.29
TPM1-211ENST00000558314 CTXN1P60606 82 aa13.26□□□□□ -0.29
TPM1-211ENST00000558314 MRPS34P82930 218 aaKnown RBP13.26□□□□□ -0.29
TPM1-211ENST00000558314 MOGQ16653 247 aa13.26□□□□□ -0.29
TPM1-211ENST00000558314 PCGF3Q3KNV8 242 aa13.26□□□□□ -0.29
TPM1-211ENST00000558314 ZNF718Q3SXZ3 478 aa13.26□□□□□ -0.29
TPM1-211ENST00000558314 ARMC4Q5T2S8 1044 aa13.26□□□□□ -0.29
TPM1-211ENST00000558314 POU5F2Q8N7G0 328 aa13.26□□□□□ -0.29
TPM1-211ENST00000558314 ABHD4Q8TB40 342 aa13.26□□□□□ -0.29
TPM1-211ENST00000558314 RCN3Q96D15 328 aa13.26□□□□□ -0.29
TPM1-211ENST00000558314 BPIFA2Q96DR5 249 aa13.26□□□□□ -0.29
TPM1-211ENST00000558314 RBP7Q96R05 134 aa13.26□□□□□ -0.29
TPM1-211ENST00000558314 POLR2J2Q9GZM3 115 aaKnown RBP13.26□□□□□ -0.29
TPM1-211ENST00000558314 POLR2J3Q9H1A7 115 aaKnown RBP13.26□□□□□ -0.29
TPM1-211ENST00000558314 TXNIPQ9H3M7 391 aa13.26□□□□□ -0.29
TPM1-211ENST00000558314 SAP30LQ9HAJ7 183 aa13.26□□□□□ -0.29
TPM1-211ENST00000558314 SAR1AQ9NR31 198 aa13.26□□□□□ -0.29
TPM1-211ENST00000558314 ARMCX1Q9P291 453 aa13.26□□□□□ -0.29
TPM1-211ENST00000558314 UGT2A1Q9Y4X1 527 aa13.26□□□□□ -0.29
TPM1-211ENST00000558314 IGLV3-9A0A075B6K5 115 aa13.25□□□□□ -0.29
TPM1-211ENST00000558314 PLSCR5A0PG75 271 aa13.25□□□□□ -0.29
TPM1-211ENST00000558314 ISPDA4D126 451 aa13.25□□□□□ -0.29
TPM1-211ENST00000558314 FAM220BPB1ANY3 271 aa13.25□□□□□ -0.29
TPM1-211ENST00000558314 H7C1C5 153 aa13.25□□□□□ -0.29
TPM1-211ENST00000558314 J3KTA2 159 aa13.25□□□□□ -0.29
TPM1-211ENST00000558314 SASH3O75995 380 aa13.25□□□□□ -0.29
TPM1-211ENST00000558314 SNAP29O95721 258 aa13.25□□□□□ -0.29
TPM1-211ENST00000558314 MAKP20794 623 aa13.25□□□□□ -0.29
TPM1-211ENST00000558314 LAP3P28838 519 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms