RNA–Protein interactions for RNA: ENST00000558013.5

LDLR-207, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLR, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-207ENST00000558013 SULT1B1O43704 296 aa11.61□□□□□ -0.55
LDLR-207ENST00000558013 PRAF2O60831 178 aa11.61□□□□□ -0.55
LDLR-207ENST00000558013 IL12BP29460 328 aa11.61□□□□□ -0.55
LDLR-207ENST00000558013 FASLGP48023 281 aa11.61□□□□□ -0.55
LDLR-207ENST00000558013 OR1D5P58170 312 aa11.61□□□□□ -0.55
LDLR-207ENST00000558013 FMODQ06828 376 aa11.61□□□□□ -0.55
LDLR-207ENST00000558013 BIKQ13323 160 aa11.61□□□□□ -0.55
LDLR-207ENST00000558013 SERTAD2Q14140 314 aa11.61□□□□□ -0.55
LDLR-207ENST00000558013 AANATQ16613 207 aa11.61□□□□□ -0.55
LDLR-207ENST00000558013 NDUFAF7Q7L592 441 aa11.61□□□□□ -0.55
LDLR-207ENST00000558013 GLRX5Q86SX6 157 aa11.61□□□□□ -0.55
LDLR-207ENST00000558013 LRRC20Q8TCA0 184 aa11.61□□□□□ -0.55
LDLR-207ENST00000558013 FAM3DQ96BQ1 224 aa11.61□□□□□ -0.55
LDLR-207ENST00000558013 OMA1Q96E52 524 aa11.61□□□□□ -0.55
LDLR-207ENST00000558013 SLC46A1Q96NT5 459 aa11.61□□□□□ -0.55
LDLR-207ENST00000558013 DMRTA2Q96SC8 542 aa11.61□□□□□ -0.55
LDLR-207ENST00000558013 GSX2Q9BZM3 304 aa11.61□□□□□ -0.55
LDLR-207ENST00000558013 PTTG3PQ9NZH4 202 aa11.61□□□□□ -0.55
LDLR-207ENST00000558013 TMEM272A0A1B0GTI8 110 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 OR2M5A3KFT3 312 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 PRSS37A4D1T9 235 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 NAP1L6A6NFF2 107 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 M0QYG6 137 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 ZNF35P13682 527 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 NFYAP23511 347 aaPredicted RBP11.6□□□□□ -0.55
LDLR-207ENST00000558013 CCR5P51681 352 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 ADAM8P78325 824 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 SLC17A1Q14916 467 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 EBPQ15125 230 aaKnown RBP11.6□□□□□ -0.55
LDLR-207ENST00000558013 SMAD2Q15796 467 aaKnown RBP11.6□□□□□ -0.55
LDLR-207ENST00000558013 CLLU1Q5K131 121 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 ARHGAP40Q5TG30 622 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 ANKRD16Q6P6B7 361 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 SLC36A1Q7Z2H8 476 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 OR1J4Q8NGS1 313 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 ZNF417Q8TAU3 575 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 DUSP19Q8WTR2 217 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 CXorf58Q96LI9 332 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 ATG5Q9H1Y0 275 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 MCRIP1C9JLW8 97 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 L7N2F9 121 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 AP2S1P53680 142 aaPredicted RBP11.6□□□□□ -0.55
LDLR-207ENST00000558013 CFHR1Q03591 330 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 LINC00346Q8IVM7 164 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 SDR16C5Q8N3Y7 309 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 PMEPA1Q969W9 287 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 CYYR1Q96J86 154 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 ZNF578Q96N58 590 aaPredicted RBP11.6□□□□□ -0.55
LDLR-207ENST00000558013 OR8B4Q96RC9 309 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 TBL1XR1Q9BZK7 514 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 RDH8Q9NYR8 311 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 TAS2R4Q9NYW5 299 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 MAB21L2Q9Y586 359 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 MRPS18BQ9Y676 258 aaKnown RBP11.6□□□□□ -0.55
LDLR-207ENST00000558013 FER1L5A0AVI2 2057 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 FXYD6-FXYD2A0A087WZ82 144 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 GOSR2O14653 212 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 SHOXO15266 292 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 SUSD5O60279 629 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 ZNF354AO60765 605 aaPredicted RBP11.6□□□□□ -0.55
LDLR-207ENST00000558013 ABCD3P28288 659 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 MOGAT2Q3SYC2 334 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 GLYATL3Q5SZD4 288 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 TMEM65Q6PI78 240 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 CORO6Q6QEF8 472 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 ADGRG3Q86Y34 549 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 OR1L3Q8NH93 324 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 ZNF587Q96SQ5 575 aaPredicted RBP11.6□□□□□ -0.55
LDLR-207ENST00000558013 LAT2Q9GZY6 243 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 FXYD6Q9H0Q3 95 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 EXOSC3Q9NQT5 275 aaKnown RBP11.6□□□□□ -0.55
LDLR-207ENST00000558013 ZNF275Q9NSD4 429 aaPredicted RBP11.6□□□□□ -0.55
LDLR-207ENST00000558013 COA3Q9Y2R0 106 aaPredicted RBP11.6□□□□□ -0.55
LDLR-207ENST00000558013 ETV7Q9Y603 341 aa11.6□□□□□ -0.55
LDLR-207ENST00000558013 IGKV1D-43A0A0B4J1Z2 117 aa11.59□□□□□ -0.55
LDLR-207ENST00000558013 FRG2CA6NGY1 282 aa11.59□□□□□ -0.55
LDLR-207ENST00000558013 SHISA8B8ZZ34 492 aa11.59□□□□□ -0.55
LDLR-207ENST00000558013 H3BMH7 237 aa11.59□□□□□ -0.55
LDLR-207ENST00000558013 SLC25A12O75746 678 aa11.59□□□□□ -0.55
LDLR-207ENST00000558013 OR2A4O95047 310 aa11.59□□□□□ -0.55
LDLR-207ENST00000558013 OR6A2O95222 327 aa11.59□□□□□ -0.55
LDLR-207ENST00000558013 LIPCP11150 499 aa11.59□□□□□ -0.55
LDLR-207ENST00000558013 FOLR1P15328 257 aa11.59□□□□□ -0.55
LDLR-207ENST00000558013 NUDT1P36639 197 aa11.59□□□□□ -0.55
LDLR-207ENST00000558013 EGR3Q06889 387 aa11.59□□□□□ -0.55
LDLR-207ENST00000558013 SPOCK1Q08629 439 aa11.59□□□□□ -0.55
LDLR-207ENST00000558013 PLCXD2Q0VAA5 305 aa11.59□□□□□ -0.55
LDLR-207ENST00000558013 C17orf107Q6ZR85 190 aa11.59□□□□□ -0.55
LDLR-207ENST00000558013 DNM1P46Q6ZS02 220 aa11.59□□□□□ -0.55
LDLR-207ENST00000558013 ZNF627Q7L945 461 aa11.59□□□□□ -0.55
LDLR-207ENST00000558013 OR2A7Q96R45 310 aa11.59□□□□□ -0.55
LDLR-207ENST00000558013 ABHD6Q9BV23 337 aa11.59□□□□□ -0.55
LDLR-207ENST00000558013 C8orf33Q9H7E9 229 aaPredicted RBP11.59□□□□□ -0.55
LDLR-207ENST00000558013 TMEM138Q9NPI0 162 aa11.59□□□□□ -0.55
LDLR-207ENST00000558013 MKL2Q9ULH7 1088 aa11.59□□□□□ -0.55
LDLR-207ENST00000558013 ATXN7L1Q9ULK2 861 aaPredicted RBP11.59□□□□□ -0.55
LDLR-207ENST00000558013 IGKV3D-11A0A0A0MRZ8 115 aa11.59□□□□□ -0.55
LDLR-207ENST00000558013 CSN2P05814 226 aa11.59□□□□□ -0.55
LDLR-207ENST00000558013 RRASP10301 218 aa11.59□□□□□ -0.55
LDLR-207ENST00000558013 ELOCQ15369 112 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms