RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 DUSP18Q8NEJ0 188 aa3□□□□□ -1.93
TDP1-217ENST00000557782 OR2A1Q8NGT9 310 aa3□□□□□ -1.93
TDP1-217ENST00000557782 OR6K2Q8NGY2 324 aa3□□□□□ -1.93
TDP1-217ENST00000557782 CCDC26Q8TAB7 109 aa3□□□□□ -1.93
TDP1-217ENST00000557782 AGAP11Q8TF27 550 aa3□□□□□ -1.93
TDP1-217ENST00000557782 RPEQ96AT9 228 aa3□□□□□ -1.93
TDP1-217ENST00000557782 PIK3IP1Q96FE7 263 aa3□□□□□ -1.93
TDP1-217ENST00000557782 MED8Q96G25 268 aa3□□□□□ -1.93
TDP1-217ENST00000557782 CENPNQ96H22 339 aaPredicted RBP3□□□□□ -1.93
TDP1-217ENST00000557782 NOL4LQ96MY1 436 aaPredicted RBP3□□□□□ -1.93
TDP1-217ENST00000557782 ZNF396Q96N95 335 aaPredicted RBP3□□□□□ -1.93
TDP1-217ENST00000557782 OR5M11Q96RB7 305 aa3□□□□□ -1.93
TDP1-217ENST00000557782 MCCC1Q96RQ3 725 aaPredicted RBP3□□□□□ -1.93
TDP1-217ENST00000557782 UTP23Q9BRU9 249 aaKnown RBP3□□□□□ -1.93
TDP1-217ENST00000557782 RNF126Q9BV68 326 aa3□□□□□ -1.93
TDP1-217ENST00000557782 CALN1Q9BXU9 219 aa3□□□□□ -1.93
TDP1-217ENST00000557782 OR51J1Q9H342 316 aa3□□□□□ -1.93
TDP1-217ENST00000557782 C1orf198Q9H425 327 aa3□□□□□ -1.93
TDP1-217ENST00000557782 MIEF1Q9NQG6 463 aa3□□□□□ -1.93
TDP1-217ENST00000557782 NECAP2Q9NVZ3 263 aa3□□□□□ -1.93
TDP1-217ENST00000557782 RBAKQ9NYW8 714 aaPredicted RBP3□□□□□ -1.93
TDP1-217ENST00000557782 SLC17A7Q9P2U7 560 aa3□□□□□ -1.93
TDP1-217ENST00000557782 CTSZQ9UBR2 303 aa3□□□□□ -1.93
TDP1-217ENST00000557782 CBY1Q9Y3M2 126 aa3□□□□□ -1.93
TDP1-217ENST00000557782 TNFRSF18Q9Y5U5 241 aa3□□□□□ -1.93
TDP1-217ENST00000557782 SBNO1A3KN83 1393 aa3□□□□□ -1.93
TDP1-217ENST00000557782 LRPPRCP42704 1394 aaKnown RBP3□□□□□ -1.93
TDP1-217ENST00000557782 NCANO14594 1321 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 GON4LQ3T8J9 2241 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 IGHV3OR16-13A0A075B7E8 117 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 A0A087X002 238 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 A0A0B4J2A0 478 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 RBMY1BA6NDE4 496 aaKnown RBP2.99□□□□□ -1.93
TDP1-217ENST00000557782 RBMY1EA6NEQ0 496 aaKnown RBP2.99□□□□□ -1.93
TDP1-217ENST00000557782 A6NIZ1 184 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 F6UB75 175 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 SMKR1H3BMG3 65 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 SAP18O00422 153 aaKnown RBP2.99□□□□□ -1.93
TDP1-217ENST00000557782 RAD51BO15315 384 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 RAD51CO43502 376 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 HCRTR1O43613 425 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 ICOSLGO75144 302 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 LDOC1O95751 146 aaPredicted RBP2.99□□□□□ -1.93
TDP1-217ENST00000557782 CATP04040 527 aaKnown RBP2.99□□□□□ -1.93
TDP1-217ENST00000557782 OR8U8P0C7N1 319 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 RBMY1DP0C7P1 496 aaKnown RBP2.99□□□□□ -1.93
TDP1-217ENST00000557782 PNMA6AP0CW24 399 aaPredicted RBP2.99□□□□□ -1.93
TDP1-217ENST00000557782 RBMY1A1P0DJD3 496 aaKnown RBP2.99□□□□□ -1.93
TDP1-217ENST00000557782 SYT1P21579 422 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 CXCR2P25025 360 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 CSNK1A1P48729 337 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 RPL34P49207 117 aaKnown RBP2.99□□□□□ -1.93
TDP1-217ENST00000557782 KLK7P49862 253 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 RORCP51449 518 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 OR2B6P58173 313 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 TAS2R60P59551 318 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 RAP1BP61224 184 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 SLC25A11Q02978 314 aaKnown RBP2.99□□□□□ -1.93
TDP1-217ENST00000557782 ACVR1Q04771 509 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 BCL2L1Q07817 233 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 CD47Q08722 323 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 DGCR6Q14129 220 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 TFDP2Q14188 446 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 GGTLC2Q14390 218 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 TGIF1Q15583 401 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 ATP6AP1Q15904 470 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 NDUFAF6Q330K2 333 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 ZBED5Q49AG3 693 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 TPTE2P1Q5T6R2 138 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 DUPD1Q68J44 220 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 RWDD4Q6NW29 188 aaKnown RBP2.99□□□□□ -1.93
TDP1-217ENST00000557782 PLEKHG7Q6ZR37 379 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 SSX6Q7RTT6 188 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 NELFCDQ8IXH7 590 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 CYB561A3Q8NBI2 242 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 OR10G3Q8NGC4 313 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 OR10R2Q8NGX6 335 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 SPATA3Q8NHX4 192 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 CHCHD10Q8WYQ3 142 aaPredicted RBP2.99□□□□□ -1.93
TDP1-217ENST00000557782 OR8D1Q8WZ84 308 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 FGF14Q92915 247 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 FBXO17Q96EF6 278 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 ZNF514Q96K75 400 aaPredicted RBP2.99□□□□□ -1.93
TDP1-217ENST00000557782 SERPINB11Q96P15 392 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 SERPINB12Q96P63 405 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 NODALQ96S42 347 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 PSMB7Q99436 277 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 FOXC2Q99958 501 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 TIMM29Q9BSF4 260 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 FGFBP2Q9BYJ0 223 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 UPF3BQ9BZI7 483 aaKnown RBP2.99□□□□□ -1.93
TDP1-217ENST00000557782 NXF3Q9H4D5 531 aaKnown RBP2.99□□□□□ -1.93
TDP1-217ENST00000557782 QPCTLQ9NXS2 382 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 CALYQ9NYX4 217 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 SHPKQ9UHJ6 478 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 CLEC2DQ9UHP7 191 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 MUTYHQ9UIF7 546 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 NXT1Q9UKK6 140 aaKnown RBP2.99□□□□□ -1.93
TDP1-217ENST00000557782 FADS3Q9Y5Q0 445 aa2.99□□□□□ -1.93
TDP1-217ENST00000557782 PUS1Q9Y606 427 aaKnown RBP eCLIP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms