RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 PVRP15151 417 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 HLA-GP17693 338 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 FSTP19883 344 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 NTSR1P30989 418 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 YPEL5P62699 121 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 FLI1Q01543 452 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-232ENST00000557487 BIKQ13323 160 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 ETFDHQ16134 617 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 MESTQ5EB52 335 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 OR5M8Q8NGP6 311 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 OR10K1Q8NGX5 313 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 DUSP19Q8WTR2 217 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 TSACCQ96A04 125 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-232ENST00000557487 ZNF587Q96SQ5 575 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-232ENST00000557487 LPAR4Q99677 370 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 UBQLN4Q9NRR5 601 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 HRASLS2Q9NWW9 162 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 COMMD9Q9P000 198 aa14.74□□□□□ -0.05
SHMT2-232ENST00000557487 MBTPS2O43462 519 aa14.73□□□□□ -0.05
SHMT2-232ENST00000557487 BCL2L11O43521 198 aa14.73□□□□□ -0.05
SHMT2-232ENST00000557487 CD74P04233 296 aa14.73□□□□□ -0.05
SHMT2-232ENST00000557487 CD2P06729 351 aa14.73□□□□□ -0.05
SHMT2-232ENST00000557487 ITGA5P08648 1049 aa14.73□□□□□ -0.05
SHMT2-232ENST00000557487 KIR3DL2P43630 455 aa14.73□□□□□ -0.05
SHMT2-232ENST00000557487 STARP49675 285 aa14.73□□□□□ -0.05
SHMT2-232ENST00000557487 EFNB2P52799 333 aa14.73□□□□□ -0.05
SHMT2-232ENST00000557487 RPL18Q07020 188 aaKnown RBP14.73□□□□□ -0.05
SHMT2-232ENST00000557487 PLA2G7Q13093 441 aa14.73□□□□□ -0.05
SHMT2-232ENST00000557487 MEF2DQ14814 521 aa14.73□□□□□ -0.05
SHMT2-232ENST00000557487 GRM7Q14831 915 aa14.73□□□□□ -0.05
SHMT2-232ENST00000557487 SLC17A1Q14916 467 aa14.73□□□□□ -0.05
SHMT2-232ENST00000557487 CCDC157Q569K6 752 aa14.73□□□□□ -0.05
SHMT2-232ENST00000557487 WDR38Q5JTN6 314 aa14.73□□□□□ -0.05
SHMT2-232ENST00000557487 LY6G6FQ5SQ64 297 aa14.73□□□□□ -0.05
SHMT2-232ENST00000557487 PTCRAQ6ISU1 281 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-232ENST00000557487 ARHGEF39Q8N4T4 335 aa14.73□□□□□ -0.05
SHMT2-232ENST00000557487 OR9A4Q8NGU2 314 aa14.73□□□□□ -0.05
SHMT2-232ENST00000557487 PTX4Q96A99 478 aa14.73□□□□□ -0.05
SHMT2-232ENST00000557487 TSPAN32Q96QS1 320 aa14.73□□□□□ -0.05
SHMT2-232ENST00000557487 MS4A7Q9GZW8 240 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-232ENST00000557487 ATG5Q9H1Y0 275 aa14.73□□□□□ -0.05
SHMT2-232ENST00000557487 PIGMQ9H3S5 423 aa14.73□□□□□ -0.05
SHMT2-232ENST00000557487 PRTFDC1Q9NRG1 225 aa14.73□□□□□ -0.05
SHMT2-232ENST00000557487 CPNE7Q9UBL6 633 aa14.73□□□□□ -0.05
SHMT2-232ENST00000557487 A0A087WV48 116 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 KIR2DS5A0A0G2JLQ3 304 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 A0A0G2JNG1 304 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.72□□□□□ -0.05
SHMT2-232ENST00000557487 KIR2DS3K7RE56 304 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 NUDT21O43809 227 aaKnown RBP14.72□□□□□ -0.05
SHMT2-232ENST00000557487 APOC3P02656 99 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 MPZP25189 248 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 UBE2IP63279 158 aaKnown RBP14.72□□□□□ -0.05
SHMT2-232ENST00000557487 GUCA2AQ02747 115 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 SKP2Q13309 424 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 KIR2DS5Q14953 304 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 TEX30Q5JUR7 227 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 ARHGAP40Q5TG30 622 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 LRFN4Q6PJG9 635 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 DPY19L4Q7Z388 723 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 STEAP2Q8NFT2 490 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 C16orf52Q8NHV5 167 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 RNF128Q8TEB7 428 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 SEH1LQ96EE3 360 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 MOGAT1Q96PD6 335 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 OR10A5Q9H207 317 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 SEMA6CQ9H3T2 930 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 TNFSF18Q9UNG2 199 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 DTX4Q9Y2E6 619 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 TVP23AA6NH52 213 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 OR5H14A6NHG9 310 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 H0YC42 278 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 DNASE2O00115 360 aaPredicted RBP14.72□□□□□ -0.05
SHMT2-232ENST00000557487 DCTN6O00399 190 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 DOK2O60496 412 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 HPGDP15428 266 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 CNR1P21554 472 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 HNRNPA2B1P22626 353 aaKnown RBP14.72□□□□□ -0.05
SHMT2-232ENST00000557487 SLC6A8P48029 635 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 ROM1Q03395 351 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 SMAD2Q15796 467 aaKnown RBP14.72□□□□□ -0.05
SHMT2-232ENST00000557487 VWA2Q5GFL6 755 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 SLC18B1Q6NT16 456 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 ZNF679Q8IYX0 411 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 OR10AC1Q8NH08 325 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 ELSPBP1Q96BH3 223 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 BMFQ96LC9 184 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 DMRTA2Q96SC8 542 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 BARX1Q9HBU1 254 aaPredicted RBP14.72□□□□□ -0.05
SHMT2-232ENST00000557487 SLC2A8Q9NY64 477 aa14.72□□□□□ -0.05
SHMT2-232ENST00000557487 RAB19A4D1S5 217 aa14.71□□□□□ -0.05
SHMT2-232ENST00000557487 K7EQS6 105 aa14.71□□□□□ -0.05
SHMT2-232ENST00000557487 KDM4BO94953 1096 aa14.71□□□□□ -0.05
SHMT2-232ENST00000557487 CYB5AP00167 134 aa14.71□□□□□ -0.05
SHMT2-232ENST00000557487 ICAM2P13598 275 aa14.71□□□□□ -0.05
SHMT2-232ENST00000557487 CCKBRP32239 447 aa14.71□□□□□ -0.05
SHMT2-232ENST00000557487 UBE2MP61081 183 aaKnown RBP14.71□□□□□ -0.05
SHMT2-232ENST00000557487 PRTGQ2VWP7 1150 aa14.71□□□□□ -0.05
SHMT2-232ENST00000557487 PHF19Q5T6S3 580 aa14.71□□□□□ -0.05
SHMT2-232ENST00000557487 YOD1Q5VVQ6 348 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms