RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 TSSK2Q96PF2 358 aa15.25■□□□□ 0.03
SHMT2-225ENST00000556798 GABARAPL1Q9H0R8 117 aa15.25■□□□□ 0.03
SHMT2-225ENST00000556798 SEC61A2Q9H9S3 476 aa15.25■□□□□ 0.03
SHMT2-225ENST00000556798 PAPOLBQ9NRJ5 636 aaKnown RBP15.25■□□□□ 0.03
SHMT2-225ENST00000556798 PLCE1Q9P212 2302 aa15.25■□□□□ 0.03
SHMT2-225ENST00000556798 IGHV1-18A0A0C4DH31 117 aa15.24■□□□□ 0.03
SHMT2-225ENST00000556798 OR6C68A6NDL8 312 aa15.24■□□□□ 0.03
SHMT2-225ENST00000556798 DCTN6O00399 190 aa15.24■□□□□ 0.03
SHMT2-225ENST00000556798 ABCD4O14678 606 aa15.24■□□□□ 0.03
SHMT2-225ENST00000556798 IDH3BO43837 385 aa15.24■□□□□ 0.03
SHMT2-225ENST00000556798 AHCYL1O43865 530 aa15.24■□□□□ 0.03
SHMT2-225ENST00000556798 SLC16A7O60669 478 aa15.24■□□□□ 0.03
SHMT2-225ENST00000556798 MITFO75030 526 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-225ENST00000556798 FARS2O95363 451 aaKnown RBP15.24■□□□□ 0.03
SHMT2-225ENST00000556798 RENP00797 406 aa15.24■□□□□ 0.03
SHMT2-225ENST00000556798 CD3EP07766 207 aa15.24■□□□□ 0.03
SHMT2-225ENST00000556798 OSMP13725 252 aa15.24■□□□□ 0.03
SHMT2-225ENST00000556798 CD40P25942 277 aa15.24■□□□□ 0.03
SHMT2-225ENST00000556798 IDH3GP51553 393 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-225ENST00000556798 NPRL3Q12980 569 aa15.24■□□□□ 0.03
SHMT2-225ENST00000556798 SGCAQ16586 387 aa15.24■□□□□ 0.03
SHMT2-225ENST00000556798 PGGHGQ32M88 737 aa15.24■□□□□ 0.03
SHMT2-225ENST00000556798 OTPQ5XKR4 325 aa15.24■□□□□ 0.03
SHMT2-225ENST00000556798 MYPOPQ86VE0 399 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-225ENST00000556798 C10orf67Q8IYJ2 551 aa15.24■□□□□ 0.03
SHMT2-225ENST00000556798 CYB561A3Q8NBI2 242 aa15.24■□□□□ 0.03
SHMT2-225ENST00000556798 KBTBD8Q8NFY9 601 aa15.24■□□□□ 0.03
SHMT2-225ENST00000556798 NANOS1Q8WY41 292 aaKnown RBP15.24■□□□□ 0.03
SHMT2-225ENST00000556798 NUAK2Q9H093 628 aa15.24■□□□□ 0.03
SHMT2-225ENST00000556798 RPRD1BQ9NQG5 326 aaKnown RBP15.24■□□□□ 0.03
SHMT2-225ENST00000556798 RNF115Q9Y4L5 304 aa15.24■□□□□ 0.03
SHMT2-225ENST00000556798 SPG11Q96JI7 2443 aa15.23■□□□□ 0.03
SHMT2-225ENST00000556798 DSCAMO60469 2012 aa15.23■□□□□ 0.03
SHMT2-225ENST00000556798 GPANK1O95872 356 aa15.23■□□□□ 0.03
SHMT2-225ENST00000556798 GIPRP48546 466 aa15.23■□□□□ 0.03
SHMT2-225ENST00000556798 PTDSS1P48651 473 aaKnown RBP15.23■□□□□ 0.03
SHMT2-225ENST00000556798 MRPS34P82930 218 aaKnown RBP15.23■□□□□ 0.03
SHMT2-225ENST00000556798 GINS1Q14691 196 aa15.23■□□□□ 0.03
SHMT2-225ENST00000556798 GSG1Q2KHT4 349 aa15.23■□□□□ 0.03
SHMT2-225ENST00000556798 TMEM108Q6UXF1 575 aa15.23■□□□□ 0.03
SHMT2-225ENST00000556798 ZNF704Q6ZNC4 412 aaPredicted RBP15.23■□□□□ 0.03
SHMT2-225ENST00000556798 SLC16A14Q7RTX9 510 aa15.23■□□□□ 0.03
SHMT2-225ENST00000556798 CCDC36Q8IYA8 594 aa15.23■□□□□ 0.03
SHMT2-225ENST00000556798 PIAS4Q8N2W9 510 aaPredicted RBP15.23■□□□□ 0.03
SHMT2-225ENST00000556798 NPEPL1Q8NDH3 523 aa15.23■□□□□ 0.03
SHMT2-225ENST00000556798 NEUROG1Q92886 237 aa15.23■□□□□ 0.03
SHMT2-225ENST00000556798 STMN2Q93045 179 aa15.23■□□□□ 0.03
SHMT2-225ENST00000556798 LURAP1Q96LR2 239 aa15.23■□□□□ 0.03
SHMT2-225ENST00000556798 SLC38A2Q96QD8 506 aa15.23■□□□□ 0.03
SHMT2-225ENST00000556798 TMEM204Q9BSN7 226 aa15.23■□□□□ 0.03
SHMT2-225ENST00000556798 LIME1Q9H400 295 aa15.23■□□□□ 0.03
SHMT2-225ENST00000556798 KRT84Q9NSB2 600 aa15.23■□□□□ 0.03
SHMT2-225ENST00000556798 B3GNT2Q9NY97 397 aa15.23■□□□□ 0.03
SHMT2-225ENST00000556798 BAIAP2Q9UQB8 552 aa15.23■□□□□ 0.03
SHMT2-225ENST00000556798 COA3Q9Y2R0 106 aaPredicted RBP15.23■□□□□ 0.03
SHMT2-225ENST00000556798 KHDRBS3O75525 346 aaKnown RBP15.22■□□□□ 0.03
SHMT2-225ENST00000556798 UBL3O95164 117 aa15.22■□□□□ 0.03
SHMT2-225ENST00000556798 IGKV3-15P01624 115 aa15.22■□□□□ 0.03
SHMT2-225ENST00000556798 SCG5P05408 212 aa15.22■□□□□ 0.03
SHMT2-225ENST00000556798 CECR9P0C854 216 aa15.22■□□□□ 0.03
SHMT2-225ENST00000556798 CBR1P16152 277 aa15.22■□□□□ 0.03
SHMT2-225ENST00000556798 NPR2P20594 1047 aa15.22■□□□□ 0.03
SHMT2-225ENST00000556798 PTAFRP25105 342 aa15.22■□□□□ 0.03
SHMT2-225ENST00000556798 LAP3P28838 519 aa15.22■□□□□ 0.03
SHMT2-225ENST00000556798 CENPAP49450 140 aa15.22■□□□□ 0.03
SHMT2-225ENST00000556798 CRMP1Q14194 572 aa15.22■□□□□ 0.03
SHMT2-225ENST00000556798 NRN1LQ496H8 165 aa15.22■□□□□ 0.03
SHMT2-225ENST00000556798 C1QTNF12Q5T7M4 302 aa15.22■□□□□ 0.03
SHMT2-225ENST00000556798 TMEM236Q5W0B7 351 aa15.22■□□□□ 0.03
SHMT2-225ENST00000556798 ACSM5Q6NUN0 579 aa15.22■□□□□ 0.03
SHMT2-225ENST00000556798 SLC27A4Q6P1M0 643 aa15.22■□□□□ 0.03
SHMT2-225ENST00000556798 FOXL2NBQ6ZUU3 175 aa15.22■□□□□ 0.03
SHMT2-225ENST00000556798 OR6V1Q8N148 313 aa15.22■□□□□ 0.03
SHMT2-225ENST00000556798 SLC37A3Q8NCC5 494 aa15.22■□□□□ 0.03
SHMT2-225ENST00000556798 DNAJC9Q8WXX5 260 aa15.22■□□□□ 0.03
SHMT2-225ENST00000556798 SNX18Q96RF0 628 aa15.22■□□□□ 0.03
SHMT2-225ENST00000556798 PLEKHF2Q9H8W4 249 aa15.22■□□□□ 0.03
SHMT2-225ENST00000556798 UBTD1Q9HAC8 227 aa15.22■□□□□ 0.03
SHMT2-225ENST00000556798 SIAEQ9HAT2 523 aa15.22■□□□□ 0.03
SHMT2-225ENST00000556798 SRA1Q9HD15 236 aaKnown RBP15.22■□□□□ 0.03
SHMT2-225ENST00000556798 EMC7Q9NPA0 242 aa15.22■□□□□ 0.03
SHMT2-225ENST00000556798 POLE4Q9NR33 117 aa15.22■□□□□ 0.03
SHMT2-225ENST00000556798 CRNNQ9UBG3 495 aaPredicted RBP15.22■□□□□ 0.03
SHMT2-225ENST00000556798 B9D1Q9UPM9 204 aa15.22■□□□□ 0.03
SHMT2-225ENST00000556798 CSMD2Q7Z408 3487 aa15.21■□□□□ 0.03
SHMT2-225ENST00000556798 IGLV1-36A0A0B4J1U3 117 aa15.21■□□□□ 0.03
SHMT2-225ENST00000556798 FAM171A2A8MVW0 826 aa15.21■□□□□ 0.03
SHMT2-225ENST00000556798 MPZL1O95297 269 aa15.21■□□□□ 0.03
SHMT2-225ENST00000556798 RAB36O95755 333 aa15.21■□□□□ 0.03
SHMT2-225ENST00000556798 BAG2O95816 211 aa15.21■□□□□ 0.03
SHMT2-225ENST00000556798 IGLV1-44P01699 117 aa15.21■□□□□ 0.03
SHMT2-225ENST00000556798 GRK5P34947 590 aa15.21■□□□□ 0.03
SHMT2-225ENST00000556798 ARR3P36575 388 aa15.21■□□□□ 0.03
SHMT2-225ENST00000556798 RAB1AP62820 205 aa15.21■□□□□ 0.03
SHMT2-225ENST00000556798 SLC36A2Q495M3 483 aa15.21■□□□□ 0.03
SHMT2-225ENST00000556798 ZNF362Q5T0B9 420 aaPredicted RBP15.21■□□□□ 0.03
SHMT2-225ENST00000556798 KDM4DQ6B0I6 523 aa15.21■□□□□ 0.03
SHMT2-225ENST00000556798 DNM1P34Q6PK57 102 aa15.21■□□□□ 0.03
SHMT2-225ENST00000556798 UGT2A3Q6UWM9 527 aa15.21■□□□□ 0.03
SHMT2-225ENST00000556798 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms