RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 NKAIN4Q8IVV8 208 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 SYT14Q8NB59 555 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 OR1J2Q8NGS2 313 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 FNDC8Q8TC99 324 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 TMEM255BQ8WV15 326 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 NEU4Q8WWR8 484 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-222ENST00000556768 GEMIN6Q8WXD5 167 aaKnown RBP6.34□□□□□ -1.39
SCFD1-222ENST00000556768 BPIFA2Q96DR5 249 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 PRRC1Q96M27 445 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 KCTD14Q9BQ13 255 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-222ENST00000556768 FAM107BQ9H098 131 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 MRPL18Q9H0U6 180 aaKnown RBP6.34□□□□□ -1.39
SCFD1-222ENST00000556768 NELFAQ9H3P2 528 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 NOX3Q9HBY0 568 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 MEPEQ9NQ76 525 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-222ENST00000556768 YAE1D1Q9NRH1 226 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 B3GNT2Q9NY97 397 aa6.34□□□□□ -1.39
SCFD1-222ENST00000556768 CXCR6O00574 342 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 CD5LO43866 347 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 CRLF1O75462 422 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 THY1P04216 161 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 CELA3BP08861 270 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 PGA4P0DJD7 388 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 PGA3P0DJD8 388 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 TNFRSF1BP20333 461 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 NR4A1P22736 598 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 CALCRP30988 508 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 GLRXP35754 106 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 AQP2P41181 271 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 RAD52P43351 418 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 SLC7A2P52569 658 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 CRYBA2P53672 197 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 HGFACQ04756 655 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 RPL18Q07020 188 aaKnown RBP6.34□□□□□ -1.4
SCFD1-222ENST00000556768 CD47Q08722 323 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 MELKQ14680 651 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 TRAM2Q15035 370 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 MOGQ16653 247 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 MST1LQ2TV78 715 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 TMEM95Q3KNT9 176 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 IFI44LQ53G44 452 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 ALG10Q5BKT4 473 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 CYB5R2Q6BCY4 276 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 OAFQ86UD1 273 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 SLC15A3Q8IY34 581 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 RNF113BQ8IZP6 322 aaKnown RBP6.34□□□□□ -1.4
SCFD1-222ENST00000556768 SVOPLQ8N434 492 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 PFN4Q8NHR9 129 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 C10orf105Q8TEF2 133 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 LIPHQ8WWY8 451 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 TMEM54Q969K7 222 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 MCHR2Q969V1 340 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 FAM162AQ96A26 154 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 PRSS27Q9BQR3 290 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 SPAG4Q9NPE6 437 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 KRCC1Q9NPI7 259 aaPredicted RBP6.34□□□□□ -1.4
SCFD1-222ENST00000556768 TMEM38BQ9NVV0 291 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 SLC7A8Q9UHI5 535 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 DUSP13Q9UII6 198 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 RPS6KA6Q9UK32 745 aa6.34□□□□□ -1.4
SCFD1-222ENST00000556768 ATRQ13535 2644 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 SHISA3A0PJX4 238 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 NPIPB13A6NJU9 1138 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 NPIPB4C9JG80 1138 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 M0R233 179 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 SYNGR3O43761 229 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 LYPD3O95274 346 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 MT-ND5P03915 603 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 IFI30P13284 250 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 DAOP14920 347 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 ACADSP16219 412 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 ZNF14P17017 642 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-222ENST00000556768 APLNRP35414 380 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 GZMKP49863 264 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 SCAND1P57086 179 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 HSF2Q03933 536 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 GGTLC2Q14390 218 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 KRT72Q14CN4 511 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 TBC1D28Q2M2D7 210 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 TMEM249Q2WGJ8 235 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 CHRFAM7AQ494W8 412 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 THEM4Q5T1C6 240 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 FAM205BPQ63HN1 556 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 CDPF1Q6NVV7 123 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 NHLRC1Q6VVB1 395 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 HACD2Q6Y1H2 254 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 ZNF730Q6ZMV8 503 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 SKA3Q8IX90 412 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 ANKS4BQ8N8V4 417 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 RBM15BQ8NDT2 890 aaKnown RBP6.33□□□□□ -1.4
SCFD1-222ENST00000556768 SLC30A7Q8NEW0 376 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 OR4K5Q8NGD3 323 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 C11orf40Q8WZ69 217 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 SORCS2Q96PQ0 1159 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 SH3GL3Q99963 347 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 BEX2Q9BXY8 128 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 TXNIPQ9H3M7 391 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 SIAEQ9HAT2 523 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 SMURF2Q9HAU4 748 aa6.33□□□□□ -1.4
SCFD1-222ENST00000556768 CDH20Q9HBT6 801 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms