RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 MMP11P24347 488 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 RFC3P40938 356 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 PTTG1IPP53801 180 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 SUMO3P55854 103 aaPredicted RBP4.64□□□□□ -1.67
TMEM260-210ENST00000556422 ATP5J2P56134 94 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 ATP5IP56385 69 aaPredicted RBP4.64□□□□□ -1.67
TMEM260-210ENST00000556422 LSM3P62310 102 aaKnown RBP4.64□□□□□ -1.67
TMEM260-210ENST00000556422 ILKQ13418 452 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 Q5BKY6 102 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 EXOSC6Q5RKV6 272 aaKnown RBP4.64□□□□□ -1.67
TMEM260-210ENST00000556422 C12orf73Q69YU5 71 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 PODNL1Q6PEZ8 512 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF782Q6ZMW2 699 aaPredicted RBP4.64□□□□□ -1.67
TMEM260-210ENST00000556422 SYT9Q86SS6 491 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 OR4N5Q8IXE1 308 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 OR2L13Q8N349 312 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 ARHGEF39Q8N4T4 335 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 OR10G6Q8NH81 332 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 HGDQ93099 445 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 SMIM12Q96EX1 92 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 SLC35A4Q96G79 324 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 LRR1Q96L50 414 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 FYTTD1Q96QD9 318 aaKnown RBP4.64□□□□□ -1.67
TMEM260-210ENST00000556422 GEMIN7Q9H840 131 aaKnown RBP4.64□□□□□ -1.67
TMEM260-210ENST00000556422 IL21RQ9HBE5 538 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 TCF7L1Q9HCS4 588 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 NECTIN3Q9NQS3 549 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 YAE1D1Q9NRH1 226 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 RXFP3Q9NSD7 469 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 LYARQ9NX58 379 aaKnown RBP4.64□□□□□ -1.67
TMEM260-210ENST00000556422 FBXL2Q9UKC9 423 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 ADAM18Q9Y3Q7 739 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 HS3ST3A1Q9Y663 406 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 FREM2Q5SZK8 3169 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 SPTY2D1-AS1A0A0U1RR47 76 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF860A6NHJ4 632 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 CLDN24A6NM45 220 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 CYB5BO43169 146 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 SERPINA5P05154 406 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 CD2P06729 351 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 MELTFP08582 738 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 CCL2P13500 99 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 ITGA3P26006 1051 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 SRP9P49458 86 aaKnown RBP4.64□□□□□ -1.67
TMEM260-210ENST00000556422 PDX1P52945 283 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 MRPS11P82912 194 aaKnown RBP4.64□□□□□ -1.67
TMEM260-210ENST00000556422 PRR5P85299 388 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 EFNB1P98172 346 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 ST3GAL4Q11206 333 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 FZD2Q14332 565 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 FHL5Q5TD97 284 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 PRAMEF8Q5VWM4 474 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 PRAMEF7Q5VXH5 474 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 RAET1LQ5VY80 246 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 CARD17Q5XLA6 110 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 MFSD12Q6NUT3 480 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 FIGLAQ6QHK4 219 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 FRRS1Q6ZNA5 592 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 RNF44Q7L0R7 432 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 BCDIN3DQ7Z5W3 292 aaKnown RBP4.64□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF761Q86XN6 746 aaPredicted RBP4.64□□□□□ -1.67
TMEM260-210ENST00000556422 ST6GALNAC3Q8NDV1 305 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 MAFAQ8NHW3 353 aaPredicted RBP4.64□□□□□ -1.67
TMEM260-210ENST00000556422 BAHD1Q8TBE0 780 aaPredicted RBP4.64□□□□□ -1.67
TMEM260-210ENST00000556422 MOAP1Q96BY2 351 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 PEX11GQ96HA9 241 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 Q96MT0 163 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 GINS4Q9BRT9 223 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 SLIRPQ9GZT3 109 aaKnown RBP4.64□□□□□ -1.67
TMEM260-210ENST00000556422 LANCL2Q9NS86 450 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 SDK1Q7Z5N4 2213 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 MPDZO75970 2070 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 SEC16AO15027 2179 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 A0A0A6YYC8 382 aaPredicted RBP4.64□□□□□ -1.67
TMEM260-210ENST00000556422 H0YGG7 62 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 I3L1I5 382 aaPredicted RBP4.64□□□□□ -1.67
TMEM260-210ENST00000556422 SOX1O00570 391 aaPredicted RBP4.64□□□□□ -1.67
TMEM260-210ENST00000556422 SCDO00767 359 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 GALR2O43603 387 aaPredicted RBP4.64□□□□□ -1.67
TMEM260-210ENST00000556422 UGT2B17O75795 530 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 ARG1P05089 322 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF14P17017 642 aaPredicted RBP4.64□□□□□ -1.67
TMEM260-210ENST00000556422 AKT2P31751 481 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 ID1P41134 155 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 PLAURQ03405 335 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 FABP9Q0Z7S8 132 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 GAGE1Q13065 139 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 ATP6V1FQ16864 119 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 TRMT12Q53H54 448 aaKnown RBP4.64□□□□□ -1.67
TMEM260-210ENST00000556422 SOWAHCQ53LP3 525 aaPredicted RBP4.64□□□□□ -1.67
TMEM260-210ENST00000556422 TMEM201Q5SNT2 666 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 BICRALQ6AI39 1079 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 CD300LDQ6UXZ3 194 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 LRRC25Q8N386 305 aaPredicted RBP4.64□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF655Q8N720 491 aaPredicted RBP4.64□□□□□ -1.67
TMEM260-210ENST00000556422 OR4K5Q8NGD3 323 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 OR2D3Q8NGH3 330 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 ASB5Q8WWX0 329 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 DIO2Q92813 273 aa4.64□□□□□ -1.67
TMEM260-210ENST00000556422 ARHGDIGQ99819 225 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms