RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 SDHAP31040 664 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 CDKN2AP42771 156 aaKnown RBP8.39□□□□□ -1.07
SRP54-210ENST00000556380 ERFP50548 548 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 UBE2NP61088 152 aaKnown RBP8.39□□□□□ -1.07
SRP54-210ENST00000556380 FMODQ06828 376 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 SPOCK1Q08629 439 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 ZNF672Q499Z4 452 aaPredicted RBP8.39□□□□□ -1.07
SRP54-210ENST00000556380 GPR139Q6DWJ6 353 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 CD300LDQ6UXZ3 194 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 ZNF620Q6ZNG0 422 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 FOXL2NBQ6ZUU3 175 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 PTCHD4Q6ZW05 846 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 MDP1Q86V88 176 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 MYPOPQ86VE0 399 aaPredicted RBP8.39□□□□□ -1.07
SRP54-210ENST00000556380 SLC22A24Q8N4F4 322 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 ZNF611Q8N823 705 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 AQP11Q8NBQ7 271 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 KBTBD8Q8NFY9 601 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 AKAP1Q92667 903 aaKnown RBP eCLIP8.39□□□□□ -1.07
SRP54-210ENST00000556380 RADILQ96JH8 1075 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 SLC38A2Q96QD8 506 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 RBP7Q96R05 134 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 DDOQ99489 341 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 OR52D1Q9H346 318 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 SEC61A2Q9H9S3 476 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 MOV10Q9HCE1 1003 aaKnown RBP8.39□□□□□ -1.07
SRP54-210ENST00000556380 BRD7Q9NPI1 651 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 VSX1Q9NZR4 365 aaPredicted RBP8.39□□□□□ -1.07
SRP54-210ENST00000556380 GRHPRQ9UBQ7 328 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 DNAJB9Q9UBS3 223 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 MGAT4BQ9UQ53 548 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 PLEKHA6Q9Y2H5 1048 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 IER3IP1Q9Y5U9 82 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 CDH10Q9Y6N8 788 aa8.39□□□□□ -1.07
SRP54-210ENST00000556380 FLNAP21333 2647 aaKnown RBP8.39□□□□□ -1.07
SRP54-210ENST00000556380 RAI1Q7Z5J4 1906 aaPredicted RBP8.39□□□□□ -1.07
SRP54-210ENST00000556380 HEATR1Q9H583 2144 aaKnown RBP8.38□□□□□ -1.07
SRP54-210ENST00000556380 F8P00451 2351 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 TEX13CA0A0J9YWL9 993 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 ARRDC5A6NEK1 342 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 E7EQL1 145 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 ARHGEF9O43307 516 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 MGRN1O60291 552 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 PPP1R3DO95685 299 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 SCG5P05408 212 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 IGFBP1P08833 259 aaPredicted RBP8.38□□□□□ -1.07
SRP54-210ENST00000556380 MMP7P09237 267 aaPredicted RBP8.38□□□□□ -1.07
SRP54-210ENST00000556380 CECR9P0C854 216 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 DANCRP0C864 163 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 PATE4P0C8F1 98 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 OR8G3PP0DMU2 310 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 ZNF14P17017 642 aaPredicted RBP8.38□□□□□ -1.07
SRP54-210ENST00000556380 HOXC12P31275 282 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 SLC6A6P31641 620 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 ARR3P36575 388 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 MRPS34P82930 218 aaKnown RBP8.38□□□□□ -1.07
SRP54-210ENST00000556380 CD47Q08722 323 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 ZNF362Q5T0B9 420 aaPredicted RBP8.38□□□□□ -1.07
SRP54-210ENST00000556380 C1orf146Q5VVC0 180 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 B3GLCTQ6Y288 498 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 C20orf204Q6ZNR8 217 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 RASSF6Q6ZTQ3 369 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 ADCK1Q86TW2 530 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 HS3ST5Q8IZT8 346 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 OR10G2Q8NGC3 310 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 OR8D4Q8NGM9 314 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 FANK1Q8TC84 345 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 FNDC8Q8TC99 324 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 GIPC3Q8TF64 312 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 NSMAFQ92636 917 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 HTRA1Q92743 480 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 RASD2Q96D21 266 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 ZNF570Q96NI8 536 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 FEVQ99581 238 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 SH3GL3Q99963 347 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 NIPSNAP1Q9BPW8 284 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 PLA2G12AQ9BZM1 189 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 NDEL1Q9GZM8 345 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 DENND2DQ9H6A0 471 aaPredicted RBP8.38□□□□□ -1.07
SRP54-210ENST00000556380 EGLN3Q9H6Z9 239 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 YY1AP1Q9H869 796 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 UBTD1Q9HAC8 227 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 SIAEQ9HAT2 523 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 ARMC1Q9NVT9 282 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 REV1Q9UBZ9 1251 aa8.38□□□□□ -1.07
SRP54-210ENST00000556380 H7C1C5 153 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 OVOL3O00110 214 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 BHLHE40O14503 412 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 IDH3BO43837 385 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 TIPRLO75663 272 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 CD8AP01732 235 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 CD79AP11912 226 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 NR2C1P13056 603 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 CTLA4P16410 223 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 NPR2P20594 1047 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 GSTM3P21266 225 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 DNASE1P24855 282 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 CALCRP30988 508 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 CDAP32320 146 aa8.37□□□□□ -1.07
SRP54-210ENST00000556380 GIPRP48546 466 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms