RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 H7C1C5 153 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 H7C1Q1 480 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 XKRYO14609 159 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 AHCYL1O43865 530 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 OR10H3O60404 316 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 KRT36O76013 467 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 MMP7P09237 267 aaPredicted RBP9.97□□□□□ -0.81
SLIRP-206ENST00000556375 INHBBP09529 407 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 OR4A8P0C604 315 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 PATE4P0C8F1 98 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 ZNF35P13682 527 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 NR4A1P22736 598 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 SDHAP31040 664 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 CDAP32320 146 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 IFNGR2P38484 337 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 FXYD6P3P58550 94 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 LCN6P62502 163 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 MS4A2Q01362 244 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 KRR1Q13601 381 aaKnown RBP9.97□□□□□ -0.81
SLIRP-206ENST00000556375 RAB39AQ14964 217 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 CLEC12BQ2HXU8 276 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 MST1LQ2TV78 715 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 DNAL1Q4LDG9 190 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 KRT80Q6KB66 452 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 SMARCD3Q6STE5 483 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 THSD4Q6ZMP0 1018 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 DNM1P46Q6ZS02 220 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 FOXL2NBQ6ZUU3 175 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 ADCK1Q86TW2 530 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 BIVMQ86UB2 503 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 FANK1Q8TC84 345 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 NSMAFQ92636 917 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 CLPTM1LQ96KA5 538 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 GPA33Q99795 319 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 TRIM15Q9C019 465 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 RNF121Q9H920 327 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 NRIP3Q9NQ35 241 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 FBXO9Q9UK97 447 aaPredicted RBP9.97□□□□□ -0.81
SLIRP-206ENST00000556375 SPEF1Q9Y4P9 236 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 LYVE1Q9Y5Y7 322 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 PMF1-BGLAPU3KQ54 211 aa9.97□□□□□ -0.81
SLIRP-206ENST00000556375 NIPBLQ6KC79 2804 aaeCLIP9.96□□□□□ -0.81
SLIRP-206ENST00000556375 CR1P17927 2039 aa9.96□□□□□ -0.81
SLIRP-206ENST00000556375 CHD3Q12873 2000 aaKnown RBP9.96□□□□□ -0.81
SLIRP-206ENST00000556375 TEX13CA0A0J9YWL9 993 aa9.96□□□□□ -0.82
SLIRP-206ENST00000556375 SLC22A23A1A5C7 686 aa9.96□□□□□ -0.82
SLIRP-206ENST00000556375 PRSS37A4D1T9 235 aa9.96□□□□□ -0.82
SLIRP-206ENST00000556375 VSTM5A8MXK1 200 aa9.96□□□□□ -0.82
SLIRP-206ENST00000556375 STAMBPO95630 424 aa9.96□□□□□ -0.82
SLIRP-206ENST00000556375 PTHP01270 115 aa9.96□□□□□ -0.82
SLIRP-206ENST00000556375 APEHP13798 732 aaKnown RBP9.96□□□□□ -0.82
SLIRP-206ENST00000556375 THBS4P35443 961 aa9.96□□□□□ -0.82
SLIRP-206ENST00000556375 GSSP48637 474 aa9.96□□□□□ -0.82
SLIRP-206ENST00000556375 PPOXP50336 477 aa9.96□□□□□ -0.82
SLIRP-206ENST00000556375 HMGA2P52926 109 aa9.96□□□□□ -0.82
SLIRP-206ENST00000556375 NUDT6P53370 316 aa9.96□□□□□ -0.82
SLIRP-206ENST00000556375 RPS23P62266 143 aaKnown RBP9.96□□□□□ -0.82
SLIRP-206ENST00000556375 GALK2Q01415 458 aa9.96□□□□□ -0.82
SLIRP-206ENST00000556375 RAB35Q15286 201 aa9.96□□□□□ -0.82
SLIRP-206ENST00000556375 FAM98BQ52LJ0 330 aaKnown RBP9.96□□□□□ -0.82
SLIRP-206ENST00000556375 FAM27BQ5VT28 67 aa9.96□□□□□ -0.82
SLIRP-206ENST00000556375 C1orf94Q6P1W5 598 aa9.96□□□□□ -0.82
SLIRP-206ENST00000556375 PGBD2Q6P3X8 592 aa9.96□□□□□ -0.82
SLIRP-206ENST00000556375 DPY19L2P2Q6ZN68 376 aa9.96□□□□□ -0.82
SLIRP-206ENST00000556375 CIARTQ8N365 385 aaPredicted RBP9.96□□□□□ -0.82
SLIRP-206ENST00000556375 LRRC18Q8N456 261 aa9.96□□□□□ -0.82
SLIRP-206ENST00000556375 SLC30A7Q8NEW0 376 aa9.96□□□□□ -0.82
SLIRP-206ENST00000556375 RASD2Q96D21 266 aa9.96□□□□□ -0.82
SLIRP-206ENST00000556375 LRGUKQ96M69 825 aa9.96□□□□□ -0.82
SLIRP-206ENST00000556375 THTPAQ9BU02 230 aa9.96□□□□□ -0.82
SLIRP-206ENST00000556375 KCNN2Q9H2S1 579 aa9.96□□□□□ -0.82
SLIRP-206ENST00000556375 OR52D1Q9H346 318 aa9.96□□□□□ -0.82
SLIRP-206ENST00000556375 PLK3Q9H4B4 646 aa9.96□□□□□ -0.82
SLIRP-206ENST00000556375 CCNB1IP1Q9NPC3 277 aa9.96□□□□□ -0.82
SLIRP-206ENST00000556375 SLC7A8Q9UHI5 535 aa9.96□□□□□ -0.82
SLIRP-206ENST00000556375 ZFHX3Q15911 3703 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 IQCMA0A1B0GVH7 501 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 A0A1W2PPL8 197 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 FAM171A2A8MVW0 826 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 TNFRSF11BO00300 401 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 ACOT8O14734 319 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 GYG2O15488 501 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 SSX4O60224 188 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 GPRIN2O60269 458 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 SNAP29O95721 258 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 TXNDC12O95881 172 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 CST2P09228 141 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 ZNF32P17041 273 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 MSR1P21757 451 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 SLC6A6P31641 620 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 GLRXP35754 106 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 GUCA1AP43080 201 aaPredicted RBP9.95□□□□□ -0.82
SLIRP-206ENST00000556375 RPS6KA3P51812 740 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 EFNA4P52798 201 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 HSF2Q03933 536 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 PLP2Q04941 152 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 TRAP1Q12931 704 aaKnown RBP9.95□□□□□ -0.82
SLIRP-206ENST00000556375 TSPAN31Q12999 210 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 TNK1Q13470 666 aa9.95□□□□□ -0.82
SLIRP-206ENST00000556375 SGCAQ16586 387 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms