RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 RFX4Q33E94 735 aa13.16□□□□□ -0.3
ACTN1-217ENST00000556203 GPR139Q6DWJ6 353 aa13.16□□□□□ -0.3
ACTN1-217ENST00000556203 OR2T5Q6IEZ7 315 aa13.16□□□□□ -0.3
ACTN1-217ENST00000556203 TMEM53Q6P2H8 277 aa13.16□□□□□ -0.3
ACTN1-217ENST00000556203 AQP12AQ8IXF9 295 aa13.16□□□□□ -0.3
ACTN1-217ENST00000556203 NUP37Q8NFH4 326 aa13.16□□□□□ -0.3
ACTN1-217ENST00000556203 OR9Q2Q8NGE9 314 aa13.16□□□□□ -0.3
ACTN1-217ENST00000556203 OR2T29Q8NH02 315 aa13.16□□□□□ -0.3
ACTN1-217ENST00000556203 NABP1Q96AH0 204 aa13.16□□□□□ -0.3
ACTN1-217ENST00000556203 Q96MF0 132 aa13.16□□□□□ -0.3
ACTN1-217ENST00000556203 CHID1Q9BWS9 393 aa13.16□□□□□ -0.3
ACTN1-217ENST00000556203 CACNG6Q9BXT2 260 aa13.16□□□□□ -0.3
ACTN1-217ENST00000556203 OR52D1Q9H346 318 aa13.16□□□□□ -0.3
ACTN1-217ENST00000556203 SAMHD1Q9Y3Z3 626 aaKnown RBP13.16□□□□□ -0.3
ACTN1-217ENST00000556203 A0A1W2PPL8 197 aa13.15□□□□□ -0.3
ACTN1-217ENST00000556203 DHRS12A0PJE2 317 aa13.15□□□□□ -0.3
ACTN1-217ENST00000556203 PRSS37A4D1T9 235 aa13.15□□□□□ -0.3
ACTN1-217ENST00000556203 SOCS2O14508 198 aa13.15□□□□□ -0.3
ACTN1-217ENST00000556203 MGRN1O60291 552 aa13.15□□□□□ -0.3
ACTN1-217ENST00000556203 PPP1R3DO95685 299 aa13.15□□□□□ -0.3
ACTN1-217ENST00000556203 SERPINA5P05154 406 aa13.15□□□□□ -0.3
ACTN1-217ENST00000556203 ZNF35P13682 527 aa13.15□□□□□ -0.3
ACTN1-217ENST00000556203 SLC6A6P31641 620 aa13.15□□□□□ -0.3
ACTN1-217ENST00000556203 SERPINF1P36955 418 aa13.15□□□□□ -0.3
ACTN1-217ENST00000556203 TSPAN31Q12999 210 aa13.15□□□□□ -0.3
ACTN1-217ENST00000556203 FLOT2Q14254 428 aa13.15□□□□□ -0.3
ACTN1-217ENST00000556203 KRT80Q6KB66 452 aa13.15□□□□□ -0.3
ACTN1-217ENST00000556203 ZNF584Q8IVC4 421 aa13.15□□□□□ -0.3
ACTN1-217ENST00000556203 CANT1Q8WVQ1 401 aa13.15□□□□□ -0.3
ACTN1-217ENST00000556203 FBXO17Q96EF6 278 aa13.15□□□□□ -0.3
ACTN1-217ENST00000556203 CADM1Q9BY67 442 aaKnown RBP13.15□□□□□ -0.3
ACTN1-217ENST00000556203 KCNN2Q9H2S1 579 aa13.15□□□□□ -0.3
ACTN1-217ENST00000556203 REEP1Q9H902 201 aa13.15□□□□□ -0.3
ACTN1-217ENST00000556203 CCNB1IP1Q9NPC3 277 aa13.15□□□□□ -0.3
ACTN1-217ENST00000556203 VNN3Q9NY84 501 aa13.15□□□□□ -0.3
ACTN1-217ENST00000556203 GDF2Q9UK05 429 aaPredicted RBP13.15□□□□□ -0.3
ACTN1-217ENST00000556203 U3KQV3 271 aa13.15□□□□□ -0.3
ACTN1-217ENST00000556203 GSC2O15499 205 aa13.14□□□□□ -0.31
ACTN1-217ENST00000556203 AHCYL1O43865 530 aa13.14□□□□□ -0.31
ACTN1-217ENST00000556203 NDUFS7O75251 213 aa13.14□□□□□ -0.31
ACTN1-217ENST00000556203 TXNDC12O95881 172 aa13.14□□□□□ -0.31
ACTN1-217ENST00000556203 IGHV4-39P01824 125 aa13.14□□□□□ -0.31
ACTN1-217ENST00000556203 MMP7P09237 267 aaPredicted RBP13.14□□□□□ -0.31
ACTN1-217ENST00000556203 OR4A8P0C604 315 aa13.14□□□□□ -0.31
ACTN1-217ENST00000556203 APEHP13798 732 aaKnown RBP13.14□□□□□ -0.31
ACTN1-217ENST00000556203 NR4A1P22736 598 aa13.14□□□□□ -0.31
ACTN1-217ENST00000556203 THBS4P35443 961 aa13.14□□□□□ -0.31
ACTN1-217ENST00000556203 GUCA1AP43080 201 aaPredicted RBP13.14□□□□□ -0.31
ACTN1-217ENST00000556203 SNTB2Q13425 540 aaKnown RBP13.14□□□□□ -0.31
ACTN1-217ENST00000556203 DAG1Q14118 895 aa13.14□□□□□ -0.31
ACTN1-217ENST00000556203 ADIPOQQ15848 244 aa13.14□□□□□ -0.31
ACTN1-217ENST00000556203 ETFDHQ16134 617 aa13.14□□□□□ -0.31
ACTN1-217ENST00000556203 MST1LQ2TV78 715 aa13.14□□□□□ -0.31
ACTN1-217ENST00000556203 FAM27BQ5VT28 67 aa13.14□□□□□ -0.31
ACTN1-217ENST00000556203 ZNF770Q6IQ21 691 aaPredicted RBP13.14□□□□□ -0.31
ACTN1-217ENST00000556203 ZNF620Q6ZNG0 422 aa13.14□□□□□ -0.31
ACTN1-217ENST00000556203 FOXL2NBQ6ZUU3 175 aa13.14□□□□□ -0.31
ACTN1-217ENST00000556203 ADCK1Q86TW2 530 aa13.14□□□□□ -0.31
ACTN1-217ENST00000556203 SPATA24Q86W54 205 aa13.14□□□□□ -0.31
ACTN1-217ENST00000556203 LINC00471Q8N535 108 aa13.14□□□□□ -0.31
ACTN1-217ENST00000556203 SLC30A7Q8NEW0 376 aa13.14□□□□□ -0.31
ACTN1-217ENST00000556203 SAMD8Q96LT4 415 aa13.14□□□□□ -0.31
ACTN1-217ENST00000556203 ERMAPQ96PL5 475 aaPredicted RBP13.14□□□□□ -0.31
ACTN1-217ENST00000556203 IFT27Q9BW83 186 aa13.14□□□□□ -0.31
ACTN1-217ENST00000556203 SYT4Q9H2B2 425 aa13.14□□□□□ -0.31
ACTN1-217ENST00000556203 ZNF442Q9H7R0 627 aa13.14□□□□□ -0.31
ACTN1-217ENST00000556203 POMPQ9Y244 141 aa13.14□□□□□ -0.31
ACTN1-217ENST00000556203 USF3Q68DE3 2245 aa13.14□□□□□ -0.31
ACTN1-217ENST00000556203 F8P00451 2351 aa13.14□□□□□ -0.31
ACTN1-217ENST00000556203 TRIM64A6NGJ6 449 aa13.13□□□□□ -0.31
ACTN1-217ENST00000556203 TRIM64BA6NI03 449 aa13.13□□□□□ -0.31
ACTN1-217ENST00000556203 IMPA2O14732 288 aa13.13□□□□□ -0.31
ACTN1-217ENST00000556203 SLC16A7O60669 478 aa13.13□□□□□ -0.31
ACTN1-217ENST00000556203 ATP5HO75947 161 aa13.13□□□□□ -0.31
ACTN1-217ENST00000556203 CST1P01037 141 aa13.13□□□□□ -0.31
ACTN1-217ENST00000556203 GASTP01350 101 aa13.13□□□□□ -0.31
ACTN1-217ENST00000556203 BMP4P12644 408 aa13.13□□□□□ -0.31
ACTN1-217ENST00000556203 CTLA4P16410 223 aa13.13□□□□□ -0.31
ACTN1-217ENST00000556203 ZNF32P17041 273 aa13.13□□□□□ -0.31
ACTN1-217ENST00000556203 MSR1P21757 451 aa13.13□□□□□ -0.31
ACTN1-217ENST00000556203 LAP3P28838 519 aa13.13□□□□□ -0.31
ACTN1-217ENST00000556203 CDKN2AP42771 156 aaKnown RBP13.13□□□□□ -0.31
ACTN1-217ENST00000556203 ERFP50548 548 aa13.13□□□□□ -0.31
ACTN1-217ENST00000556203 RASSF2P50749 326 aa13.13□□□□□ -0.31
ACTN1-217ENST00000556203 SNRPD2P62316 118 aaKnown RBP13.13□□□□□ -0.31
ACTN1-217ENST00000556203 GALK2Q01415 458 aa13.13□□□□□ -0.31
ACTN1-217ENST00000556203 HSF2Q03933 536 aa13.13□□□□□ -0.31
ACTN1-217ENST00000556203 PLP2Q04941 152 aa13.13□□□□□ -0.31
ACTN1-217ENST00000556203 SWI5Q1ZZU3 235 aa13.13□□□□□ -0.31
ACTN1-217ENST00000556203 PABPC1L2AQ5JQF8 200 aa13.13□□□□□ -0.31
ACTN1-217ENST00000556203 PTCHD4Q6ZW05 846 aa13.13□□□□□ -0.31
ACTN1-217ENST00000556203 AQP11Q8NBQ7 271 aa13.13□□□□□ -0.31
ACTN1-217ENST00000556203 RERGLQ9H628 205 aa13.13□□□□□ -0.31
ACTN1-217ENST00000556203 EGLN3Q9H6Z9 239 aa13.13□□□□□ -0.31
ACTN1-217ENST00000556203 POLE4Q9NR33 117 aa13.13□□□□□ -0.31
ACTN1-217ENST00000556203 DLL4Q9NR61 685 aa13.13□□□□□ -0.31
ACTN1-217ENST00000556203 VSX1Q9NZR4 365 aaPredicted RBP13.13□□□□□ -0.31
ACTN1-217ENST00000556203 SLC7A8Q9UHI5 535 aa13.13□□□□□ -0.31
ACTN1-217ENST00000556203 SPEF1Q9Y4P9 236 aa13.13□□□□□ -0.31
ACTN1-217ENST00000556203 CDH10Q9Y6N8 788 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms