RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.16□□□□□ -0.46
CHMP4BP1-201ENST00000556017 ANGPT4Q9Y264 503 aa12.16□□□□□ -0.46
CHMP4BP1-201ENST00000556017 EVPLLA8MZ36 301 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 CLDN25C9JDP6 229 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 TMPRSS2O15393 492 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 ICMTO60725 284 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 OR6A2O95222 327 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 BCL10O95999 233 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 IGHG1P01857 330 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 ZNF32P17041 273 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 FUT4P22083 530 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 LSP1P33241 339 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 RAD52P43351 418 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 ATP4BP51164 291 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 MRPS34P82930 218 aaKnown RBP12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 FMODQ06828 376 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 TBC1D28Q2M2D7 210 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 SLC36A2Q495M3 483 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 KLF17Q5JT82 389 aaPredicted RBP12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 FAM209AQ5JX71 171 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 SPATA46Q5T0L3 261 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 THEM4Q5T1C6 240 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 DCAF12L2Q5VW00 463 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 TTC33Q6PID6 262 aaPredicted RBP12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 RFPL4BQ6ZWI9 263 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 DPPA2Q7Z7J5 298 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 NKAIN4Q8IVV8 208 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 RBM15BQ8NDT2 890 aaKnown RBP12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 DEFB108BQ8NET1 73 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 OR1J1Q8NGS3 322 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 MOSPD2Q8NHP6 518 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 PFN4Q8NHR9 129 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 HDAC2Q92769 488 aaKnown RBP12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 RAB39BQ96DA2 213 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 CGREF1Q99674 301 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 SUCNR1Q9BXA5 334 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 C1QTNF5Q9BXJ0 243 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 SLC19A3Q9BZV2 496 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 RNF121Q9H920 327 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 SAP30LQ9HAJ7 183 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 MMP26Q9NRE1 261 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 C20orf141Q9NUB4 165 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 LEF1Q9UJU2 399 aaPredicted RBP12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 SLC13A4Q9UKG4 626 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 CORO2BQ9UQ03 480 aa12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 PRKDCP78527 4128 aaKnown RBP12.15□□□□□ -0.46
CHMP4BP1-201ENST00000556017 BLOC1S5-TXNDC5H3BN57 136 aa12.14□□□□□ -0.47
CHMP4BP1-201ENST00000556017 PRSS23O95084 383 aa12.14□□□□□ -0.47
CHMP4BP1-201ENST00000556017 FARS2O95363 451 aaKnown RBP12.14□□□□□ -0.47
CHMP4BP1-201ENST00000556017 NGFP01138 241 aa12.14□□□□□ -0.47
CHMP4BP1-201ENST00000556017 ACADSP16219 412 aa12.14□□□□□ -0.47
CHMP4BP1-201ENST00000556017 STOMP27105 288 aa12.14□□□□□ -0.47
CHMP4BP1-201ENST00000556017 AQP2P41181 271 aa12.14□□□□□ -0.47
CHMP4BP1-201ENST00000556017 LIMS1P48059 325 aa12.14□□□□□ -0.47
CHMP4BP1-201ENST00000556017 ZNF81P51508 661 aa12.14□□□□□ -0.47
CHMP4BP1-201ENST00000556017 SCGB2A2Q13296 93 aa12.14□□□□□ -0.47
CHMP4BP1-201ENST00000556017 PRR31Q5SQ13 230 aa12.14□□□□□ -0.47
CHMP4BP1-201ENST00000556017 MBNL2Q5VZF2 373 aaKnown RBP12.14□□□□□ -0.47
CHMP4BP1-201ENST00000556017 SLC25A47Q6Q0C1 308 aa12.14□□□□□ -0.47
CHMP4BP1-201ENST00000556017 ICA1LQ8NDH6 482 aa12.14□□□□□ -0.47
CHMP4BP1-201ENST00000556017 SLC25A40Q8TBP6 338 aa12.14□□□□□ -0.47
CHMP4BP1-201ENST00000556017 KLF14Q8TD94 323 aaPredicted RBP12.14□□□□□ -0.47
CHMP4BP1-201ENST00000556017 SNX33Q8WV41 574 aa12.14□□□□□ -0.47
CHMP4BP1-201ENST00000556017 MPP4Q96JB8 637 aa12.14□□□□□ -0.47
CHMP4BP1-201ENST00000556017 OR2J1Q9GZK6 312 aa12.14□□□□□ -0.47
CHMP4BP1-201ENST00000556017 WNT5BQ9H1J7 359 aa12.14□□□□□ -0.47
CHMP4BP1-201ENST00000556017 SIAEQ9HAT2 523 aa12.14□□□□□ -0.47
CHMP4BP1-201ENST00000556017 GPR160Q9UJ42 338 aa12.14□□□□□ -0.47
CHMP4BP1-201ENST00000556017 PCDHGB1Q9Y5G3 927 aa12.14□□□□□ -0.47
CHMP4BP1-201ENST00000556017 IQCMA0A1B0GVH7 501 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 CENPBD1B2RD01 187 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 TRAPPC2LH3BP13 241 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 SPRY3O43610 288 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 MT-ND1P03886 318 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 HKR1P10072 659 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 FUT1P19526 365 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 TNFRSF1BP20333 461 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 PCGF2P35227 344 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 CLRN1P58418 232 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 SELENOVP59797 346 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 LCN2P80188 198 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 PSG4Q00888 419 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 TEKQ02763 1124 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 HFEQ30201 348 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 ZNF771Q7L3S4 317 aaPredicted RBP12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 NANOGNBQ7Z5D8 188 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 DHDDSQ86SQ9 333 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 CLDN22Q8N7P3 220 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 OR1J2Q8NGS2 313 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 AKR7LQ8NHP1 331 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 NANPQ8TBE9 248 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 TMEM255BQ8WV15 326 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 LIPHQ8WWY8 451 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 GEMIN6Q8WXD5 167 aaKnown RBP12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 CCL17Q92583 94 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 ELMOD3Q96FG2 381 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 ZNF48Q96MX3 618 aaPredicted RBP12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 JMJD8Q96S16 334 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 ZNF747Q9BV97 191 aa12.13□□□□□ -0.47
CHMP4BP1-201ENST00000556017 C7orf69Q9H7B7 122 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms