RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 PANX1Q96RD7 426 aa2.45□□□□□ -2.02
MTHFD1-212ENST00000555858 SLC6A7Q99884 636 aa2.45□□□□□ -2.02
MTHFD1-212ENST00000555858 ATF6BQ99941 703 aa2.45□□□□□ -2.02
MTHFD1-212ENST00000555858 NIPSNAP1Q9BPW8 284 aa2.45□□□□□ -2.02
MTHFD1-212ENST00000555858 YTHDF1Q9BYJ9 559 aaKnown RBP2.45□□□□□ -2.02
MTHFD1-212ENST00000555858 PRRG3Q9BZD7 231 aa2.45□□□□□ -2.02
MTHFD1-212ENST00000555858 UCK2Q9BZX2 261 aa2.45□□□□□ -2.02
MTHFD1-212ENST00000555858 NAT10Q9H0A0 1025 aaKnown RBP2.45□□□□□ -2.02
MTHFD1-212ENST00000555858 SPNS1Q9H2V7 528 aa2.45□□□□□ -2.02
MTHFD1-212ENST00000555858 TRABDQ9H4I3 376 aa2.45□□□□□ -2.02
MTHFD1-212ENST00000555858 SGK2Q9HBY8 427 aa2.45□□□□□ -2.02
MTHFD1-212ENST00000555858 SLC2A8Q9NY64 477 aa2.45□□□□□ -2.02
MTHFD1-212ENST00000555858 TREM2Q9NZC2 230 aa2.45□□□□□ -2.02
MTHFD1-212ENST00000555858 SLC17A7Q9P2U7 560 aa2.45□□□□□ -2.02
MTHFD1-212ENST00000555858 SMPXQ9UHP9 88 aa2.45□□□□□ -2.02
MTHFD1-212ENST00000555858 PSG11Q9UQ72 335 aa2.45□□□□□ -2.02
MTHFD1-212ENST00000555858 RASD1Q9Y272 281 aa2.45□□□□□ -2.02
MTHFD1-212ENST00000555858 NDUFAF1Q9Y375 327 aa2.45□□□□□ -2.02
MTHFD1-212ENST00000555858 RBMX2Q9Y388 322 aaKnown RBP2.45□□□□□ -2.02
MTHFD1-212ENST00000555858 L3MBTL1Q9Y468 752 aa2.45□□□□□ -2.02
MTHFD1-212ENST00000555858 MMACHCQ9Y4U1 282 aa2.45□□□□□ -2.02
MTHFD1-212ENST00000555858 MMP24Q9Y5R2 645 aa2.45□□□□□ -2.02
MTHFD1-212ENST00000555858 FAM135AQ9P2D6 1515 aa2.45□□□□□ -2.02
MTHFD1-212ENST00000555858 METP08581 1390 aa2.45□□□□□ -2.02
MTHFD1-212ENST00000555858 POLA1P09884 1462 aaPredicted RBP2.45□□□□□ -2.02
MTHFD1-212ENST00000555858 ARAP1Q96P48 1450 aa2.45□□□□□ -2.02
MTHFD1-212ENST00000555858 PBRM1Q86U86 1689 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 UHRF1BP1Q6BDS2 1440 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 PRDM15P57071 1507 aaPredicted RBP2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 IGHV3OR16-12A0A075B7B8 117 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 A0A1B0GV72 72 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 A0A1W2PQL4 384 aaPredicted RBP2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 A0A1W2PRG6 482 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 TRABD2BA6NFA1 517 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 FAM25AB3EWG3 89 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 FAM25CB3EWG5 89 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 FAM25GB3EWG6 89 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 MKRN2OSH3BPM6 223 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 KLRC4-KLRK1H3BQV0 150 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 KPNA3O00505 521 aaPredicted RBP2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 BCKDKO14874 412 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 TCAPO15273 167 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 NUPL2O15504 423 aaKnown RBP2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 DFNA5O60443 496 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 SRPX2O60687 465 aaPredicted RBP2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 CCDC22O60826 627 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 MED6O75586 246 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 DCTN3O75935 186 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 LRATO95237 230 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 ATP6V1G2O95670 118 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 FADS2O95864 444 aaKnown RBP2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 FAM107AO95990 144 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 OCM2P0CE71 109 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 GIMD1P0DJR0 217 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 SCGB1A1P11684 91 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 ADRB3P13945 408 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 PVRP15151 417 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 OGNP20774 298 aaKnown RBP2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 CXCR2P25025 360 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 LMO2P25791 158 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 ERP29P30040 261 aaKnown RBP2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 CA5AP35218 305 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 ARR3P36575 388 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 FDFT1P37268 417 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 GNPDA1P46926 289 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 IDH2P48735 452 aaKnown RBP2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 ESRRGP62508 458 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 ERVK-25P63136 954 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 ADARB1P78563 741 aaKnown RBP2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 TFAMQ00059 246 aaKnown RBP2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 DEFA6Q01524 100 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 ZFP36L1Q07352 338 aaKnown RBP2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 MADCAM1Q13477 382 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 AQP6Q13520 282 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 DPYSL3Q14195 570 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 LY6DQ14210 128 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 TRAM2Q15035 370 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 CNPY1Q3B7I2 92 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 C14orf28Q4W4Y0 310 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 VWA2Q5GFL6 755 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 XKR7Q5GH72 579 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 TNFAIP8L3Q5GJ75 292 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 PIGGQ5H8A4 983 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 DNLZQ5SXM8 178 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 LGSNQ5TDP6 509 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 C9orf135Q5VTT2 229 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 KHDRBS2Q5VWX1 349 aaKnown RBP2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 OR8G2PQ6IF36 304 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 OR52E8Q6IFG1 317 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 RWDD4Q6NW29 188 aaKnown RBP2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 ZNF544Q6NX49 715 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 H3F3CQ6NXT2 135 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 FAHD2BQ6P2I3 314 aaPredicted RBP2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 DHRS4L2Q6PKH6 230 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 TMEM220Q6QAJ8 160 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 HSDL2Q6YN16 418 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 PRSS48Q7RTY5 328 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 APTXQ7Z2E3 356 aaKnown RBP2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 SCD5Q86SK9 330 aa2.44□□□□□ -2.02
MTHFD1-212ENST00000555858 NT5DC3Q86UY8 548 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms