RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 APH1BQ8WW43 257 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 TEAD3Q99594 435 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 FOXB1Q99853 325 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 NMNAT2Q9BZQ4 307 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 CCDC90BQ9GZT6 254 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 GPR35Q9HC97 309 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 MOV10Q9HCE1 1003 aaKnown RBP9.9□□□□□ -0.82
SHMT2-220ENST00000555634 PLCXD1Q9NUJ7 323 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 HAO2Q9NYQ3 351 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 TAS2R16Q9NYV7 291 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 FOXD3Q9UJU5 478 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-220ENST00000555634 B9D1Q9UPM9 204 aa9.9□□□□□ -0.82
SHMT2-220ENST00000555634 EXOSC1Q9Y3B2 195 aaKnown RBP9.9□□□□□ -0.82
SHMT2-220ENST00000555634 RP1L1Q8IWN7 2480 aaPredicted RBP9.9□□□□□ -0.83
SHMT2-220ENST00000555634 ASH1LQ9NR48 2969 aaKnown RBP9.89□□□□□ -0.83
SHMT2-220ENST00000555634 IGLV1-36A0A0B4J1U3 117 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 ZNF670-ZNF695F2Z2N8 137 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 MSTNO14793 375 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 MRPS14O60783 128 aaKnown RBP9.89□□□□□ -0.83
SHMT2-220ENST00000555634 WBP4O75554 376 aaKnown RBP9.89□□□□□ -0.83
SHMT2-220ENST00000555634 WISP2O76076 250 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 MRPL3P09001 348 aaKnown RBP9.89□□□□□ -0.83
SHMT2-220ENST00000555634 OR8G3PP0DMU2 310 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 SLC2A5P22732 501 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 MPGP29372 298 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 CHRNB4P30926 498 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 CEACAM8P31997 349 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-220ENST00000555634 CAPZA2P47755 286 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 ENTPD1P49961 510 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 UBE2NP61088 152 aaKnown RBP9.89□□□□□ -0.83
SHMT2-220ENST00000555634 HSF2Q03933 536 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 RUNX1T1Q06455 604 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 MRPL49Q13405 166 aaKnown RBP9.89□□□□□ -0.83
SHMT2-220ENST00000555634 P2RY6Q15077 328 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 GUSBP1Q15486 140 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 CEACAM16Q2WEN9 425 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 SLC36A2Q495M3 483 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 TSPO2Q5TGU0 170 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 OR7E24Q6IFN5 339 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 KCTD18Q6PI47 426 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-220ENST00000555634 ZNF813Q6ZN06 617 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 SLC16A9Q7RTY1 509 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 NUFIP2Q7Z417 695 aaKnown RBP9.89□□□□□ -0.83
SHMT2-220ENST00000555634 OR6V1Q8N148 313 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 ZNF454Q8N9F8 522 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 C1orf162Q8NEQ5 155 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-220ENST00000555634 OR10H4Q8NGA5 316 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 OR51L1Q8NGJ5 315 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 PRR7Q8TB68 274 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 ZMYND19Q96E35 227 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-220ENST00000555634 TMEM80Q96HE8 168 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 USB1Q9BQ65 265 aaKnown RBP9.89□□□□□ -0.83
SHMT2-220ENST00000555634 WACQ9BTA9 647 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 YIPF3Q9GZM5 350 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 SLC7A10Q9NS82 523 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 LAMP5Q9UJQ1 280 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 ING1Q9UK53 422 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-220ENST00000555634 COA3Q9Y2R0 106 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-220ENST00000555634 COMMD3-BMI1R4GMX3 469 aa9.89□□□□□ -0.83
SHMT2-220ENST00000555634 DAPL1A0PJW8 107 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 MAGEA13PA6NCF6 341 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 FAM171A2A8MVW0 826 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 PTGES3LE9PB15 166 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 RPL36A-HNRNPH2H7BZ11 118 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 XPNPEP2O43895 674 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 UPK3AO75631 287 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 TNFSF13O75888 250 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 OR2T7P0C7T2 308 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 CLUP10909 449 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 PAX7P23759 505 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 IL32P24001 234 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 CRHBPP24387 322 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 DCKP27707 260 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 NAA10P41227 235 aaPredicted RBP9.88□□□□□ -0.83
SHMT2-220ENST00000555634 KIR2DL2P43627 348 aaPredicted RBP9.88□□□□□ -0.83
SHMT2-220ENST00000555634 ZNF133P52736 654 aaPredicted RBP9.88□□□□□ -0.83
SHMT2-220ENST00000555634 MRPS34P82930 218 aaKnown RBP9.88□□□□□ -0.83
SHMT2-220ENST00000555634 EFNB1P98172 346 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 SCRN3Q0VDG4 424 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 AQP6Q13520 282 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 SGCAQ16586 387 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 SMN1Q16637 294 aaKnown RBP9.88□□□□□ -0.83
SHMT2-220ENST00000555634 SLC25A35Q3KQZ1 300 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 C4orf17Q53FE4 359 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 ZNF362Q5T0B9 420 aaPredicted RBP9.88□□□□□ -0.83
SHMT2-220ENST00000555634 SLC18B1Q6NT16 456 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 ZNF544Q6NX49 715 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 TMEM53Q6P2H8 277 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 ANKRD16Q6P6B7 361 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 VWA1Q6PCB0 445 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 SLC25A47Q6Q0C1 308 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 TMPRSS11AQ6ZMR5 421 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 SSX8Q7RTT4 187 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.88□□□□□ -0.83
SHMT2-220ENST00000555634 FJX1Q86VR8 437 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 SLC35F2Q8IXU6 374 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 CCDC36Q8IYA8 594 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 C17orf78Q8N4C9 275 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 ACBD7Q8N6N7 88 aa9.88□□□□□ -0.83
SHMT2-220ENST00000555634 SLC26A10Q8NG04 563 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms