RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 SERPINA5P05154 406 aa11.8□□□□□ -0.52
SNX6-203ENST00000555416 NR4A1P22736 598 aa11.8□□□□□ -0.52
SNX6-203ENST00000555416 MAGEA2P43356 314 aa11.8□□□□□ -0.52
SNX6-203ENST00000555416 SNTB2Q13425 540 aaKnown RBP11.8□□□□□ -0.52
SNX6-203ENST00000555416 DAG1Q14118 895 aa11.8□□□□□ -0.52
SNX6-203ENST00000555416 SGCAQ16586 387 aa11.8□□□□□ -0.52
SNX6-203ENST00000555416 FOXL2NBQ6ZUU3 175 aa11.8□□□□□ -0.52
SNX6-203ENST00000555416 PTCHD4Q6ZW05 846 aa11.8□□□□□ -0.52
SNX6-203ENST00000555416 SLC16A14Q7RTX9 510 aa11.8□□□□□ -0.52
SNX6-203ENST00000555416 DHFR2Q86XF0 187 aa11.8□□□□□ -0.52
SNX6-203ENST00000555416 ARHGAP24Q8N264 748 aa11.8□□□□□ -0.52
SNX6-203ENST00000555416 ZCCHC24Q8N2G6 241 aaKnown RBP11.8□□□□□ -0.52
SNX6-203ENST00000555416 CPEB3Q8NE35 698 aaKnown RBP11.8□□□□□ -0.52
SNX6-203ENST00000555416 OR4C15Q8NGM1 316 aa11.8□□□□□ -0.52
SNX6-203ENST00000555416 SORCS2Q96PQ0 1159 aa11.8□□□□□ -0.52
SNX6-203ENST00000555416 THTPAQ9BU02 230 aa11.8□□□□□ -0.52
SNX6-203ENST00000555416 C1orf21Q9H246 121 aa11.8□□□□□ -0.52
SNX6-203ENST00000555416 RNF121Q9H920 327 aa11.8□□□□□ -0.52
SNX6-203ENST00000555416 SIAEQ9HAT2 523 aa11.8□□□□□ -0.52
SNX6-203ENST00000555416 NRIP3Q9NQ35 241 aa11.8□□□□□ -0.52
SNX6-203ENST00000555416 STX18Q9P2W9 335 aaKnown RBP11.8□□□□□ -0.52
SNX6-203ENST00000555416 PRPF19Q9UMS4 504 aaKnown RBP11.8□□□□□ -0.52
SNX6-203ENST00000555416 AURKCQ9UQB9 309 aa11.8□□□□□ -0.52
SNX6-203ENST00000555416 IER3IP1Q9Y5U9 82 aa11.8□□□□□ -0.52
SNX6-203ENST00000555416 LYVE1Q9Y5Y7 322 aa11.8□□□□□ -0.52
SNX6-203ENST00000555416 TLN2Q9Y4G6 2542 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 A6NIZ1 184 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 RNF223E7ERA6 249 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 SOCS2O14508 198 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 LY6G6DO95868 133 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 CTLA4P16410 223 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 APEX1P27695 318 aaKnown RBP11.79□□□□□ -0.52
SNX6-203ENST00000555416 LAP3P28838 519 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 CDKN2AP42771 156 aaKnown RBP11.79□□□□□ -0.52
SNX6-203ENST00000555416 GSSP48637 474 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 SMIM11AP58511 58 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 RAP1BP61224 184 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 RAP1AP62834 184 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 KRR1Q13601 381 aaKnown RBP11.79□□□□□ -0.52
SNX6-203ENST00000555416 ENDOGQ14249 297 aaKnown RBP11.79□□□□□ -0.52
SNX6-203ENST00000555416 EFNB3Q15768 340 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 NRN1LQ496H8 165 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 THEM4Q5T1C6 240 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 FAM205BPQ63HN1 556 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 PGBD2Q6P3X8 592 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 UGT2A3Q6UWM9 527 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 LRP11Q86VZ4 500 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 SVOPLQ8N434 492 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 ZNF525Q8N782 197 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 IL17RDQ8NFM7 739 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 OR9Q2Q8NGE9 314 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 ZNF570Q96NI8 536 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 GPX7Q96SL4 187 aaPredicted RBP11.79□□□□□ -0.52
SNX6-203ENST00000555416 DOK1Q99704 481 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 BTBD10Q9BSF8 475 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 BDH2Q9BUT1 245 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 PLK3Q9H4B4 646 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 DENND2DQ9H6A0 471 aaPredicted RBP11.79□□□□□ -0.52
SNX6-203ENST00000555416 ZNF442Q9H7R0 627 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 GRHPRQ9UBQ7 328 aa11.79□□□□□ -0.52
SNX6-203ENST00000555416 ZFHX3Q15911 3703 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 CR1P17927 2039 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 IGHV4-30-2A0A087WSY4 118 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 A0A1W2PPL8 197 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 PRSS37A4D1T9 235 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 OR10H3O60404 316 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 FARS2O95363 451 aaKnown RBP11.78□□□□□ -0.52
SNX6-203ENST00000555416 PPP1R3DO95685 299 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 ZNF32P17041 273 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 NPR2P20594 1047 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 FPR3P25089 353 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 SDHAP31040 664 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 HMGA2P52926 109 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 ERVS71-1P61550 626 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 CHRNB3Q05901 458 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 KRTAP1-1Q07627 177 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 RAB35Q15286 201 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 PABPC1L2AQ5JQF8 200 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 FAM27BQ5VT28 67 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 ZNF770Q6IQ21 691 aaPredicted RBP11.78□□□□□ -0.52
SNX6-203ENST00000555416 PGM2L1Q6PCE3 622 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 SMARCD3Q6STE5 483 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 BIVMQ86UB2 503 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 SLC30A7Q8NEW0 376 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 AKR7LQ8NHP1 331 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 FANK1Q8TC84 345 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 ASB9Q96DX5 294 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 TSSK2Q96PF2 358 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 RBP7Q96R05 134 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 MRPL37Q9BZE1 423 aaKnown RBP11.78□□□□□ -0.52
SNX6-203ENST00000555416 WNT5BQ9H1J7 359 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 SYT4Q9H2B2 425 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 OR51B6Q9H340 312 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 OR52D1Q9H346 318 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 MUC13Q9H3R2 512 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 EMC7Q9NPA0 242 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 MYEF2Q9P2K5 600 aaKnown RBP11.78□□□□□ -0.52
SNX6-203ENST00000555416 FZR1Q9UM11 496 aa11.78□□□□□ -0.52
SNX6-203ENST00000555416 NIPBLQ6KC79 2804 aaeCLIP11.78□□□□□ -0.52
SNX6-203ENST00000555416 C2CD3Q4AC94 2353 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms