RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 PRKYO43930 277 aa11.1□□□□□ -0.63
SYNE2-219ENST00000555323 PAICSP22234 425 aaKnown RBP11.1□□□□□ -0.63
SYNE2-219ENST00000555323 LAP3P28838 519 aa11.1□□□□□ -0.63
SYNE2-219ENST00000555323 GGT2P36268 569 aa11.1□□□□□ -0.63
SYNE2-219ENST00000555323 PTDSS1P48651 473 aaKnown RBP11.1□□□□□ -0.63
SYNE2-219ENST00000555323 CENPAP49450 140 aa11.1□□□□□ -0.63
SYNE2-219ENST00000555323 KEAP1Q14145 624 aa11.1□□□□□ -0.63
SYNE2-219ENST00000555323 TAB1Q15750 504 aa11.1□□□□□ -0.63
SYNE2-219ENST00000555323 SLC25A30Q5SVS4 291 aa11.1□□□□□ -0.63
SYNE2-219ENST00000555323 LINC01590Q5TEZ4 76 aa11.1□□□□□ -0.63
SYNE2-219ENST00000555323 SP5Q6BEB4 398 aaPredicted RBP11.1□□□□□ -0.63
SYNE2-219ENST00000555323 ZNF813Q6ZN06 617 aa11.1□□□□□ -0.63
SYNE2-219ENST00000555323 GLB1L2Q8IW92 636 aa11.1□□□□□ -0.63
SYNE2-219ENST00000555323 FAM169BQ8N8A8 192 aa11.1□□□□□ -0.63
SYNE2-219ENST00000555323 OR8J1Q8NGP2 316 aa11.1□□□□□ -0.63
SYNE2-219ENST00000555323 ZNRF4Q8WWF5 429 aa11.1□□□□□ -0.63
SYNE2-219ENST00000555323 NSMAFQ92636 917 aa11.1□□□□□ -0.63
SYNE2-219ENST00000555323 NABP1Q96AH0 204 aa11.1□□□□□ -0.63
SYNE2-219ENST00000555323 RASSF4Q9H2L5 321 aa11.1□□□□□ -0.63
SYNE2-219ENST00000555323 VCXQ9H320 206 aa11.1□□□□□ -0.63
SYNE2-219ENST00000555323 HINT3Q9NQE9 182 aaKnown RBP11.1□□□□□ -0.63
SYNE2-219ENST00000555323 B3GNT2Q9NY97 397 aa11.1□□□□□ -0.63
SYNE2-219ENST00000555323 MOKQ9UQ07 419 aa11.1□□□□□ -0.63
SYNE2-219ENST00000555323 COA3Q9Y2R0 106 aaPredicted RBP11.1□□□□□ -0.63
SYNE2-219ENST00000555323 AMDHD2Q9Y303 409 aa11.1□□□□□ -0.63
SYNE2-219ENST00000555323 FAM183AA6NL82 134 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 PRR23D1E9PI22 279 aaPredicted RBP11.09□□□□□ -0.63
SYNE2-219ENST00000555323 H0YAE9 185 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 TLX2O43763 284 aaPredicted RBP11.09□□□□□ -0.63
SYNE2-219ENST00000555323 HRGP04196 525 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 SCG5P05408 212 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 THBDP07204 575 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 PRR23D2P0DMB1 279 aaPredicted RBP11.09□□□□□ -0.63
SYNE2-219ENST00000555323 EPXP11678 715 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 B4GALT1P15291 398 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 SPI1P17947 270 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 CDAP32320 146 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 GUCA1AP43080 201 aaPredicted RBP11.09□□□□□ -0.63
SYNE2-219ENST00000555323 KIR2DL3P43628 341 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 BLVRAP53004 296 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 CDC42P60953 191 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 LSM6P62312 80 aaKnown RBP11.09□□□□□ -0.63
SYNE2-219ENST00000555323 ADARB1P78563 741 aaKnown RBP11.09□□□□□ -0.63
SYNE2-219ENST00000555323 HSF2Q03933 536 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 GLO1Q04760 184 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 HIKESHIQ53FT3 197 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 AADACL4Q5VUY2 407 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 TTC23Q5W5X9 447 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 PLBD1Q6P4A8 553 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 SEZ6L2Q6UXD5 910 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 DPPA2Q7Z7J5 298 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 SYT9Q86SS6 491 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 CPOQ8IVL8 374 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 SKA3Q8IX90 412 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 TCEANCQ8N8B7 351 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 LINC01560Q8TB33 94 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 TMEM163Q8TC26 289 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 MUCL1Q96DR8 90 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 PLEKHA8Q96JA3 519 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 HCAR1Q9BXC0 346 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 VCX3BQ9H321 246 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 MOV10Q9HCE1 1003 aaKnown RBP11.09□□□□□ -0.63
SYNE2-219ENST00000555323 POLE4Q9NR33 117 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 ZNF224Q9NZL3 707 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 ADGRG4Q8IZF6 3080 aa11.09□□□□□ -0.63
SYNE2-219ENST00000555323 A0A096LPE4 126 aa11.08□□□□□ -0.64
SYNE2-219ENST00000555323 A0A1W2PPZ6 126 aa11.08□□□□□ -0.64
SYNE2-219ENST00000555323 SH3D21A4FU49 640 aa11.08□□□□□ -0.64
SYNE2-219ENST00000555323 PRODHO43272 600 aa11.08□□□□□ -0.64
SYNE2-219ENST00000555323 FARS2O95363 451 aaKnown RBP11.08□□□□□ -0.64
SYNE2-219ENST00000555323 WNT11O96014 354 aa11.08□□□□□ -0.64
SYNE2-219ENST00000555323 TFP02787 698 aa11.08□□□□□ -0.64
SYNE2-219ENST00000555323 CST2P09228 141 aa11.08□□□□□ -0.64
SYNE2-219ENST00000555323 GAAP10253 952 aa11.08□□□□□ -0.64
SYNE2-219ENST00000555323 CLUP10909 449 aa11.08□□□□□ -0.64
SYNE2-219ENST00000555323 GABRB1P18505 474 aa11.08□□□□□ -0.64
SYNE2-219ENST00000555323 MSR1P21757 451 aa11.08□□□□□ -0.64
SYNE2-219ENST00000555323 SLC2A5P22732 501 aa11.08□□□□□ -0.64
SYNE2-219ENST00000555323 SNRPGP62308 76 aaKnown RBP11.08□□□□□ -0.64
SYNE2-219ENST00000555323 SNTB1Q13884 538 aaKnown RBP11.08□□□□□ -0.64
SYNE2-219ENST00000555323 DAZAP2Q15038 168 aaPredicted RBP11.08□□□□□ -0.64
SYNE2-219ENST00000555323 C3orf36Q3SXR2 165 aa11.08□□□□□ -0.64
SYNE2-219ENST00000555323 SLC35D3Q5M8T2 416 aa11.08□□□□□ -0.64
SYNE2-219ENST00000555323 NXNL2Q5VZ03 156 aa11.08□□□□□ -0.64
SYNE2-219ENST00000555323 KLHL24Q6TFL4 600 aa11.08□□□□□ -0.64
SYNE2-219ENST00000555323 CXXC5Q7LFL8 322 aaKnown RBP11.08□□□□□ -0.64
SYNE2-219ENST00000555323 DEPDC4Q8N2C3 294 aa11.08□□□□□ -0.64
SYNE2-219ENST00000555323 DHRSXQ8N5I4 330 aa11.08□□□□□ -0.64
SYNE2-219ENST00000555323 ZNF555Q8NEP9 628 aa11.08□□□□□ -0.64
SYNE2-219ENST00000555323 SLC26A10Q8NG04 563 aa11.08□□□□□ -0.64
SYNE2-219ENST00000555323 OR9Q1Q8NGQ5 310 aa11.08□□□□□ -0.64
SYNE2-219ENST00000555323 FAM222BQ8WU58 562 aa11.08□□□□□ -0.64
SYNE2-219ENST00000555323 TFAP2CQ92754 450 aa11.08□□□□□ -0.64
SYNE2-219ENST00000555323 UBE2FQ969M7 185 aa11.08□□□□□ -0.64
SYNE2-219ENST00000555323 ZNF75AQ96N20 296 aa11.08□□□□□ -0.64
SYNE2-219ENST00000555323 MED18Q9BUE0 208 aa11.08□□□□□ -0.64
SYNE2-219ENST00000555323 SEC61A2Q9H9S3 476 aa11.08□□□□□ -0.64
SYNE2-219ENST00000555323 ZNF226Q9NYT6 803 aa11.08□□□□□ -0.64
SYNE2-219ENST00000555323 CRNNQ9UBG3 495 aaPredicted RBP11.08□□□□□ -0.64
SYNE2-219ENST00000555323 GMPPBQ9Y5P6 360 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms