RNA–Protein interactions for RNA: ENST00000555137.5

HNRNPC-216, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-216ENST00000555137 PCGF3Q3KNV8 242 aa8.19□□□□□ -1.1
HNRNPC-216ENST00000555137 LRRC23Q53EV4 343 aaPredicted RBP8.19□□□□□ -1.1
HNRNPC-216ENST00000555137 PRR31Q5SQ13 230 aa8.19□□□□□ -1.1
HNRNPC-216ENST00000555137 SWT1Q5T5J6 900 aaKnown RBP8.19□□□□□ -1.1
HNRNPC-216ENST00000555137 DCAF12L2Q5VW00 463 aa8.19□□□□□ -1.1
HNRNPC-216ENST00000555137 ERICH5Q6P6B1 374 aa8.19□□□□□ -1.1
HNRNPC-216ENST00000555137 TMEM154Q6P9G4 183 aa8.19□□□□□ -1.1
HNRNPC-216ENST00000555137 PATL1Q86TB9 770 aaKnown RBP8.19□□□□□ -1.1
HNRNPC-216ENST00000555137 TREML1Q86YW5 311 aa8.19□□□□□ -1.1
HNRNPC-216ENST00000555137 ICA1LQ8NDH6 482 aa8.19□□□□□ -1.1
HNRNPC-216ENST00000555137 OR6X1Q8NH79 312 aa8.19□□□□□ -1.1
HNRNPC-216ENST00000555137 ZNF519Q8TB69 540 aa8.19□□□□□ -1.1
HNRNPC-216ENST00000555137 SYNPRQ8TBG9 265 aa8.19□□□□□ -1.1
HNRNPC-216ENST00000555137 DVL3Q92997 716 aaPredicted RBP8.19□□□□□ -1.1
HNRNPC-216ENST00000555137 RAB39BQ96DA2 213 aa8.19□□□□□ -1.1
HNRNPC-216ENST00000555137 JMJD8Q96S16 334 aa8.19□□□□□ -1.1
HNRNPC-216ENST00000555137 SUCNR1Q9BXA5 334 aa8.19□□□□□ -1.1
HNRNPC-216ENST00000555137 TMEM27Q9HBJ8 222 aa8.19□□□□□ -1.1
HNRNPC-216ENST00000555137 CDH20Q9HBT6 801 aa8.19□□□□□ -1.1
HNRNPC-216ENST00000555137 NKIRAS2Q9NYR9 191 aa8.19□□□□□ -1.1
HNRNPC-216ENST00000555137 TAS2R5Q9NYW4 299 aa8.19□□□□□ -1.1
HNRNPC-216ENST00000555137 SELENONQ9NZV5 590 aa8.19□□□□□ -1.1
HNRNPC-216ENST00000555137 PPIAL4AQ9Y536 164 aa8.19□□□□□ -1.1
HNRNPC-216ENST00000555137 ZSCAN5BA6NJL1 495 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 CPSF4LA6NMK7 179 aaKnown RBP8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 CLDN25C9JDP6 229 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 J3QLI3 93 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 M0QX08 132 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 PRSS23O95084 383 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 SNAP29O95721 258 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 CH25HO95992 272 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 MT-ATP6P00846 226 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 MMP7P09237 267 aaPredicted RBP8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 QDPRP09417 244 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 ANPEPP15144 967 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 RAD52P43351 418 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 GZMMP51124 257 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 UCP2P55851 309 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 LCN2P80188 198 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 ZNF74Q16587 644 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 SPRNQ5BIV9 151 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 SPATA46Q5T0L3 261 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 CALHM3Q86XJ0 350 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 RBM45Q8IUH3 476 aaKnown RBP8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 ZNF101Q8IZC7 436 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 BPIFB2Q8N4F0 458 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 CPEB3Q8NE35 698 aaKnown RBP8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 OR2T12Q8NG77 320 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 GPR32P1Q8NGA4 272 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 OR4D11Q8NGI4 311 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 NANPQ8TBE9 248 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 SNX33Q8WV41 574 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 RASSF5Q8WWW0 418 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 C11orf40Q8WZ69 217 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 ZNF566Q969W8 418 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 TAMM41Q96BW9 452 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 SLC25A44Q96H78 314 aaPredicted RBP8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 C1orf147Q96MC9 270 aaPredicted RBP8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 DUX5Q96PT3 197 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 ZNF347Q96SE7 839 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 MCHR1Q99705 422 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 ARHGDIGQ99819 225 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 ZNF747Q9BV97 191 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 C7orf69Q9H7B7 122 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 EVA1AQ9H8M9 152 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 SAP30LQ9HAJ7 183 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 DCAF16Q9NXF7 216 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 TANC2Q9HCD6 1990 aa8.18□□□□□ -1.1
HNRNPC-216ENST00000555137 SLC22A23A1A5C7 686 aa8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 KPNA4O00629 521 aaPredicted RBP8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 TPD52L2O43399 206 aaKnown RBP8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 RNF13O43567 381 aa8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 CHP2O43745 196 aa8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 UBOX5O94941 541 aa8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 BCL10O95999 233 aa8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 IGHV1-46P01743 117 aa8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 IGHV3-13P01766 116 aa8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 HKR1P10072 659 aa8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 CD247P20963 164 aa8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 ZFP36P26651 326 aaKnown RBP8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 MPV17P39210 176 aa8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 WNT5AP41221 380 aa8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 MMP15P51511 669 aa8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 SLC7A2P52569 658 aa8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 SELENOVP59797 346 aa8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 HIST3H3Q16695 136 aa8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 DUSP7Q16829 419 aa8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 TBC1D28Q2M2D7 210 aa8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 TMEM53Q6P2H8 277 aa8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 ZNF613Q6PF04 617 aa8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 SLC16A14Q7RTX9 510 aa8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 MICU2Q8IYU8 434 aa8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 LRRC18Q8N456 261 aa8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 TEX29Q8N6K0 151 aa8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 RBM15BQ8NDT2 890 aaKnown RBP8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 DEFB108BQ8NET1 73 aa8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 OR6T1Q8NGN1 323 aa8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 IPCEF1Q8WWN9 437 aaPredicted RBP8.17□□□□□ -1.1
HNRNPC-216ENST00000555137 TAF15Q92804 592 aaKnown RBP eCLIP8.17□□□□□ -1.11e-7■□□□□ 10.8
HNRNPC-216ENST00000555137 CMTM5Q96DZ9 223 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms