RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 TRAV1-2A0A0B4J238 106 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 FAM172BPA6NC97 362 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 PROB1E7EW31 1015 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 PHYHO14832 338 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 SLC16A7O60669 478 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 SERPINI2O75830 405 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 AQP8O94778 261 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 IL32P24001 234 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 TNFSF8P32971 234 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 KIR3DL2P43630 455 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 AGFG1P52594 562 aaKnown RBP7.93□□□□□ -1.14
TDP1-210ENST00000554976 CAV3P56539 151 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 RAC1P63000 192 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 ARL9Q6T311 187 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 SNX29P2Q8IUI4 249 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 OR6X1Q8NH79 312 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 NEIL3Q8TAT5 605 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 SLC39A7Q92504 469 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 TMEM54Q969K7 222 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 ZNF486Q96H40 463 aaPredicted RBP7.93□□□□□ -1.14
TDP1-210ENST00000554976 IP6K3Q96PC2 410 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 OR5B2Q96R09 309 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 OR8B4Q96RC9 309 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 PRRX2Q99811 253 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 COL25A1Q9BXS0 654 aaPredicted RBP7.93□□□□□ -1.14
TDP1-210ENST00000554976 C6orf62Q9GZU0 229 aaPredicted RBP7.93□□□□□ -1.14
TDP1-210ENST00000554976 TMEM185BQ9H7F4 350 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 SLCO1C1Q9NYB5 712 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 GPR179Q6PRD1 2367 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 A0A0J9YW62 118 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 XKRYO14609 159 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 UPK1BO75841 260 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 TSPAN9O75954 239 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 NCR1O76036 304 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 GLSO94925 669 aaPredicted RBP7.93□□□□□ -1.14
TDP1-210ENST00000554976 MPZL1O95297 269 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 CRABP1P29762 137 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 PSMB10P40306 273 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 RPS27P42677 84 aaKnown RBP7.93□□□□□ -1.14
TDP1-210ENST00000554976 GBX2P52951 348 aaPredicted RBP7.93□□□□□ -1.14
TDP1-210ENST00000554976 BLVRAP53004 296 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 SLC35A1P78382 337 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 MRPL28Q13084 256 aaKnown RBP7.93□□□□□ -1.14
TDP1-210ENST00000554976 AIMP2Q13155 320 aaKnown RBP7.93□□□□□ -1.14
TDP1-210ENST00000554976 KCNMB1Q16558 191 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 MEP1BQ16820 701 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 HYAL4Q2M3T9 481 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 LRRC69Q6ZNQ3 347 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 PLEKHG7Q6ZR37 379 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 DPY19L4Q7Z388 723 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 TMEM123Q8N131 208 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 MS4A15Q8N5U1 240 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 LINC00469Q8N7U9 141 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 FAM83FQ8NEG4 500 aaPredicted RBP7.93□□□□□ -1.14
TDP1-210ENST00000554976 IL17RDQ8NFM7 739 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 HAVCR2Q8TDQ0 301 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 RELTQ969Z4 430 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 ZNF703Q9H7S9 590 aaPredicted RBP7.93□□□□□ -1.14
TDP1-210ENST00000554976 KLHL9Q9P2J3 617 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 ING1Q9UK53 422 aaPredicted RBP7.93□□□□□ -1.14
TDP1-210ENST00000554976 GSTK1Q9Y2Q3 226 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 COA3Q9Y2R0 106 aaPredicted RBP7.93□□□□□ -1.14
TDP1-210ENST00000554976 OTOGLQ3ZCN5 2332 aa7.93□□□□□ -1.14
TDP1-210ENST00000554976 OR4C45A6NMZ5 311 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 NPIPA5E9PKD4 350 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 DNPH1O43598 174 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 GPRIN2O60269 458 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 ZNF432O94892 652 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 ZFPL1O95159 310 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 OPN1LWP04000 364 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 HPNP05981 417 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 OR8G3PP0DMU2 310 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 CYB561P49447 251 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 BIDP55957 195 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 MXD1Q05195 221 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 SLC3A1Q07837 685 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 TMEM176BQ3YBM2 270 aaPredicted RBP7.92□□□□□ -1.14
TDP1-210ENST00000554976 ACSM3Q53FZ2 586 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 ZMAT1Q5H9K5 638 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 SPINK14Q6IE38 97 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 TMPRSS7Q7RTY8 843 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 LYSMD2Q8IV50 215 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 ZIC4Q8N9L1 334 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 SNX33Q8WV41 574 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 UQCC2Q9BRT2 126 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 DAPK2Q9UIK4 370 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 FOXD3Q9UJU5 478 aaPredicted RBP7.92□□□□□ -1.14
TDP1-210ENST00000554976 NPIPA1Q9UND3 350 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 CMAHPQ9Y471 501 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 NCOR1O75376 2440 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 FREM3P0C091 2139 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 TRBV5-7A0A0A0MS05 114 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 ZNF593O00488 134 aaPredicted RBP7.92□□□□□ -1.14
TDP1-210ENST00000554976 OR6A2O95222 327 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 P04436 131 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 TFPIP10646 304 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 CFPP27918 469 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 OR2B6P58173 313 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 RIN1Q13671 783 aa7.92□□□□□ -1.14
TDP1-210ENST00000554976 ALKBH1Q13686 389 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms