RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 MCHR1Q99705 422 aa14.22□□□□□ -0.13
SYNE3-203ENST00000554873 ZNF426Q9BUY5 554 aa14.22□□□□□ -0.13
SYNE3-203ENST00000554873 NRSN2Q9GZP1 204 aa14.22□□□□□ -0.13
SYNE3-203ENST00000554873 OR52D1Q9H346 318 aa14.22□□□□□ -0.13
SYNE3-203ENST00000554873 FN3KRPQ9HA64 309 aa14.22□□□□□ -0.13
SYNE3-203ENST00000554873 CES1P1Q9UKY3 287 aa14.22□□□□□ -0.13
SYNE3-203ENST00000554873 TBC1D3DA0A087WVF3 549 aa14.22□□□□□ -0.13
SYNE3-203ENST00000554873 TBC1D3IA0A087WXS9 549 aa14.22□□□□□ -0.13
SYNE3-203ENST00000554873 TBC1D3EA0A087X179 549 aa14.22□□□□□ -0.13
SYNE3-203ENST00000554873 TBC1D3KA0A087X1G2 549 aa14.22□□□□□ -0.13
SYNE3-203ENST00000554873 TBC1D3FA6NER0 549 aaPredicted RBP14.22□□□□□ -0.13
SYNE3-203ENST00000554873 TBC1D3LB9A6J9 549 aa14.22□□□□□ -0.13
SYNE3-203ENST00000554873 SMAD9O15198 467 aaKnown RBP14.22□□□□□ -0.13
SYNE3-203ENST00000554873 ITGA5P08648 1049 aa14.22□□□□□ -0.13
SYNE3-203ENST00000554873 NME2P22392 152 aa14.22□□□□□ -0.13
SYNE3-203ENST00000554873 HIST1H1TP22492 207 aaPredicted RBP14.22□□□□□ -0.13
SYNE3-203ENST00000554873 LSM6P62312 80 aaKnown RBP14.22□□□□□ -0.13
SYNE3-203ENST00000554873 DHRS2Q13268 280 aa14.22□□□□□ -0.13
SYNE3-203ENST00000554873 ZIC1Q15915 447 aa14.22□□□□□ -0.13
SYNE3-203ENST00000554873 ALG11Q2TAA5 492 aa14.22□□□□□ -0.13
SYNE3-203ENST00000554873 HNRNPA1L2Q32P51 320 aaKnown RBP14.22□□□□□ -0.13
SYNE3-203ENST00000554873 TMEM35AQ53FP2 167 aa14.22□□□□□ -0.13
SYNE3-203ENST00000554873 PRAMEF17Q5VTA0 474 aa14.22□□□□□ -0.13
SYNE3-203ENST00000554873 MRM1Q6IN84 353 aaKnown RBP14.22□□□□□ -0.13
SYNE3-203ENST00000554873 TBC1D3CQ6IPX1 549 aa14.22□□□□□ -0.13
SYNE3-203ENST00000554873 TBC1D3Q8IZP1 549 aaPredicted RBP14.22□□□□□ -0.13
SYNE3-203ENST00000554873 OR1J2Q8NGS2 313 aa14.22□□□□□ -0.13
SYNE3-203ENST00000554873 MS4A6EQ96DS6 147 aa14.22□□□□□ -0.13
SYNE3-203ENST00000554873 SLC41A3Q96GZ6 507 aa14.22□□□□□ -0.13
SYNE3-203ENST00000554873 PDCD1LG2Q9BQ51 273 aa14.22□□□□□ -0.13
SYNE3-203ENST00000554873 SLC25A21Q9BQT8 299 aaPredicted RBP14.22□□□□□ -0.13
SYNE3-203ENST00000554873 ACTRT3Q9BYD9 372 aa14.22□□□□□ -0.13
SYNE3-203ENST00000554873 SYNPO2LQ9H987 977 aa14.22□□□□□ -0.13
SYNE3-203ENST00000554873 FAM86C1Q9NVL1 165 aa14.22□□□□□ -0.13
SYNE3-203ENST00000554873 WIF1Q9Y5W5 379 aa14.22□□□□□ -0.13
SYNE3-203ENST00000554873 POMT1Q9Y6A1 747 aa14.22□□□□□ -0.13
SYNE3-203ENST00000554873 BHLHE40O14503 412 aa14.21□□□□□ -0.13
SYNE3-203ENST00000554873 CD3DP04234 171 aa14.21□□□□□ -0.13
SYNE3-203ENST00000554873 HEXBP07686 556 aa14.21□□□□□ -0.13
SYNE3-203ENST00000554873 FCGR3AP08637 254 aa14.21□□□□□ -0.13
SYNE3-203ENST00000554873 ADH5P11766 374 aa14.21□□□□□ -0.13
SYNE3-203ENST00000554873 CSNK2A2P19784 350 aaPredicted RBP14.21□□□□□ -0.13
SYNE3-203ENST00000554873 DVL1P1P54792 670 aaPredicted RBP14.21□□□□□ -0.13
SYNE3-203ENST00000554873 USF2Q15853 346 aaPredicted RBP14.21□□□□□ -0.13
SYNE3-203ENST00000554873 STEAP1BQ6NZ63 245 aa14.21□□□□□ -0.13
SYNE3-203ENST00000554873 PAPD4Q6PIY7 484 aaKnown RBP14.21□□□□□ -0.13
SYNE3-203ENST00000554873 ETFBKMTQ8IXQ9 262 aa14.21□□□□□ -0.13
SYNE3-203ENST00000554873 GALNT16Q8N428 558 aa14.21□□□□□ -0.13
SYNE3-203ENST00000554873 OR9A2Q8NGT5 310 aa14.21□□□□□ -0.13
SYNE3-203ENST00000554873 SLC2A12Q8TD20 617 aa14.21□□□□□ -0.13
SYNE3-203ENST00000554873 DEFB118Q96PH6 123 aa14.21□□□□□ -0.13
SYNE3-203ENST00000554873 CYTL1Q9NRR1 136 aa14.21□□□□□ -0.13
SYNE3-203ENST00000554873 GDF2Q9UK05 429 aaPredicted RBP14.21□□□□□ -0.13
SYNE3-203ENST00000554873 A0A0B4J2A0 478 aa14.21□□□□□ -0.14
SYNE3-203ENST00000554873 MAGEB4O15481 346 aaPredicted RBP14.21□□□□□ -0.14
SYNE3-203ENST00000554873 MBP02144 154 aa14.21□□□□□ -0.14
SYNE3-203ENST00000554873 PCCBP05166 539 aa14.21□□□□□ -0.14
SYNE3-203ENST00000554873 HLA-GP17693 338 aa14.21□□□□□ -0.14
SYNE3-203ENST00000554873 EDNRAP25101 427 aa14.21□□□□□ -0.14
SYNE3-203ENST00000554873 PDX1P52945 283 aa14.21□□□□□ -0.14
SYNE3-203ENST00000554873 MLF2Q15773 248 aaPredicted RBP14.21□□□□□ -0.14
SYNE3-203ENST00000554873 ABHD17CQ6PCB6 329 aa14.21□□□□□ -0.14
SYNE3-203ENST00000554873 SLC39A5Q6ZMH5 540 aa14.21□□□□□ -0.14
SYNE3-203ENST00000554873 SFTPA1Q8IWL2 248 aa14.21□□□□□ -0.14
SYNE3-203ENST00000554873 DND1Q8IYX4 353 aaKnown RBP14.21□□□□□ -0.14
SYNE3-203ENST00000554873 SYS1Q8N2H4 156 aa14.21□□□□□ -0.14
SYNE3-203ENST00000554873 CXorf40AQ8TE69 158 aa14.21□□□□□ -0.14
SYNE3-203ENST00000554873 WFIKKN2Q8TEU8 576 aa14.21□□□□□ -0.14
SYNE3-203ENST00000554873 SLC35A4Q96G79 324 aa14.21□□□□□ -0.14
SYNE3-203ENST00000554873 TCTN2Q96GX1 697 aa14.21□□□□□ -0.14
SYNE3-203ENST00000554873 IP6K3Q96PC2 410 aa14.21□□□□□ -0.14
SYNE3-203ENST00000554873 TTTY10Q9BZA0 68 aa14.21□□□□□ -0.14
SYNE3-203ENST00000554873 PRO1933Q9H354 126 aa14.21□□□□□ -0.14
SYNE3-203ENST00000554873 SHPKQ9UHJ6 478 aa14.21□□□□□ -0.14
SYNE3-203ENST00000554873 GPRIN2O60269 458 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 SLC35G4P0C7Q5 338 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 IL9P15248 144 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 MAS1LP35410 378 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 SLC26A5P58743 744 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 ACTA2P62736 377 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 ACTG2P63267 376 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 CDK3Q00526 305 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 ADAMTSL4Q6UY14 1074 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 ZBTB8AQ96BR9 441 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 MOAP1Q96BY2 351 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 TGM7Q96PF1 710 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 OR5B2Q96R09 309 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 INSM2Q96T92 566 aaPredicted RBP14.2□□□□□ -0.14
SYNE3-203ENST00000554873 LMAN2LQ9H0V9 348 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 ATG5Q9H1Y0 275 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 CMC2Q9NRP2 79 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 CREBZFQ9NS37 354 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 KLHL28Q9NXS3 571 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 HAO2Q9NYQ3 351 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 FBXO4Q9UKT5 387 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 KCNIP3Q9Y2W7 256 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 FAM221BA6H8Z2 402 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 OR52A4PA6NMU1 304 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 SEC14L6B5MCN3 397 aa14.2□□□□□ -0.14
SYNE3-203ENST00000554873 F10P00742 488 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms