RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 OR10G9Q8NGN4 311 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 OR10R2Q8NGX6 335 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 MCOLN3Q8TDD5 553 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 SERPINB12Q96P63 405 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 OSBPL10Q9BXB5 764 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 CCNB1IP1Q9NPC3 277 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 ZNF331Q9NQX6 463 aaPredicted RBP2.06□□□□□ -2.08
SCFD1-213ENST00000554776 PDP1Q9P0J1 537 aaPredicted RBP2.06□□□□□ -2.08
SCFD1-213ENST00000554776 UXTQ9UBK9 157 aaPredicted RBP2.06□□□□□ -2.08
SCFD1-213ENST00000554776 DUX4Q9UBX2 424 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 GOLT1BQ9Y3E0 138 aa2.06□□□□□ -2.08
SCFD1-213ENST00000554776 WI2-2373I1.2A0A1W2PRP0 233 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 NCF1BA6NI72 391 aaPredicted RBP2.05□□□□□ -2.08
SCFD1-213ENST00000554776 LRRIQ4A6NIV6 560 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 NCF1CA8MVU1 366 aaPredicted RBP2.05□□□□□ -2.08
SCFD1-213ENST00000554776 LAD1O00515 517 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 PEX7O00628 323 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 MRPS12O15235 138 aaKnown RBP2.05□□□□□ -2.08
SCFD1-213ENST00000554776 RTL8CO15255 209 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 CD5LO43866 347 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 CTAG2O75638 210 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 IGLV2-23P01705 113 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 PCCAP05165 728 aaPredicted RBP2.05□□□□□ -2.08
SCFD1-213ENST00000554776 ERCC1P07992 297 aaPredicted RBP2.05□□□□□ -2.08
SCFD1-213ENST00000554776 GNAO1P09471 354 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 MYL2P10916 166 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 EIF2S2P20042 333 aaKnown RBP2.05□□□□□ -2.08
SCFD1-213ENST00000554776 GSTM3P21266 225 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 HRH1P35367 487 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 MAS1LP35410 378 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 CXCL5P42830 114 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 SLC1A2P43004 574 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 SLC1A1P43005 524 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 NAMPTP43490 491 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 RPS5P46782 204 aaKnown RBP2.05□□□□□ -2.08
SCFD1-213ENST00000554776 SSR4P51571 173 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 RND2P52198 227 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 EIF3EP60228 445 aaKnown RBP2.05□□□□□ -2.08
SCFD1-213ENST00000554776 IRF8Q02556 426 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 TWF1Q12792 350 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 SMARCB1Q12824 385 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 CLINT1Q14677 625 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 PON3Q15166 354 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 TMEM183BQ1AE95 376 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 C12orf54Q6X4T0 127 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 MBOAT1Q6ZNC8 495 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 BIVMQ86UB2 503 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 ZNF429Q86V71 674 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 TMEM183AQ8IXX5 376 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 MREGQ8N565 214 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 OR6X1Q8NH79 312 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 LYPD6BQ8NI32 183 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 ACTRT1Q8TDG2 376 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 FAM3DQ96BQ1 224 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 PIK3IP1Q96FE7 263 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 SLC35E1Q96K37 410 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 TGS1Q96RS0 853 aaKnown RBP2.05□□□□□ -2.08
SCFD1-213ENST00000554776 P2RX4Q99571 388 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 PLA2G2FQ9BZM2 168 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 AGPAT4Q9NRZ5 378 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 NUFIP1Q9UHK0 495 aaKnown RBP2.05□□□□□ -2.08
SCFD1-213ENST00000554776 TBC1D24Q9ULP9 559 aa2.05□□□□□ -2.08
SCFD1-213ENST00000554776 TRBV6-6A0A0A6YYG2 114 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 SUPT3HB4E1H0 165 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 SIRPB1O00241 398 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 XKRYO14609 159 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 CASQ2O14958 399 aaPredicted RBP2.04□□□□□ -2.08
SCFD1-213ENST00000554776 NUPL2O15504 423 aaKnown RBP2.04□□□□□ -2.08
SCFD1-213ENST00000554776 CHST1O43916 411 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 EIF4E2O60573 245 aaKnown RBP2.04□□□□□ -2.08
SCFD1-213ENST00000554776 HUS1O60921 280 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 SS18L1O75177 396 aaPredicted RBP2.04□□□□□ -2.08
SCFD1-213ENST00000554776 CA11O75493 328 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 SRP72O76094 671 aaKnown RBP2.04□□□□□ -2.08
SCFD1-213ENST00000554776 SLC25A27O95847 323 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 C6orf47O95873 294 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 BGLAPP02818 100 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 TUBG1P23258 451 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 TNNT2P45379 298 aaPredicted RBP2.04□□□□□ -2.08
SCFD1-213ENST00000554776 CSNK1DP48730 415 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 CX3CR1P49238 355 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 CSNK1EP49674 416 aaKnown RBP2.04□□□□□ -2.08
SCFD1-213ENST00000554776 ZNF136P52737 540 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 RAB10P61026 200 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 UBE2MP61081 183 aaKnown RBP2.04□□□□□ -2.08
SCFD1-213ENST00000554776 SLC7A9P82251 487 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 MXD1Q05195 221 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 GGTLC2Q14390 218 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 TTLL9Q3SXZ7 439 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 CCNJQ5T5M9 372 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 CYB5R2Q6BCY4 276 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 TWF2Q6IBS0 349 aaKnown RBP2.04□□□□□ -2.08
SCFD1-213ENST00000554776 ZNF530Q6P9A1 599 aaPredicted RBP2.04□□□□□ -2.08
SCFD1-213ENST00000554776 IGFL2Q6UWQ7 119 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 ZNF493Q6ZR52 646 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 TMEM179Q6ZVK1 233 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 TMEM135Q86UB9 458 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 OAFQ86UD1 273 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 MKXQ8IYA7 352 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 KATNAL2Q8IYT4 538 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms