RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 OR11A1Q9GZK7 315 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 UBTD1Q9HAC8 227 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 BCO1Q9HAY6 547 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 MEPEQ9NQ76 525 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-214ENST00000554604 C20orf141Q9NUB4 165 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 TAS2R16Q9NYV7 291 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 EMC3Q9P0I2 261 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 RPS6KB2Q9UBS0 482 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 BAIAP2Q9UQB8 552 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 SIGLEC7Q9Y286 467 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 EXOSC1Q9Y3B2 195 aaKnown RBP10.99□□□□□ -0.65
SHMT2-214ENST00000554604 TMED7Q9Y3B3 224 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 HDGFL3Q9Y3E1 203 aa10.99□□□□□ -0.65
SHMT2-214ENST00000554604 CCRL2O00421 344 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 BHLHE40O14503 412 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 MYL12BO14950 172 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 PTP4A3O75365 173 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 PMS2P2O95744 297 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 IGF2P01344 180 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 SCG5P05408 212 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 THBDP07204 575 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 SLC1A3P43003 542 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 MTNR1AP48039 350 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 ENTPD1P49961 510 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 OR2B6P58173 313 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 FXYD6P3P58550 94 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 COPZ1P61923 177 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 NCS1P62166 190 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 MLLT11Q13015 90 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-214ENST00000554604 TMED1Q13445 227 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 C1DQ13901 141 aaKnown RBP10.98□□□□□ -0.65
SHMT2-214ENST00000554604 P2RY6Q15077 328 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 SPHARQ15513 63 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 ZNF829Q3KNS6 432 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-214ENST00000554604 BEX5Q5H9J7 111 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 SMARCD3Q6STE5 483 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 USP43Q70EL4 1123 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 ADGRG3Q86Y34 549 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 GID4Q8IVV7 300 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 ZNF100Q8IYN0 542 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 GABRG1Q8N1C3 465 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 NDNFQ8TB73 568 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 RNF217Q8TC41 542 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 RPL3LQ92901 407 aaKnown RBP10.98□□□□□ -0.65
SHMT2-214ENST00000554604 KISS1RQ969F8 398 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-214ENST00000554604 S100PBPQ96BU1 408 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 DDIT4LQ96D03 193 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 RNFT2Q96EX2 444 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 ARL5BQ96KC2 179 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 OPALINQ96PE5 141 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 SH3GL3Q99963 347 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 JAM3Q9BX67 310 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 SLC19A3Q9BZV2 496 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 OR10A4Q9H209 315 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 ISYNA1Q9NPH2 558 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 OSGIN1Q9UJX0 560 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 EXOGQ9Y2C4 368 aaKnown RBP10.98□□□□□ -0.65
SHMT2-214ENST00000554604 USF3Q68DE3 2245 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 PLCE1Q9P212 2302 aa10.98□□□□□ -0.65
SHMT2-214ENST00000554604 RAI1Q7Z5J4 1906 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-214ENST00000554604 A0A087WUJ7 227 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-214ENST00000554604 TMEM129A0AVI4 362 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 ZNF724A8MTY0 619 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 DNPH1O43598 174 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 CD99P14209 185 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 MYL12AP19105 171 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 CD53P19397 219 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 KLK2P20151 261 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 CXCR1P25024 350 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 TACR3P29371 465 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 HTR1FP30939 366 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 OR3A2P47893 321 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 SLC9A3P48764 834 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 MAP2K6P52564 334 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 CDH11P55287 796 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 LSM3P62310 102 aaKnown RBP10.97□□□□□ -0.65
SHMT2-214ENST00000554604 ITGADQ13349 1161 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 TSC22D1Q15714 1073 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 TSTQ16762 297 aaKnown RBP10.97□□□□□ -0.65
SHMT2-214ENST00000554604 ARMC4Q5T2S8 1044 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 SFRP5Q5T4F7 317 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 GDPGP1Q6ZNW5 385 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 Q6ZT83 130 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 TGIF2LYQ8IUE0 185 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 CADM2Q8N3J6 435 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 KBTBD8Q8NFY9 601 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 OR13C2Q8NGS9 318 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 BORCS5Q969J3 196 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 PIGTQ969N2 578 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 HS3ST6Q96QI5 342 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 DCSTAMPQ9H295 470 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 PALMDQ9NP74 551 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 NGBQ9NPG2 151 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 BEX4Q9NWD9 120 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-214ENST00000554604 CHCHD3Q9NX63 227 aaKnown RBP10.97□□□□□ -0.65
SHMT2-214ENST00000554604 H2AFY2Q9P0M6 372 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-214ENST00000554604 ING1Q9UK53 422 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-214ENST00000554604 TRAPPC4Q9Y296 219 aa10.97□□□□□ -0.65
SHMT2-214ENST00000554604 A3GALT2U3KPV4 340 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms