RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 MRPL39Q9NYK5 338 aaKnown RBP5.59□□□□□ -1.51
SCFD1-212ENST00000554486 SEC14L4Q9UDX3 406 aa5.59□□□□□ -1.51
SCFD1-212ENST00000554486 TRAPPC4Q9Y296 219 aa5.59□□□□□ -1.51
SCFD1-212ENST00000554486 FREM1Q5H8C1 2179 aa5.59□□□□□ -1.52
SCFD1-212ENST00000554486 PHF3Q92576 2039 aaKnown RBP5.58□□□□□ -1.52
SCFD1-212ENST00000554486 INTS1Q8N201 2190 aaKnown RBP5.58□□□□□ -1.52
SCFD1-212ENST00000554486 TRAV27A0A087WT01 109 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 GJE1A6NN92 205 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 KDM4EB2RXH2 506 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-212ENST00000554486 NPIPA2E9PIF3 369 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 E9PQ18 207 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 NPIPA3F8WFD2 350 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 SULT2B1O00204 365 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 PLPP3O14495 311 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 DNPH1O43598 174 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 CXCL13O43927 109 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 RAMP1O60894 148 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 AKR7A3O95154 331 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 SOX14O95416 240 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 HPRP00739 348 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 MT-ATP6P00846 226 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 SAGP10523 405 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-212ENST00000554486 IGFBP5P24593 272 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 EPHA2P29317 976 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 GRPRP30550 384 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 POLR2IP36954 125 aaKnown RBP5.58□□□□□ -1.52
SCFD1-212ENST00000554486 AQP2P41181 271 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 SLC9A3P48764 834 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 ALDH3A2P51648 485 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 MLLT10P55197 1068 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 RPS4XP62701 263 aaKnown RBP5.58□□□□□ -1.52
SCFD1-212ENST00000554486 SLC35A1P78382 337 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 H3F3AP84243 136 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 COX10Q12887 443 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 MFSD13AQ14CX5 517 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 ZNF239Q16600 458 aaKnown RBP5.58□□□□□ -1.52
SCFD1-212ENST00000554486 ZBED5Q49AG3 693 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 ZNF362Q5T0B9 420 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-212ENST00000554486 ARHGAP11AQ6P4F7 1023 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 MYO7BQ6PIF6 2116 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 PAQR6Q6TCH4 344 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 PLXDC2Q6UX71 529 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 NHLRC1Q6VVB1 395 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 ZNF620Q6ZNG0 422 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 RASSF6Q6ZTQ3 369 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 GALNT5Q7Z7M9 940 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 OAFQ86UD1 273 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 CDK20Q8IZL9 346 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 PARP8Q8N3A8 854 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 CLDN22Q8N7P3 220 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 TMEM99Q8N816 258 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 C11orf44Q8N8P7 122 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 LRRC75AQ8NAA5 344 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 LSM14AQ8ND56 463 aaKnown RBP5.58□□□□□ -1.52
SCFD1-212ENST00000554486 ADPRHL1Q8NDY3 354 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 OR8D4Q8NGM9 314 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 OR5M9Q8NGP3 310 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 OR5J2Q8NH18 312 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 OR51A7Q8NH64 312 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 MOSPD2Q8NHP6 518 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 MAGEE2Q8TD90 523 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-212ENST00000554486 DNAJC9Q8WXX5 260 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 SARAFQ96BY9 339 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 SDCCAG3Q96C92 435 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 ZNF845Q96IR2 970 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-212ENST00000554486 HIST1H2AAQ96QV6 131 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 TNFRSF13CQ96RJ3 184 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 PRR25Q96S07 402 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 MBOAT4Q96T53 435 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 TUBA1CQ9BQE3 449 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 PLA2G12AQ9BZM1 189 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 PRDM13Q9H4Q3 707 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 EGLN3Q9H6Z9 239 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 ZNF556Q9HAH1 456 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 CHST11Q9NPF2 352 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 KRCC1Q9NPI7 259 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-212ENST00000554486 NANSQ9NR45 359 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 PAPOLBQ9NRJ5 636 aaKnown RBP5.58□□□□□ -1.52
SCFD1-212ENST00000554486 KRT84Q9NSB2 600 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 ALKBH4Q9NXW9 302 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 TAS2R5Q9NYW4 299 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 KIF17Q9P2E2 1029 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 ZNF229Q9UJW7 825 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 CAMK2AQ9UQM7 478 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 SIGLEC7Q9Y286 467 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 POFUT2Q9Y2G5 429 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 CDH10Q9Y6N8 788 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 SMG1Q96Q15 3661 aaKnown RBP5.58□□□□□ -1.52
SCFD1-212ENST00000554486 FAM208BQ5VWN6 2430 aa5.58□□□□□ -1.52
SCFD1-212ENST00000554486 ESPL1Q14674 2120 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 IGHV3-15A0A0B4J1V0 119 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 MS4A18H0YCH9 400 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 H0YIZ8 118 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 BLOC1S5-TXNDC5H3BN57 136 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 BCKDKO14874 412 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 SMAD9O15198 467 aaKnown RBP5.57□□□□□ -1.52
SCFD1-212ENST00000554486 SPRY2O43597 315 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 SNAP29O95721 258 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 NUDT3O95989 172 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 HIST1H2ABP04908 130 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms