RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 SLC25A40Q8TBP6 338 aa7.55□□□□□ -1.2
PRKCH-208ENST00000553846 SSMEM1Q8WWF3 244 aa7.55□□□□□ -1.2
PRKCH-208ENST00000553846 RAB40AQ8WXH6 277 aa7.55□□□□□ -1.2
PRKCH-208ENST00000553846 NABP1Q96AH0 204 aa7.55□□□□□ -1.2
PRKCH-208ENST00000553846 VPS33AQ96AX1 596 aa7.55□□□□□ -1.2
PRKCH-208ENST00000553846 NMD3Q96D46 503 aaKnown RBP7.55□□□□□ -1.2
PRKCH-208ENST00000553846 TMEM19Q96HH6 336 aa7.55□□□□□ -1.2
PRKCH-208ENST00000553846 APOPT1Q96IL0 206 aa7.55□□□□□ -1.2
PRKCH-208ENST00000553846 DCLRE1CQ96SD1 692 aaKnown RBP7.55□□□□□ -1.2
PRKCH-208ENST00000553846 WFDC6Q9BQY6 131 aa7.55□□□□□ -1.2
PRKCH-208ENST00000553846 SSBP3Q9BWW4 388 aaPredicted RBP7.55□□□□□ -1.2
PRKCH-208ENST00000553846 MRPL13Q9BYD1 178 aaKnown RBP7.55□□□□□ -1.2
PRKCH-208ENST00000553846 OR2J1Q9GZK6 312 aa7.55□□□□□ -1.2
PRKCH-208ENST00000553846 BCL2L10Q9HD36 194 aa7.55□□□□□ -1.2
PRKCH-208ENST00000553846 TNFRSF19Q9NS68 423 aa7.55□□□□□ -1.2
PRKCH-208ENST00000553846 CYSLTR2Q9NS75 346 aa7.55□□□□□ -1.2
PRKCH-208ENST00000553846 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.55□□□□□ -1.2
PRKCH-208ENST00000553846 UGT2A1Q9Y4X1 527 aa7.55□□□□□ -1.2
PRKCH-208ENST00000553846 A0A0B4J2E0 115 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 A0A0G2JPF8 293 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 A0A1B0GX12 115 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 PLSCR5A0PG75 271 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 HNRNPCL2B2RXH8 293 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 HNRNPCL3B7ZW38 293 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 C22orf46C9J442 243 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 TMEM178BH3BS89 294 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 HNRNPCL1O60812 293 aaKnown RBP7.54□□□□□ -1.2
PRKCH-208ENST00000553846 TGDSO95455 350 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 FSTL3O95633 263 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 IGHV4-59P01825 116 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 CRYBA1P05813 215 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 MYZAPP0CAP1 466 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 HNRNPCL4P0DMR1 293 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 BMP2P12643 396 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 NQO1P15559 274 aaKnown RBP7.54□□□□□ -1.2
PRKCH-208ENST00000553846 HOXB9P17482 250 aaPredicted RBP7.54□□□□□ -1.2
PRKCH-208ENST00000553846 LIPAP38571 399 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 ANXA11P50995 505 aaKnown RBP7.54□□□□□ -1.2
PRKCH-208ENST00000553846 MMP16P51512 607 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 CLNS1AP54105 237 aaKnown RBP7.54□□□□□ -1.2
PRKCH-208ENST00000553846 CRISP3P54108 245 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 LOXL3P58215 753 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 TNFAIP6P98066 277 aaPredicted RBP7.54□□□□□ -1.2
PRKCH-208ENST00000553846 FAM189A2Q15884 450 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 ZNF718Q3SXZ3 478 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 SLC36A2Q495M3 483 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 ALG10BQ5I7T1 473 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 PABPC1L2AQ5JQF8 200 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 FAM91A1Q658Y4 838 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 C11orf87Q6NUJ2 197 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 TMEM53Q6P2H8 277 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 KLBQ86Z14 1044 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 MIER2Q8N344 545 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 C17orf53Q8N3J3 647 aaPredicted RBP7.54□□□□□ -1.2
PRKCH-208ENST00000553846 ICA1LQ8NDH6 482 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 VPS37AQ8NEZ2 397 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 OR1J2Q8NGS2 313 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 MRAPQ8TCY5 172 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 DNAJA4Q8WW22 397 aaPredicted RBP7.54□□□□□ -1.2
PRKCH-208ENST00000553846 FAM71F1Q96KD3 344 aaPredicted RBP7.54□□□□□ -1.2
PRKCH-208ENST00000553846 SAMD8Q96LT4 415 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 PANX1Q96RD7 426 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 CDADC1Q9BWV3 514 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 TMEM165Q9HC07 324 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.54□□□□□ -1.2
PRKCH-208ENST00000553846 AURKAIP1Q9NWT8 199 aaPredicted RBP7.54□□□□□ -1.2
PRKCH-208ENST00000553846 TAS2R5Q9NYW4 299 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 CALML5Q9NZT1 146 aa7.54□□□□□ -1.2
PRKCH-208ENST00000553846 ZNF726A6NNF4 738 aa7.53□□□□□ -1.2
PRKCH-208ENST00000553846 ITM2AO43736 263 aa7.53□□□□□ -1.2
PRKCH-208ENST00000553846 ENTPD5O75356 428 aa7.53□□□□□ -1.2
PRKCH-208ENST00000553846 TSPAN9O75954 239 aa7.53□□□□□ -1.2
PRKCH-208ENST00000553846 LYPD3O95274 346 aa7.53□□□□□ -1.2
PRKCH-208ENST00000553846 PTHP01270 115 aa7.53□□□□□ -1.2
PRKCH-208ENST00000553846 SFTPBP07988 381 aa7.53□□□□□ -1.2
PRKCH-208ENST00000553846 CSF1P09603 554 aa7.53□□□□□ -1.2
PRKCH-208ENST00000553846 STOMP27105 288 aa7.53□□□□□ -1.2
PRKCH-208ENST00000553846 S100A3P33764 101 aa7.53□□□□□ -1.2
PRKCH-208ENST00000553846 ETV4P43268 484 aa7.53□□□□□ -1.2
PRKCH-208ENST00000553846 IER3P46695 156 aa7.53□□□□□ -1.2
PRKCH-208ENST00000553846 FGF12P61328 243 aa7.53□□□□□ -1.2
PRKCH-208ENST00000553846 UFM1P61960 85 aa7.53□□□□□ -1.2
PRKCH-208ENST00000553846 PSG7Q13046 419 aa7.53□□□□□ -1.2
PRKCH-208ENST00000553846 GTDC1Q4AE62 458 aa7.53□□□□□ -1.2
PRKCH-208ENST00000553846 MTX3Q5HYI7 312 aa7.53□□□□□ -1.2
PRKCH-208ENST00000553846 C10orf128Q5T292 105 aa7.53□□□□□ -1.2
PRKCH-208ENST00000553846 OGFOD2Q6N063 350 aa7.53□□□□□ -1.2
PRKCH-208ENST00000553846 BTNL3Q6UXE8 466 aa7.53□□□□□ -1.2
PRKCH-208ENST00000553846 LINC00114Q6XXX2 140 aa7.53□□□□□ -1.2
PRKCH-208ENST00000553846 ZNF841Q6ZN19 808 aa7.53□□□□□ -1.2
PRKCH-208ENST00000553846 SLC35D2Q76EJ3 337 aa7.53□□□□□ -1.2
PRKCH-208ENST00000553846 SLC16A14Q7RTX9 510 aa7.53□□□□□ -1.2
PRKCH-208ENST00000553846 TRIML2Q8N7C3 387 aa7.53□□□□□ -1.2
PRKCH-208ENST00000553846 RBM15BQ8NDT2 890 aaKnown RBP7.53□□□□□ -1.2
PRKCH-208ENST00000553846 OR5J2Q8NH18 312 aa7.53□□□□□ -1.2
PRKCH-208ENST00000553846 EPS8L3Q8TE67 593 aaKnown RBP7.53□□□□□ -1.2
PRKCH-208ENST00000553846 ZDHHC16Q969W1 377 aa7.53□□□□□ -1.2
PRKCH-208ENST00000553846 ZNF566Q969W8 418 aa7.53□□□□□ -1.2
PRKCH-208ENST00000553846 THOC1Q96FV9 657 aaKnown RBP7.53□□□□□ -1.2
PRKCH-208ENST00000553846 SLC25A44Q96H78 314 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms