RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 XKRYO14609 159 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 B4GALT5O43286 388 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 IGKV1-17P01599 117 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 ZNF286BP0CG31 522 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 U2AF2P26368 475 aaKnown RBP eCLIP1.74□□□□□ -2.13
VRK1-202ENST00000553683 CCT6AP40227 531 aaKnown RBP1.74□□□□□ -2.13
VRK1-202ENST00000553683 UBE2AP49459 152 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 TSPAN5P62079 268 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 ACTA2P62736 377 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 ERVK-25P63136 954 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 ACTC1P68032 377 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 XRCC4Q13426 336 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 ALX1Q15699 326 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 SGCAQ16586 387 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 RSPO1Q2MKA7 263 aaPredicted RBP1.74□□□□□ -2.13
VRK1-202ENST00000553683 CCDC153Q494R4 210 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 ABCA11PQ4W5N1 156 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 LY6G6FQ5SQ64 297 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 RIPPLY2Q5TAB7 128 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 OR52E8Q6IFG1 317 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 PYHIN1Q6K0P9 492 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 NANOGP8Q6NSW7 305 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 ERICH5Q6P6B1 374 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 SLC51BQ86UW2 128 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 LRRC6Q86X45 466 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 SLC35F2Q8IXU6 374 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 KIR2DL5AQ8N109 375 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 BBS5Q8N3I7 341 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 ZCCHC7Q8N3Z6 543 aaKnown RBP1.74□□□□□ -2.13
VRK1-202ENST00000553683 LIX1Q8N485 282 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 TRPV1Q8NER1 839 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 OR8K1Q8NGG5 319 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 OR4D5Q8NGN0 318 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 CLHC1Q8NHS4 586 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 LZICQ8WZA0 190 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 OSTF1Q92882 214 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 FGF11Q92914 225 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 LRRC39Q96DD0 335 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 PELI1Q96FA3 418 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 CMTM7Q96FZ5 175 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 TGM7Q96PF1 710 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 NDFIP1Q9BT67 221 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 OSBPL11Q9BXB4 747 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 API5Q9BZZ5 524 aaKnown RBP1.74□□□□□ -2.13
VRK1-202ENST00000553683 RBKSQ9H477 322 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 RPP21Q9H633 154 aaKnown RBP1.74□□□□□ -2.13
VRK1-202ENST00000553683 NHEJ1Q9H9Q4 299 aaPredicted RBP1.74□□□□□ -2.13
VRK1-202ENST00000553683 ELOVL3Q9HB03 270 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 ZDHHC4Q9NPG8 344 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 C8orf4Q9NR00 106 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 CTPS2Q9NRF8 586 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 AGPAT3Q9NRZ7 376 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 XCL2Q9UBD3 114 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 PAIP2BQ9ULR5 123 aaKnown RBP1.74□□□□□ -2.13
VRK1-202ENST00000553683 TMCO1Q9UM00 188 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 HEBP2Q9Y5Z4 205 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 WDR62O43379 1518 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 PCM1Q15154 2024 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 GAPVD1Q14C86 1478 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 ABCC10Q5T3U5 1492 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 YEATS2Q9ULM3 1422 aa1.74□□□□□ -2.13
VRK1-202ENST00000553683 CACNA1GO43497 2377 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 CPDO75976 1380 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 ROCK1Q13464 1354 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 SCRIBQ14160 1630 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 NSG1A0A0A6YYJ2 146 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 PLAC8L1A1L4L8 177 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 MBLAC1A4D2B0 266 aaPredicted RBP1.73□□□□□ -2.13
VRK1-202ENST00000553683 LRP5LA4QPB2 252 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 GOLGA8IPA6NC78 632 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 GOLGA6L10A6NI86 522 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 GOLGA8JA6NMD2 632 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 IQCF5A8MTL0 148 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 GOLGA8TH3BQL2 631 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 RAD51BO15315 384 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 TBX19O60806 448 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 B4GALT2O60909 372 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 SURF6O75683 361 aaKnown RBP1.73□□□□□ -2.13
VRK1-202ENST00000553683 CRTAPO75718 401 aaPredicted RBP1.73□□□□□ -2.13
VRK1-202ENST00000553683 ATP5HO75947 161 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 DIRAS3O95661 229 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 SNRPAP09012 282 aaKnown RBP1.73□□□□□ -2.13
VRK1-202ENST00000553683 GOLGA8HP0CJ92 632 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 IGHV3-43DP0DP04 118 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 PRPS2P11908 318 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 CCDC130P13994 396 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 NCF1P14598 390 aaPredicted RBP1.73□□□□□ -2.13
VRK1-202ENST00000553683 MUC1P15941 1255 aaPredicted RBP1.73□□□□□ -2.13
VRK1-202ENST00000553683 PSMC3P17980 439 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 S100A1P23297 94 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 GCAP28676 217 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 CHI3L1P36222 383 aaPredicted RBP1.73□□□□□ -2.13
VRK1-202ENST00000553683 CDKN1BP46527 198 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 PRRX1P54821 245 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 S100A12P80511 92 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 C1orf61Q13536 156 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 DDX39BQ13838 428 aaKnown RBP1.73□□□□□ -2.13
VRK1-202ENST00000553683 DMC1Q14565 340 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 CASP8Q14790 479 aa1.73□□□□□ -2.13
VRK1-202ENST00000553683 OXA1LQ15070 435 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms