RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 DEFB113Q30KQ7 82 aa19.83■□□□□ 0.77
TDP1-206ENST00000553569 RASSF6Q6ZTQ3 369 aa19.83■□□□□ 0.77
TDP1-206ENST00000553569 JAZF1Q86VZ6 243 aa19.83■□□□□ 0.77
TDP1-206ENST00000553569 HS3ST5Q8IZT8 346 aa19.83■□□□□ 0.77
TDP1-206ENST00000553569 NABP1Q96AH0 204 aa19.83■□□□□ 0.77
TDP1-206ENST00000553569 MS4A3Q96HJ5 214 aa19.83■□□□□ 0.77
TDP1-206ENST00000553569 NIPSNAP1Q9BPW8 284 aa19.83■□□□□ 0.77
TDP1-206ENST00000553569 PLA2G12AQ9BZM1 189 aa19.83■□□□□ 0.77
TDP1-206ENST00000553569 RNF121Q9H920 327 aa19.83■□□□□ 0.77
TDP1-206ENST00000553569 PDP1Q9P0J1 537 aaPredicted RBP19.83■□□□□ 0.77
TDP1-206ENST00000553569 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.83■□□□□ 0.77
TDP1-206ENST00000553569 CCDC168Q8NDH2 2452 aa19.82■□□□□ 0.76
TDP1-206ENST00000553569 CREBBPQ92793 2442 aa19.82■□□□□ 0.76
TDP1-206ENST00000553569 IGFBP1P08833 259 aaPredicted RBP19.82■□□□□ 0.76
TDP1-206ENST00000553569 CTLA4P16410 223 aa19.82■□□□□ 0.76
TDP1-206ENST00000553569 GSTM3P21266 225 aa19.82■□□□□ 0.76
TDP1-206ENST00000553569 CALCRP30988 508 aa19.82■□□□□ 0.76
TDP1-206ENST00000553569 CDKN2AP42771 156 aaKnown RBP19.82■□□□□ 0.76
TDP1-206ENST00000553569 RAB39AQ14964 217 aa19.82■□□□□ 0.76
TDP1-206ENST00000553569 ETFDHQ16134 617 aa19.82■□□□□ 0.76
TDP1-206ENST00000553569 SLC36A2Q495M3 483 aa19.82■□□□□ 0.76
TDP1-206ENST00000553569 NRN1LQ496H8 165 aa19.82■□□□□ 0.76
TDP1-206ENST00000553569 RPL13AP3Q6NVV1 102 aa19.82■□□□□ 0.76
TDP1-206ENST00000553569 TMEM53Q6P2H8 277 aa19.82■□□□□ 0.76
TDP1-206ENST00000553569 OR8D4Q8NGM9 314 aa19.82■□□□□ 0.76
TDP1-206ENST00000553569 SMAP2Q8WU79 429 aaPredicted RBP19.82■□□□□ 0.76
TDP1-206ENST00000553569 PIGTQ969N2 578 aa19.82■□□□□ 0.76
TDP1-206ENST00000553569 MBD6Q96DN6 1003 aa19.82■□□□□ 0.76
TDP1-206ENST00000553569 FOXN4Q96NZ1 517 aa19.82■□□□□ 0.76
TDP1-206ENST00000553569 FEVQ99581 238 aa19.82■□□□□ 0.76
TDP1-206ENST00000553569 LAMP3Q9UQV4 416 aa19.82■□□□□ 0.76
TDP1-206ENST00000553569 ARPC3O15145 178 aa19.81■□□□□ 0.76
TDP1-206ENST00000553569 AHCYL1O43865 530 aa19.81■□□□□ 0.76
TDP1-206ENST00000553569 DEAF1O75398 565 aaPredicted RBP19.81■□□□□ 0.76
TDP1-206ENST00000553569 SOD3P08294 240 aa19.81■□□□□ 0.76
TDP1-206ENST00000553569 HIST1H1CP16403 213 aaKnown RBP19.81■□□□□ 0.76
TDP1-206ENST00000553569 NPR2P20594 1047 aa19.81■□□□□ 0.76
TDP1-206ENST00000553569 SLC35F1Q5T1Q4 408 aa19.81■□□□□ 0.76
TDP1-206ENST00000553569 LEG1Q6P5S2 330 aa19.81■□□□□ 0.76
TDP1-206ENST00000553569 OR4K13Q8NH42 304 aa19.81■□□□□ 0.76
TDP1-206ENST00000553569 TMEM171Q8WVE6 324 aa19.81■□□□□ 0.76
TDP1-206ENST00000553569 KCNN2Q9H2S1 579 aa19.81■□□□□ 0.76
TDP1-206ENST00000553569 SIAEQ9HAT2 523 aa19.81■□□□□ 0.76
TDP1-206ENST00000553569 ARMC1Q9NVT9 282 aa19.81■□□□□ 0.76
TDP1-206ENST00000553569 BEX4Q9NWD9 120 aaPredicted RBP19.81■□□□□ 0.76
TDP1-206ENST00000553569 VSX1Q9NZR4 365 aaPredicted RBP19.81■□□□□ 0.76
TDP1-206ENST00000553569 PLCE1Q9P212 2302 aa19.8■□□□□ 0.76
TDP1-206ENST00000553569 IGHV2OR16-5A0A0B4J2B6 119 aa19.8■□□□□ 0.76
TDP1-206ENST00000553569 ARRDC5A6NEK1 342 aa19.8■□□□□ 0.76
TDP1-206ENST00000553569 SLC16A7O60669 478 aa19.8■□□□□ 0.76
TDP1-206ENST00000553569 ZNF14P17017 642 aaPredicted RBP19.8■□□□□ 0.76
TDP1-206ENST00000553569 GUCA1AP43080 201 aaPredicted RBP19.8■□□□□ 0.76
TDP1-206ENST00000553569 PGGHGQ32M88 737 aa19.8■□□□□ 0.76
TDP1-206ENST00000553569 DPPA2Q7Z7J5 298 aa19.8■□□□□ 0.76
TDP1-206ENST00000553569 SDR9C7Q8NEX9 313 aa19.8■□□□□ 0.76
TDP1-206ENST00000553569 ZNF75AQ96N20 296 aa19.8■□□□□ 0.76
TDP1-206ENST00000553569 NMNAT3Q96T66 252 aa19.8■□□□□ 0.76
TDP1-206ENST00000553569 DHRS9Q9BPW9 319 aa19.8■□□□□ 0.76
TDP1-206ENST00000553569 TSSK6Q9BXA6 273 aa19.8■□□□□ 0.76
TDP1-206ENST00000553569 CCNB1IP1Q9NPC3 277 aa19.8■□□□□ 0.76
TDP1-206ENST00000553569 IL20Q9NYY1 176 aa19.8■□□□□ 0.76
TDP1-206ENST00000553569 AP4S1Q9Y587 144 aa19.8■□□□□ 0.76
TDP1-206ENST00000553569 MYO9AB2RTY4 2548 aa19.8■□□□□ 0.76
TDP1-206ENST00000553569 BHLHE40O14503 412 aa19.79■□□□□ 0.76
TDP1-206ENST00000553569 SMPD2O60906 423 aa19.79■□□□□ 0.76
TDP1-206ENST00000553569 KHDRBS3O75525 346 aaKnown RBP19.79■□□□□ 0.76
TDP1-206ENST00000553569 RENP00797 406 aa19.79■□□□□ 0.76
TDP1-206ENST00000553569 DANCRP0C864 163 aa19.79■□□□□ 0.76
TDP1-206ENST00000553569 LAP3P28838 519 aa19.79■□□□□ 0.76
TDP1-206ENST00000553569 FABP6P51161 128 aa19.79■□□□□ 0.76
TDP1-206ENST00000553569 FOXL2NBQ6ZUU3 175 aa19.79■□□□□ 0.76
TDP1-206ENST00000553569 TSSK2Q96PF2 358 aa19.79■□□□□ 0.76
TDP1-206ENST00000553569 FOXC2Q99958 501 aa19.79■□□□□ 0.76
TDP1-206ENST00000553569 NUAK2Q9H093 628 aa19.79■□□□□ 0.76
TDP1-206ENST00000553569 NTN4Q9HB63 628 aa19.79■□□□□ 0.76
TDP1-206ENST00000553569 EMC7Q9NPA0 242 aa19.79■□□□□ 0.76
TDP1-206ENST00000553569 FAIMQ9NVQ4 179 aa19.79■□□□□ 0.76
TDP1-206ENST00000553569 IDH3BO43837 385 aa19.78■□□□□ 0.76
TDP1-206ENST00000553569 MSR1P21757 451 aa19.78■□□□□ 0.76
TDP1-206ENST00000553569 PRKACGP22612 351 aa19.78■□□□□ 0.76
TDP1-206ENST00000553569 CENPAP49450 140 aa19.78■□□□□ 0.76
TDP1-206ENST00000553569 HSF2Q03933 536 aa19.78■□□□□ 0.76
TDP1-206ENST00000553569 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.78■□□□□ 0.76
TDP1-206ENST00000553569 DBPQ10586 325 aaPredicted RBP19.78■□□□□ 0.76
TDP1-206ENST00000553569 VHLLQ6RSH7 139 aa19.78■□□□□ 0.76
TDP1-206ENST00000553569 ZNF584Q8IVC4 421 aa19.78■□□□□ 0.76
TDP1-206ENST00000553569 FBXL14Q8N1E6 418 aa19.78■□□□□ 0.76
TDP1-206ENST00000553569 OR52E2Q8NGJ4 325 aa19.78■□□□□ 0.76
TDP1-206ENST00000553569 TEX47Q8TBZ9 253 aa19.78■□□□□ 0.76
TDP1-206ENST00000553569 FBXO17Q96EF6 278 aa19.78■□□□□ 0.76
TDP1-206ENST00000553569 FN3KQ9H479 309 aa19.78■□□□□ 0.76
TDP1-206ENST00000553569 CXorf56Q9H5V9 222 aa19.78■□□□□ 0.76
TDP1-206ENST00000553569 ZNF556Q9HAH1 456 aa19.78■□□□□ 0.76
TDP1-206ENST00000553569 POLE4Q9NR33 117 aa19.78■□□□□ 0.76
TDP1-206ENST00000553569 FBXL3Q9UKT7 428 aa19.78■□□□□ 0.76
TDP1-206ENST00000553569 COA3Q9Y2R0 106 aaPredicted RBP19.78■□□□□ 0.76
TDP1-206ENST00000553569 H3BN98 237 aa19.77■□□□□ 0.76
TDP1-206ENST00000553569 TP53P04637 393 aaPredicted RBP19.77■□□□□ 0.76
TDP1-206ENST00000553569 SCG5P05408 212 aa19.77■□□□□ 0.76
TDP1-206ENST00000553569 MMP7P09237 267 aaPredicted RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms