RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 REV1Q9UBZ9 1251 aa11.15□□□□□ -0.62
ACTN1-207ENST00000553290 EGFL7Q9UHF1 273 aa11.15□□□□□ -0.62
ACTN1-207ENST00000553290 SAMD4AQ9UPU9 718 aaKnown RBP11.15□□□□□ -0.62
ACTN1-207ENST00000553290 TMEM5Q9Y2B1 443 aa11.15□□□□□ -0.62
ACTN1-207ENST00000553290 FAM32AQ9Y421 112 aaKnown RBP11.15□□□□□ -0.62
ACTN1-207ENST00000553290 IGFBP1P08833 259 aaPredicted RBP11.14□□□□□ -0.63
ACTN1-207ENST00000553290 MMP7P09237 267 aaPredicted RBP11.14□□□□□ -0.63
ACTN1-207ENST00000553290 IGHV4-31P0DP07 118 aa11.14□□□□□ -0.63
ACTN1-207ENST00000553290 RHCEP18577 417 aa11.14□□□□□ -0.63
ACTN1-207ENST00000553290 GIFP27352 417 aa11.14□□□□□ -0.63
ACTN1-207ENST00000553290 CDAP32320 146 aa11.14□□□□□ -0.63
ACTN1-207ENST00000553290 APLNRP35414 380 aa11.14□□□□□ -0.63
ACTN1-207ENST00000553290 RAD52P43351 418 aa11.14□□□□□ -0.63
ACTN1-207ENST00000553290 HSF2Q03933 536 aa11.14□□□□□ -0.63
ACTN1-207ENST00000553290 FMODQ06828 376 aa11.14□□□□□ -0.63
ACTN1-207ENST00000553290 FHL1Q13642 323 aa11.14□□□□□ -0.63
ACTN1-207ENST00000553290 SGCAQ16586 387 aa11.14□□□□□ -0.63
ACTN1-207ENST00000553290 IQCCQ4KMZ1 466 aa11.14□□□□□ -0.63
ACTN1-207ENST00000553290 RGS7BPQ6MZT1 257 aaPredicted RBP11.14□□□□□ -0.63
ACTN1-207ENST00000553290 TBPL2Q6SJ96 375 aa11.14□□□□□ -0.63
ACTN1-207ENST00000553290 IGFN1Q86VF2 1251 aa11.14□□□□□ -0.63
ACTN1-207ENST00000553290 ZNF786Q8N393 782 aa11.14□□□□□ -0.63
ACTN1-207ENST00000553290 ZNF519Q8TB69 540 aa11.14□□□□□ -0.63
ACTN1-207ENST00000553290 UBASH3BQ8TF42 649 aa11.14□□□□□ -0.63
ACTN1-207ENST00000553290 NSMAFQ92636 917 aa11.14□□□□□ -0.63
ACTN1-207ENST00000553290 NABP1Q96AH0 204 aa11.14□□□□□ -0.63
ACTN1-207ENST00000553290 TSPAN32Q96QS1 320 aa11.14□□□□□ -0.63
ACTN1-207ENST00000553290 SYT3Q9BQG1 590 aa11.14□□□□□ -0.63
ACTN1-207ENST00000553290 BCL2L14Q9BZR8 327 aa11.14□□□□□ -0.63
ACTN1-207ENST00000553290 BPESC1Q9GZL8 116 aa11.14□□□□□ -0.63
ACTN1-207ENST00000553290 NDEL1Q9GZM8 345 aa11.14□□□□□ -0.63
ACTN1-207ENST00000553290 CCNB1IP1Q9NPC3 277 aa11.14□□□□□ -0.63
ACTN1-207ENST00000553290 DCAF13Q9NV06 445 aaKnown RBP11.14□□□□□ -0.63
ACTN1-207ENST00000553290 TMEM160Q9NX00 188 aa11.14□□□□□ -0.63
ACTN1-207ENST00000553290 ADAM21Q9UKJ8 722 aa11.14□□□□□ -0.63
ACTN1-207ENST00000553290 UGT2A1Q9Y4X1 527 aa11.14□□□□□ -0.63
ACTN1-207ENST00000553290 IGKV1D-43A0A0B4J1Z2 117 aa11.13□□□□□ -0.63
ACTN1-207ENST00000553290 A0A1W2PRQ8 180 aa11.13□□□□□ -0.63
ACTN1-207ENST00000553290 H1F0P07305 194 aaKnown RBP11.13□□□□□ -0.63
ACTN1-207ENST00000553290 FAM157BP0CG42 384 aa11.13□□□□□ -0.63
ACTN1-207ENST00000553290 CCL2P13500 99 aa11.13□□□□□ -0.63
ACTN1-207ENST00000553290 APEHP13798 732 aaKnown RBP11.13□□□□□ -0.63
ACTN1-207ENST00000553290 ZNF23P17027 643 aa11.13□□□□□ -0.63
ACTN1-207ENST00000553290 RPL4P36578 427 aaKnown RBP11.13□□□□□ -0.63
ACTN1-207ENST00000553290 GPR4P46093 362 aa11.13□□□□□ -0.63
ACTN1-207ENST00000553290 UCP2P55851 309 aa11.13□□□□□ -0.63
ACTN1-207ENST00000553290 DGCR6Q14129 220 aa11.13□□□□□ -0.63
ACTN1-207ENST00000553290 CHRFAM7AQ494W8 412 aa11.13□□□□□ -0.63
ACTN1-207ENST00000553290 ZBED5Q49AG3 693 aa11.13□□□□□ -0.63
ACTN1-207ENST00000553290 PABPC1L2AQ5JQF8 200 aa11.13□□□□□ -0.63
ACTN1-207ENST00000553290 FAM27BQ5VT28 67 aa11.13□□□□□ -0.63
ACTN1-207ENST00000553290 TSEN54Q7Z6J9 526 aaKnown RBP11.13□□□□□ -0.63
ACTN1-207ENST00000553290 LRP11Q86VZ4 500 aa11.13□□□□□ -0.63
ACTN1-207ENST00000553290 MEX3DQ86XN8 651 aaKnown RBP11.13□□□□□ -0.63
ACTN1-207ENST00000553290 PAQR4Q8N4S7 273 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-207ENST00000553290 ARIH2OSQ8N7S6 290 aa11.13□□□□□ -0.63
ACTN1-207ENST00000553290 OR13C2Q8NGS9 318 aa11.13□□□□□ -0.63
ACTN1-207ENST00000553290 SLC7A13Q8TCU3 470 aa11.13□□□□□ -0.63
ACTN1-207ENST00000553290 C11orf40Q8WZ69 217 aa11.13□□□□□ -0.63
ACTN1-207ENST00000553290 TPK1Q9H3S4 243 aa11.13□□□□□ -0.63
ACTN1-207ENST00000553290 GORASP2Q9H8Y8 452 aa11.13□□□□□ -0.63
ACTN1-207ENST00000553290 NDUFAF4Q9P032 175 aa11.13□□□□□ -0.63
ACTN1-207ENST00000553290 DUSP13Q9UII6 198 aa11.13□□□□□ -0.63
ACTN1-207ENST00000553290 GPR160Q9UJ42 338 aa11.13□□□□□ -0.63
ACTN1-207ENST00000553290 CDC42EP3Q9UKI2 254 aa11.13□□□□□ -0.63
ACTN1-207ENST00000553290 FZR1Q9UM11 496 aa11.13□□□□□ -0.63
ACTN1-207ENST00000553290 ARL2BPQ9Y2Y0 163 aa11.13□□□□□ -0.63
ACTN1-207ENST00000553290 RTTNQ86VV8 2226 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 IGHV4-61A0A0C4DH41 118 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 A0A1W2PPW3 197 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 KIAA1324LA8MWY0 1029 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-207ENST00000553290 XKRYO14609 159 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 CDC42EP2O14613 210 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 AHCYL1O43865 530 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 IFNA2P01563 188 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 LCKP06239 509 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 CD14P08571 375 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 CST2P09228 141 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 HSD17B1P14061 328 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 ZNF250P15622 560 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 ZNF16P17020 682 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-207ENST00000553290 ZNF32P17041 273 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 ITGA2P17301 1181 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 APEX1P27695 318 aaKnown RBP11.12□□□□□ -0.63
ACTN1-207ENST00000553290 ALDH3B1P43353 468 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 KLF3P57682 345 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-207ENST00000553290 PCBD1P61457 104 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 ERVK-25P63136 954 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 GNGT1P63211 74 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 KRT72Q14CN4 511 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 FAM166AQ6J272 317 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 PODNL1Q6PEZ8 512 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 FOXL2NBQ6ZUU3 175 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 ALDH16A1Q8IZ83 802 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 PGAM4Q8N0Y7 254 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 RNF148Q8N7C7 305 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 SYNPRQ8TBG9 265 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 C7orf34Q96L11 122 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 LRRC37BQ96QE4 947 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 KRCC1Q9NPI7 259 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms