RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 IER3IP1Q9Y5U9 82 aa10.2□□□□□ -0.78
TRAFD1-209ENST00000552896 ITPR3Q14573 2671 aa10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 BHLHE40O14503 412 aa10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 TMCC2O75069 709 aa10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 TIPRLO75663 272 aa10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 RAB36O95755 333 aa10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 CD79AP11912 226 aa10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 CD53P19397 219 aa10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 IDH3GP51553 393 aaPredicted RBP10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 NAAAQ02083 359 aa10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 NPRL3Q12980 569 aa10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 KEAP1Q14145 624 aa10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 ATP6AP1Q15904 470 aa10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 SLC36A2Q495M3 483 aa10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 SHQ1Q6PI26 577 aaKnown RBP10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 SLC22A25Q6T423 547 aa10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 PTCHD4Q6ZW05 846 aa10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 TMEM179BQ7Z7N9 219 aa10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 MYPOPQ86VE0 399 aaPredicted RBP10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 JAZF1Q86VZ6 243 aa10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 DEPDC4Q8N2C3 294 aa10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 OR8D4Q8NGM9 314 aa10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 DNAJC9Q8WXX5 260 aa10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 NSMAFQ92636 917 aa10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 GTPBP3Q969Y2 492 aaKnown RBP10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 NRBF2Q96F24 287 aa10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 ZNF75AQ96N20 296 aa10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 FEVQ99581 238 aa10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 CCL19Q99731 98 aa10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 KCNS3Q9BQ31 491 aa10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 PLA2G12AQ9BZM1 189 aa10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 SIAEQ9HAT2 523 aa10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 NOX3Q9HBY0 568 aa10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 PDP1Q9P0J1 537 aaPredicted RBP10.19□□□□□ -0.78
TRAFD1-209ENST00000552896 RTTNQ86VV8 2226 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 ATP6V1G2-DDX39BF2Z307 99 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 SOX14O95416 240 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 CRYAAP02489 173 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 TP53P04637 393 aaPredicted RBP10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 CELA3BP08861 270 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 CTLA4P16410 223 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 ZNF14P17017 642 aaPredicted RBP10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 MSR1P21757 451 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 NOS3P29474 1203 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 CDAP32320 146 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 PTDSS1P48651 473 aaKnown RBP10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 ACTR3P61158 418 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 COX10Q12887 443 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 CLEC12AQ5QGZ9 265 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 TMEM53Q6P2H8 277 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 DNM1P34Q6PK57 102 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 SLC16A14Q7RTX9 510 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 SKA3Q8IX90 412 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 LNX2Q8N448 690 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 IL17RDQ8NFM7 739 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 IGFBPL1Q8WX77 278 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 HTRA1Q92743 480 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 RAB3IPQ96QF0 476 aaPredicted RBP10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 SH3GL3Q99963 347 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 NIPSNAP1Q9BPW8 284 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 SYT4Q9H2B2 425 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 C1orf198Q9H425 327 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 SEC61A2Q9H9S3 476 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 FAIMQ9NVQ4 179 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 BEX4Q9NWD9 120 aaPredicted RBP10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 POU2F3Q9UKI9 436 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 BAIAP2Q9UQB8 552 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 AP4S1Q9Y587 144 aa10.18□□□□□ -0.78
TRAFD1-209ENST00000552896 USF3Q68DE3 2245 aa10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 IGHV2OR16-5A0A0B4J2B6 119 aa10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 A0A1W2PPL8 197 aa10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 RENP00797 406 aa10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 CST2P09228 141 aa10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 MMP7P09237 267 aaPredicted RBP10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 ANXA8P13928 327 aa10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 HIST1H1CP16403 213 aaKnown RBP10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 FASP25445 335 aa10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 CRABP1P29762 137 aa10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 CDKN2AP42771 156 aaKnown RBP10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 GUCA1AP43080 201 aaPredicted RBP10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 GIPRP48546 466 aa10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 ARHGDIAP52565 204 aa10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 RAB1AP62820 205 aa10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 FAM27BQ5VT28 67 aa10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 ZNF544Q6NX49 715 aa10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 LEG1Q6P5S2 330 aa10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 B3GLCTQ6Y288 498 aa10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 DTX2Q86UW9 622 aa10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 HS3ST5Q8IZT8 346 aa10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 NUP37Q8NFH4 326 aa10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 OR2T33Q8NG76 320 aa10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 TEX47Q8TBZ9 253 aa10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 NEUROG1Q92886 237 aa10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 PIGTQ969N2 578 aa10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 BDH2Q9BUT1 245 aa10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 RACGAP1Q9H0H5 632 aa10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 KCNN2Q9H2S1 579 aa10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 ZNF556Q9HAH1 456 aa10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 NTN4Q9HB63 628 aa10.17□□□□□ -0.78
TRAFD1-209ENST00000552896 CCNB1IP1Q9NPC3 277 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms